Projects: bioconductor: UNDO
https://packages.ecosyste.ms/registries/bioconductor.org/packages/UNDO
Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions
1 version
Latest release: over 2 years ago
14,550 downloads total
Science Score: 93/100
Starting Score: 100 points
Bonuses:
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+8
Academic maintainer emails
1 maintainers with academic email addresses
Penalties:
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-15
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Very Likely Science (93)
Papers Mentioning UNDO 5
10.3389/fgene.2019.01200
Dysregulation of MicroRNA Regulatory Network in Lower Extremities Arterial DiseaseCited by: 22
Author(s): Anna Bogucka‐Kocka, Daniel Zalewski, Karol P Ruszel, Andrzej Stępniewski, Dariusz Gałkowski, Jacek Bogucki, Łukasz Komsta, Przemysław Kołodziej, Tomasz Zubilewicz, Marcin Feldo, Janusz Kocki
Software Mentions: 12
Published: over 6 years ago
10.1371/journal.pcbi.1007510
CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression dataCited by: 39
Author(s): Kai Kang, Qian Meng, Igor Shats, David M. Umbach, Melissa Li, Yuanyuan Li, Xiaoling Li, Leping Li
Software Mentions: 4
Published: over 6 years ago
10.3389/fgene.2018.00321
DECtp: Calling Differential Gene Expression Between Cancer and Normal Samples by Integrating Tumor Purity InformationCited by: 7
Author(s): Weiwei Zhang, Hang Long, Binsheng He, Jialiang Yang
Software Mentions: 4
Published: almost 8 years ago
10.1186/s12859-021-04187-4
A novel method for predicting cell abundance based on single-cell RNA-seq dataCited by: 7
Author(s): Jiajie Peng, Lu Han, Xuequn Shang
Software Mentions: 2
Published: almost 5 years ago
10.1038/srep13955
BACOM2.0 facilitates absolute normalization and quantification of somatic copy number alterations in heterogeneous tumorCited by: 6
Author(s): Yi Fu, Guoqiang Yu, Douglas A. Levine, Niya Wang, Ie Ming Shih, Zhen Zhang, Robert Clarke, Yue Wang
Software Mentions: 2
Published: over 10 years ago