Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: UNDO

https://packages.ecosyste.ms/registries/bioconductor.org/packages/UNDO

Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions
1 version
Latest release: 10 months ago
14,550 downloads total

Papers Mentioning UNDO 5

Dysregulation of MicroRNA Regulatory Network in Lower Extremities Arterial Disease
Cited by: 22
Author(s): Anna Bogucka‐Kocka, Daniel Zalewski, Karol P Ruszel, Andrzej Stępniewski, Dariusz Gałkowski, Jacek Bogucki, Łukasz Komsta, Przemysław Kołodziej, Tomasz Zubilewicz, Marcin Feldo, Janusz Kocki
Software Mentions: 12
Published: over 4 years ago

10.1371/journal.pcbi.1007510

CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression data
Cited by: 39
Author(s): Kai Kang, Qian Meng, Igor Shats, David M. Umbach, Melissa Li, Yuanyuan Li, Xiaoling Li, Leping Li
Software Mentions: 4
Published: over 4 years ago

10.3389/fgene.2018.00321

DECtp: Calling Differential Gene Expression Between Cancer and Normal Samples by Integrating Tumor Purity Information
Cited by: 7
Author(s): Weiwei Zhang, Hang Long, Binsheng He, Jialiang Yang
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12859-021-04187-4

A novel method for predicting cell abundance based on single-cell RNA-seq data
Cited by: 7
Author(s): Jiajie Peng, Lu Han, Xuequn Shang
Software Mentions: 2
Published: almost 3 years ago

10.1038/srep13955

BACOM2.0 facilitates absolute normalization and quantification of somatic copy number alterations in heterogeneous tumor
Cited by: 6
Author(s): Yi Fu, Guoqiang Yu, Douglas A. Levine, Niya Wang, Ie Ming Shih, Zhen Zhang, Robert Clarke, Yue Wang
Software Mentions: 2
Published: almost 9 years ago