Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: Rsubread

https://packages.ecosyste.ms/registries/bioconductor.org/packages/Rsubread

Mapping, quantification and variant analysis of sequencing data
2 versions
Latest release: about 1 year ago
14 dependent packages
287,298 downloads total

Papers Mentioning Rsubread 331

10.3390/cells10040876
Stability of Imprinting and Differentiation Capacity in Naïve Human Cells Induced by Chemical Inhibition of CDK8 and CDK19
Cited by: 0
Author(s): Raquel Bernad, Cian J. Lynch, Rocío G. Urdinguio, Camille Stephan‐Otto Attolini, Mario F. Fraga, Manuel Serrano
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-019-51379-3
Tissue- and Species-Specific Patterns of RNA metabolism in Post-Mortem Mammalian Retina and Retinal Pigment Epithelium
Cited by: 9
Author(s): Les Kallestad, Seth Blackshaw, Ahmad M. Khalil, Krzysztof Palczewski
Software Mentions: 5
Published: about 5 years ago
10.1371/journal.pone.0075578
Role of Alternative Polyadenylation during Adipogenic Differentiation: An In Silico Approach
Cited by: 7
Author(s): Lucía Spangenberg, Alejandro Correa, Bruno Dallagiovanna, Hugo Naya
Software Mentions: 5
Published: about 11 years ago
10.7150/jca.29958
TGFBI Promotes Tumor Growth and is Associated with Poor Prognosis in Oral Squamous Cell Carcinoma
Cited by: 16
Author(s): Bingjie Wang, Kun-Ping Chi, Ruling Shen, Saiwei Zheng, Yang Guo, Jianfeng Li, Jian Fei, Yuan He
Software Mentions: 5
Published: almost 6 years ago
10.1186/s12974-017-0834-5
Myeloid C/EBPβ deficiency reshapes microglial gene expression and is protective in experimental autoimmune encephalomyelitis
Cited by: 17
Author(s): Marta Pulido-Salgado, José M. Vidal-Taboada, Gerardo Garcıa-Dıaz Barriga, Joan Serratosa, Tony Valente, Paola Castillo, Jonathan Matalonga, Marco Straccia, Josep M. Canals, Annabel F. Valledor, Carme Solà, Josep Saura
Software Mentions: 5
Published: over 7 years ago
10.1002/evl3.166
Artificial selection reveals the role of transcriptional constraints in the maintenance of life history variation
Cited by: 6
Author(s): Joel L. Pick, Masaomi Hatakeyama, Kate E. Ihle, Julien Gasparini, Claudy Haussy, Satoshi Ishishita, Yoichi Matsuda, Takashi Yoshimura, Masahiro M. Kanaoka, Rie Shimizu‐Inatsugi, Kentaro Shimizu, Barbara Tschirren
Software Mentions: 5
Published: over 4 years ago
10.1186/s12864-019-5496-5
OMICfpp: a fuzzy approach for paired RNA-Seq counts
Cited by: 1
Author(s): Alberto Berral-González, Ángela L. Riffo‐Campos, Guillermo Ayala
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pone.0226575
Neuronal and glial DNA methylation and gene expression changes in early epileptogenesis
Cited by: 17
Author(s): Toni Berger, Magnus Dehli Vigeland, Hanne Sagsveen Hjorthaug, Lars Etholm, Cecilie G. Nome, Erik Taubøll, Kjell Heuser, Kaja Kristine Selmer
Software Mentions: 5
Published: almost 5 years ago
10.7554/eLife.58305
Damage-responsive, maturity-silenced enhancers regulate multiple genes that direct regeneration in Drosophila
Cited by: 38
Author(s): Robin E. Harris, Michael J. Stinchfield, Spencer L. Nystrom, Daniel J. McKay, Iswar K. Hariharan
Software Mentions: 5
Published: over 4 years ago
10.1038/s41598-019-45515-2
Open chromatin dynamics in prosensory cells of the embryonic mouse cochlea
Cited by: 13
Author(s): Brent A. Wilkerson, Alex Chitsazan, Leah S. VandenBosch, Matthew S. Wilken, Thomas A. Reh, Olivia Bermingham‐McDonogh
Software Mentions: 5
Published: over 5 years ago
10.3390/ijms22062901
Age and Sex-Related Changes in Human First-Trimester Placenta Transcriptome and Insights into Adaptative Responses to Increased Oxygen
Cited by: 7
Author(s): Fulin Liu, Christelle Simasotchi, Françoise Vibert, Wencan Zhu, Sophie Gil, Séverine A. Degrelle, Thierry Fournier
Software Mentions: 5
Published: over 3 years ago
10.1038/s41396-020-0606-6
Genetic variation and evolutionary history of a mycorrhizal fungus regulate the currency of exchange in symbiosis with the food security crop cassava
Cited by: 12
Author(s): Romain Savary, Cindy Dupuis, Frédéric G. Masclaux, Ivan D. Mateus, Edward C. Rojas, Ian R. Sanders
Software Mentions: 5
Published: almost 5 years ago
10.3390/genes12020201
Ablation of SMUG1 Reduces Cell Viability and Increases UVC-Mediated Apoptosis in Hepatocarcinoma HepG2 Cells
Cited by: 1
Author(s): Mi-Jin An, Geun-Seup Shin, Hyun-Min Lee, Jung-Woong Kim
Software Mentions: 5
Published: almost 4 years ago
10.1371/journal.pcbi.1006794
A complete statistical model for calibration of RNA-seq counts using external spike-ins and maximum likelihood theory
Cited by: 7
Author(s): Rodoniki Athanasiadou, Benjamin Neymotin, Nathan Brandt, Wei Wang, Lionel Christiaen, David Gresham, Daniel Tranchina
Software Mentions: 5
Published: over 5 years ago
10.1007/s12011-019-01850-z
MCHM Acts as a Hydrotrope, Altering the Balance of Metals in Yeast
Cited by: 4
Author(s): Amaury Pupo, Michael C. Ayers, Zachary Sherman, Rachel J. Vance, Jonathan R. Cumming, Jennifer E. G. Gallagher
Software Mentions: 5
Published: over 5 years ago
10.1128/mBio.03042-19
Quantitative Framework for Model Evaluation in Microbiology Research Using <i>Pseudomonas aeruginosa</i> and Cystic Fibrosis Infection as a Test Case
Cited by: 83
Author(s): Daniel M. Cornforth, Frances L. Diggle, Jeffrey A. Melvin, Jennifer M. Bomberger, Marvin Whiteley
Software Mentions: 5
Published: over 4 years ago
10.1002/glia.23615
Genetic control of cellular morphogenesis in Müller glia
Cited by: 18
Author(s): Mark Charlton‐Perkins, Alexandra D. Almeida, R. Macdonald, William A. Harris
Software Mentions: 5
Published: over 5 years ago
10.1053/j.gastro.2020.09.043
Targeting DNA Damage Response and Replication Stress in Pancreatic Cancer
Cited by: 73
Author(s): Stephan Dreyer, Rosanna Upstill-Goddard, Viola Paulus-Hock, Clara Paris, Eirini-Maria Lampraki, Eloïse Dray, Bryan Serrels, Giuseppina Caligiuri, Selma Rebus, Dennis Plenker, Zachary Galluzzo, Holly Brunton, Richard Cunningham, Mathias Tesson, Craig Nourse, Ulla-Maja Bailey, Marc D. Jones, Kim Moran-Jones, Derek W. Wright, Fraser Duthie, Karin A. Oien, Lisa Evers, Colin McKay, Grant A. McGregor, Aditi Gulati, Rachel Brough, Ilirjana Bajrami, Stephen J. Pettitt, Michele L. Dziubinski, Juliana Candido, Frances R. Balkwill, Simon T. Barry, Robert Grützmann, Lola Rahib, Amber Johns, Marina Pajic, Fieke E. M. Froeling, Philip Beer, Elizabeth A. Musgrove, Gloria M. Petersen, Alan Ashworth, Margaret C. Frame, Howard C. Crawford, Diane M. Simeone, Chris Lord, Debabrata Mukhopadhyay, Christian Pilarsky, David A. Tuveson, Susanna L. Cooke, Nigel B. Jamieson, Jennifer P. Morton, Owen J. Sansom, Peter J. Bailey, Andrew V. Biankin, David K. Chang, Sarah E. Allison, Peter J. Bailey, Ulla-Maja Bailey, Andrew V. Biankin, Dario Beraldi, Holly Brunton, Giuseppina Caligiuri, Euan Cameron, David K. Chang, Susanna L. Cooke, Richard Cunningham, Stephan Dreyer, Paul Grimwood, Shane Kelly, Eirini-Maria Lampraki, John L. Marshall, Sancha Martin, Brian McDade, Daniel L. McElroy, Elizabeth A. Musgrove, Craig Nourse, Viola Paulus-Hock, Donna T. Ramsay, Rosanna Upstill-Goddard, Derek W. Wright, Marc D. Jones, Lisa Evers, Selma Rebus, Lola Rahib, Bryan Serrels, Jane Hair, Nigel B. Jamieson, Colin McKay, Paul Westwood, Nicola Williams, Fraser Duthie, Andrew V. Biankin, Amber Johns, Amanda Mawson, David K. Chang, Christopher J. Scarlett, Mary-Anne L. Brancato, Sarah J. Rowe, Skye Simpson, Mona Martyn-Smith, Michelle T. Thomas, Lorraine A. Chantrill, Venessa T. Chin, Angela Chou, Mark J. Cowley, Jeremy L. Humphris, Marc D. Jones, R. Scott Mead, Adnan Nagrial, Marina Pajic, Jessica Pettit, Mark Pinese, Ilse Rooman, Jianmin Wu, Tao Jiang, Renee DiPietro, Clare Watson, Angela Steinmann, Hong Ching Lee, Rachel Wong, Andreia V. Pinho, Marc Giry-Laterrière, Roger J. Daly, Elizabeth A. Musgrove, Robert L. Sutherland, Sean M. Grimmond, Nicola Waddell, Karin S. Kassahn, David Miller, Peter J. Wilson, Ann‐Marie Patch, Sarah Song, Ivon Harliwong, Senel Idrisoglu, Craig Nourse, Ehsan Nourbakhsh, Suzanne Manning, Shivangi Wani, Milena Gongora, Matthew Anderson, Oliver Holmes, Conrad Leonard, Darrin Taylor, Scott Wood, Christina Xu, Kátia Nones, J. Lynn Fink, Angelika N. Christ, Tim Bruxner, Nicole Cloonan, Felicity Newell, John V. Pearson, Peter J. Bailey, Michael C. Quinn, Shivashankar H. Nagaraj, Stephen H. Kazakoff, Nick M. Waddell, Keerthana Krisnan, Kelly Quek, David Wood, Jaswinder S. Samra, Anthony J. Gill, Nick Pavlakis, Alex Guminski, Christopher W. Toon, Ray Asghari, Neil D. Merrett, Darren Pavey, Amitabha Das, Peter H. Cosman, Kasim Ismail, Chelsie O’Connnor, Vincent Lam, Duncan McLeod, Henry Pleass, A. J. Richardson, Virginia James, James G. Kench, Caroline Cooper, David Joseph, Charbel Sandroussi, Michael Crawford, James Gallagher, Michael Texler, Cindy Forest, Andrew Laycock, Krishna Epari, Mo Ballal, David Fletcher, Sanjay Mukhedkar, Nigel Spry, Bastiaan DeBoer, Ming Gene Chai, Nikolajs Zeps, Maria Beilin, Kynan Feeney, Nan Q. Nguyen, Andrew Ruszkiewicz, Chris Worthley, Chuan Ping Tan, Tamara Debrencini, John Chen, Mark E. Brooke-Smith, Virginia Papangelis, H.H.K. Tang, Andrew P. Barbour, Andrew D. Clouston, Patrick Martin, Thomas O’Rourke, Amy Chiang, J. Fawcett, Kellee Slater, Shinn Yeung, Michael Hatzifotis, Peter Hodgkinson, Christopher Christophi, Mehrdad Nikfarjam, A. Mountain, Victorian Cancer Biobank, James R. Eshleman, Ralph H. Hruban, Anirban Maitra, Christine A. Iacobuzio‐Donahue, Richard D. Schulick, Christopher L. Wolfgang, Richard A. Morgan, Mary Hodgin, Aldo Scarpa, Rita T. Lawlor, Stefania Beghelli, Vincenzo Corbo, Maria Scardoni, Claudio Bassi, Margaret A. Tempero, Andrew V. Biankin, Sean M. Grimmond, David K. Chang, Elizabeth A. Musgrove, Marc D. Jones, Craig Nourse, Nigel B. Jamieson, Janet Graham, Andrew V. Biankin, David K. Chang, Nigel B. Jamieson, Janet Graham
Software Mentions: 5
Published: almost 4 years ago
10.3390/genes12020264
Bisphenol A Exposure Changes the Transcriptomic and Proteomic Dynamics of Human Retinoblastoma Y79 Cells
Cited by: 7
Author(s): Chulhong Kim, Mi Jin Kim, Jin‐Hong Park, Jin-Ho Kim, Jiyoung Kim, Mi-Jin An, Geun-Seup Shin, Hyun-Min Lee, Jung-Woong Kim
Software Mentions: 5
Published: almost 4 years ago
10.3389/fcimb.2021.641261
Common Dysregulation of Innate Immunity Pathways in Human Primary Astrocytes Infected With Chikungunya, Mayaro, Oropouche, and Zika Viruses
Cited by: 5
Author(s): Victor Emmanuel Viana Geddes, Otávio J. B. Brustolini, Liliane Tavares de Faria Cavalcante, Filipe Romero Rebello Moreira, Fernando Luz de Castro, Ana P. Guimarães, Alexandra Lehmkuhl Gerber, C. Figueiredo, Luan Pereira Diniz, Eurico de Arruda Neto, Amílcar Tanuri, Renan Pedra de Souza, Iranaia Assunção‐Miranda, Soniza Vieira Alves-Leon, Luciana Romão, Jorge Paes Barreto Marcondes de Souza, Ana Tereza Ribeiro de Vasconcelos, Renato Santana Aguiar
Software Mentions: 5
Published: over 3 years ago
10.1073/pnas.2110758118
TET2 as a tumor suppressor and therapeutic target in T-cell acute lymphoblastic leukemia
Cited by: 22
Author(s): Maike Bensberg, Olof Rundquist, Aida Selimović, Cathrine Lagerwall, Mikael Benson, Mika Gustafsson, Hartmut Vogt, Antonio Lentini, Colm E. Nestor
Software Mentions: 5
Published: over 3 years ago
10.3390/cancers12061487
Only Hematopoietic Stem and Progenitor Cells from Cord Blood Are Susceptible to Malignant Transformation by MLL-AF4 Translocations
Cited by: 12
Author(s): Kathy-Ann Secker, Lukas Bruns, Hildegard Keppeler, Johan Jeong, Thomas Hentrich, Julia M. Schulze‐Hentrich, Barbara Mankel, Falko Fend, Dominik Schneidawind, Corina Schneidawind
Software Mentions: 5
Published: over 4 years ago
10.1016/j.molmet.2019.12.006
Single-cell ATAC-Seq in human pancreatic islets and deep learning upscaling of rare cells reveals cell-specific type 2 diabetes regulatory signatures
Cited by: 91
Author(s): Vivek Rai, Daniel Quang, Michael R. Erdos, Darren A. Cusanovich, Riza M. Daza, Narisu Narisu, Luli S. Zou, John P. Didion, Yuanfang Guan, Jay Shendure, Stephen C. J. Parker, Francis S. Collins
Software Mentions: 4
Published: almost 5 years ago
10.1038/s41598-020-79619-x
Identification of loci associated with susceptibility to bovine paratuberculosis and with the dysregulation of the MECOM, eEF1A2, and U1 spliceosomal RNA expression
Cited by: 9
Author(s): María Canive, Nora Fernández-Jiménez, Rosa Casáis, Patricia Vázquez, José L. Lavín, José Ramón Bilbao, Cristina Blanco‐Vázquez, Joseba M. Garrido, Ramón A. Juste, Marta Alonso‐Hearn
Software Mentions: 4
Published: almost 4 years ago
10.3389/fpls.2021.727302
Identification of Genes and MicroRNAs Affecting Pre-harvest Sprouting in Rice (Oryza sativa L.) by Transcriptome and Small RNAome Analyses
Cited by: 4
Author(s): Minsu Park, Wookap Choi, Sang Yoon Shin, Hongman Moon, Dowhan Lee, Yun Shil Gho, Ki Hong Jung, Jong Seong Jeon, Chanseok Shin
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-019-52841-y
Prospective validation in epithelial tumors of a gene expression predictor of liver metastasis derived from uveal melanoma
Cited by: 3
Author(s): Petros Tsantoulis, Mauro Delorenzi, Ivan Bièche, Sophie Vacher, Pascale Mariani, Nathalie Cassoux, Alexandre Houy, Marc‐Henri Stern, Sergio Román-Román, Pierre‐Yves Dietrich, Arnaud Roth, Wulfran Cacheux
Software Mentions: 4
Published: about 5 years ago
10.3390/genes10020089
A 24 h Age Difference Causes Twice as Much Gene Expression Divergence as 100 Generations of Adaptation to a Novel Environment
Cited by: 12
Author(s): Sheng‐Kai Hsu, Ana Marija Jakšić, Viola Nolte, Neda Barghi, François Mallard, Kerstin Otte, Christian Schlötterer
Software Mentions: 4
Published: almost 6 years ago
10.3390/genes11091049
The Transcriptomic Landscape of Cupriavidus metallidurans CH34 Acutely Exposed to Copper
Cited by: 3
Author(s): Laurens Maertens, Natalie Leys, Jean-Yves Matroule, Rob Van Houdt
Software Mentions: 4
Published: about 4 years ago
10.3390/genes12081258
Systematic Identification of circRNAs in Alzheimer’s Disease
Cited by: 9
Author(s): Kyle R. Cochran, Kirtana Veeraraghavan, Gautam Kundu, Krystyna Mazan-Mamczarz, Christopher Coletta, Madhav Thambisetty, Myriam Gorospe, Supriyo De
Software Mentions: 4
Published: over 3 years ago
10.1186/s13059-018-1503-4
A simple genetic basis of adaptation to a novel thermal environment results in complex metabolic rewiring in Drosophila
Cited by: 61
Author(s): François Mallard, Viola Nolte, Raymond Tobler, Martin Kapun, Christian Schlötterer
Software Mentions: 4
Published: over 6 years ago
10.3390/ijms20204983
Methionine Adenosyltransferase 1a (MAT1A) Enhances Cell Survival During Chemotherapy Treatment and is Associated with Drug Resistance in Bladder Cancer PDX Mice
Cited by: 10
Author(s): Kelly A. Martin, Nicholas R. Hum, Aimy Sebastian, Wei He, Salma Siddiqui, Paramita M. Ghosh, Chong Xian Pan, Ralph de Vere White, Gabriela G. Loots
Software Mentions: 4
Published: about 5 years ago
10.1371/journal.pbio.2004986
Canonical PRC2 function is essential for mammary gland development and affects chromatin compaction in mammary organoids
Cited by: 10
Author(s): Ewa M. Michalak, Michael J. G. Milevskiy, Rachel Joyce, Johanna F. Dekkers, Paul Jamieson, Bhupinder Pal, Caleb A. Dawson, Yifang Hu, Stuart H. Orkin, Warren S. Alexander, Geoffrey J. Lindeman, Gordon K. Smyth, Jane E. Visvader
Software Mentions: 4
Published: over 6 years ago
10.1172/jci.insight.142980
Treating ICB-resistant glioma with anti-CD40 and mitotic spindle checkpoint controller BAL101553 (lisavanbulin)
Cited by: 5
Author(s): Vassilis Genoud, Felipe I Espinoza, Eliana Marinari, Viviane Rochemont, Pierre‐Yves Dietrich, Paul M.J. McSheehy, Felix Bachmann, Heidi A. Lane, Paul R Walker
Software Mentions: 4
Published: about 3 years ago
10.1371/journal.ppat.1006084
Microbial Community Composition Impacts Pathogen Iron Availability during Polymicrobial Infection
Cited by: 24
Author(s): Apollo Stacy, Nader Abraham, Peter Jorth, Marvin Whiteley
Software Mentions: 4
Published: almost 8 years ago
10.1371/journal.ppat.1006348
HIV-1 competition experiments in humanized mice show that APOBEC3H imposes selective pressure and promotes virus adaptation
Cited by: 32
Author(s): Yoshiaki Nakano, Naoko Misawa, Guillermo Juarez-Fernandez, Miyu Moriwaki, Shinji Nakaoka, Takaaki Funo, Eri Yamada, Andrew Soper, Rokusuke Yoshikawa, Diako Ebrahimi, Yuuya Tachiki, Shingo Iwami, Reuben S. Harris, Yoshio Koyanagi, Kei Sato
Software Mentions: 4
Published: over 7 years ago
10.1186/s12977-020-00544-y
Comparative analysis of human microglial models for studies of HIV replication and pathogenesis
Cited by: 34
Author(s): Ammara Mohammad, J. Hammonds, Mario Pujato, Christopher N. Mayhew, Krishna M. Roskin, Paul Spearman
Software Mentions: 4
Published: about 4 years ago
10.1186/s12864-017-4214-4
Metabolic differentiation of surface and invasive cells of yeast colony biofilms revealed by gene expression profiling
Cited by: 13
Author(s): Jana Maršíková, Derek Wilkinson, Otakar Hlaváček, Gregor D. Gilfillan, Alexandru Mizeranschi, Timothy R. Hughes, Markéta Begany, Stanislava Rešetárová, Libuše Váchová, Zdena Palková
Software Mentions: 4
Published: about 7 years ago
10.1371/journal.pgen.1005755
Preferential Allele Expression Analysis Identifies Shared Germline and Somatic Driver Genes in Advanced Ovarian Cancer
Cited by: 12
Author(s): Najeeb Halabi, Alejandra Martinez, Halema Al-Farsi, Eliane Mery-Lamarche, Laurence Puydenus, Pascal Pujol, Hanif Khalak, Cameron Mclurcan, Gwénaël Ferron, Denis Querleu, Iman K. Al-Azwani, Eman K. Al-Dous, Yasmin Ali Mohamoud, Joel A. Malek, Arash Rafii
Software Mentions: 4
Published: almost 9 years ago
10.1371/journal.pgen.1008253
A Cyclin A—Myb-MuvB—Aurora B network regulates the choice between mitotic cycles and polyploid endoreplication cycles
Cited by: 24
Author(s): Michael D. Rotelli, Robert A. Policastro, Anna M. Bolling, Andrew W. Killion, Abraham J. Weinberg, Michael J. Dixon, Gabriel E. Zentner, Claire Walczak, Mary A. Lilly, Brian R. Calvi
Software Mentions: 4
Published: over 5 years ago
10.1186/s12864-019-5970-0
Single-cell RNA-seq of esophageal squamous cell carcinoma cell line with fractionated irradiation reveals radioresistant gene expression patterns
Cited by: 22
Author(s): Ling Yang, Xiaoyan Zhang, Qiang Hou, Ming Huang, Hongfang Zhang, Zhenzhen Jiang, Jing Yue, Shixiu Wu
Software Mentions: 4
Published: over 5 years ago
10.1186/s12916-020-01605-x
Circulating mRNAs are differentially expressed in pregnancies with severe placental insufficiency and at high risk of stillbirth
Cited by: 23
Author(s): Natalie J. Hannan, Owen Stock, Rebecca Spencer, Clare Whitehead, Anna L. David, Katie Groom, Scott Petersen, Amanda Henry, Joanne Said, Sean Seeho, Stefan C. Kane, Lavinia Gordon, Sally Beard, Kantaraja Chindera, Smita T. Karegodar, Richard Hiscock, Natasha Pritchard, Tu’uhevaha J Kaitu’u-Lino, Susan Walker, Stephen Tong
Software Mentions: 4
Published: over 4 years ago
10.3390/ijms20143480
Discovering and Constructing ceRNA-miRNA-Target Gene Regulatory Networks during Anther Development in Maize
Cited by: 34
Author(s): Ziwen Li, Xianghai An, Taotao Zhu, Tingwei Yan, Wu Shu, Youhui Tian, Jinping Li, Xiangyuan Wan
Software Mentions: 4
Published: over 5 years ago
10.1371/journal.pone.0236679
Characterisation of protein isoforms encoded by the Drosophila Glycogen Synthase Kinase 3 gene shaggy
Cited by: 4
Author(s): Dagmara Korona, Daniel J.H. Nightingale, Bertrand Fabre, Michael G. Nelson, Bettina Fischer, Glynnis Johnson, Jonathan G. Lees, Simon J. Hubbard, Kathryn S. Lilley, Steven Russell
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0191338
Gene expression profiling in a mouse model of retinal vein occlusion induced by laser treatment reveals a predominant inflammatory and tissue damage response
Cited by: 12
Author(s): Gottfried Martin, David Conrad, Bertan Cakir, Günther Schlunck, Hansjürgen Agostini
Software Mentions: 4
Published: over 6 years ago
10.1128/MCB.00668-17
The <i>Caenorhabditis elegans</i> Ortholog of TDP-43 Regulates the Chromatin Localization of the Heterochromatin Protein 1 Homolog HPL-2
Cited by: 12
Author(s): Tassa Saldi, Patrick Gonzales, Alfonso Garrido-Lecca, Vishantie Dostal, Christine M. Roberts, Leonard Petrucelli, Christopher D. Link
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0218899
Hybrid gene misregulation in multiple developing tissues within a recent adaptive radiation of Cyprinodon pupfishes
Cited by: 16
Author(s): Joseph A. McGirr, Christopher H. Martin
Software Mentions: 4
Published: over 5 years ago
10.1002/cam4.3915
The debatable presence of PIWI‐interacting RNAs in invasive breast cancer
Cited by: 11
Author(s): Elisa Kärkkäinen, Sami Heikkinen, Maria Tengström, Veli‐Matti Kosma, Arto Mannermaa, Jaana M. Hartikainen
Software Mentions: 4
Published: over 3 years ago
10.1186/s12864-020-07100-0
Comparative genomics and community curation further improve gene annotations in the nematode Pristionchus pacificus
Cited by: 16
Author(s): Marina Athanasouli, Hanh Witte, Christian Weiler, Tobias Loschko, Gabi Eberhardt, Ralf J. Sommer, Christian Rödelsperger
Software Mentions: 4
Published: about 4 years ago
10.1128/AEM.02177-20
Identification of Natural Mutations Responsible for Altered Infection Phenotypes of Salmonella enterica Clinical Isolates by Using Cell Line Infection Screens
Cited by: 5
Author(s): Rafał Kolenda, Michał Burdukiewicz, Marcjanna Wimonć, Adrianna Aleksandrowicz, Aamir Ali, István Szabó, Karsten Tedin, Josefin Bartholdson Scott, Derek Pickard, Peter Schierack
Software Mentions: 4
Published: almost 4 years ago
10.3390/cancers12082003
Methylation Patterns and Chromatin Accessibility in Neuroendocrine Lung Cancer
Cited by: 5
Author(s): Elsa Arbajian, Mattias Aine, Anna Karlsson, Johan Vallon‐Christersson, Hans Brunnström, Josef Davidsson, Sofie Mohlin, Maria Planck, Johan Staaf
Software Mentions: 4
Published: over 4 years ago
10.1186/s13024-020-00394-4
Trem2 deficiency differentially affects phenotype and transcriptome of human APOE3 and APOE4 mice
Cited by: 40
Author(s): Nicholas F. Fitz, Cody M. Wolfe, Brittany E. Playso, Richard J. Biedrzycki, Yi Lü, Kyong Nyon Nam, Iliya Lefterov, Radosveta Koldamova
Software Mentions: 4
Published: over 4 years ago
10.18632/oncotarget.26533
Imbalanced sphingolipid signaling is maintained as a core proponent of a cancerous phenotype in spite of metabolic pressure and epigenetic drift
Cited by: 5
Author(s): Monique M.P. Speirs, Adam Swensen, Tsz Yin Chan, Peter M. Jones, John C. Holman, McCall B. Harris, J. Alan Maschek, James E. Cox, Richard H. Carson, John E. Hill, Joshua L. Andersen, John T. Prince, John C. Price
Software Mentions: 4
Published: almost 6 years ago
10.3390/cells8121592
Dietary Immunostimulant CpG Modulates MicroRNA Biomarkers Associated with Immune Responses in Atlantic Salmon (Salmo salar)
Cited by: 22
Author(s): Xi Xue, Nardos Tesfaye Woldemariam, Albert Caballero‐Solares, Navaneethaiyer Umasuthan, Mark D. Fast, Richard G. Taylor, Matthew L. Rise, Rune Andreassen
Software Mentions: 4
Published: almost 5 years ago
10.3390/cells9051228
Knockdown of the Ribosomal Protein eL29 in Mammalian Cells Leads to Significant Changes in Gene Expression at the Transcription Level
Cited by: 8
Author(s): Alexander V. Gopanenko, Alena V. Kolobova, Mariya I. Meschaninova, Alya G. Venyaminova, Alexey E. Tupikin, Мarsel R. Kabilov, Alexey A. Malygin, Г. Г. Карпова
Software Mentions: 4
Published: over 4 years ago
10.7554/eLife.30657
Wilms Tumor 1b defines a wound-specific sheath cell subpopulation associated with notochord repair
Cited by: 21
Author(s): Juan Carlos Lopez-Baez, Daniel J. Simpson, Laura Lleras Forero, Zhiqiang Zeng, Hannah Brunsdon, Angela Salzano, Alessandro Brombin, Cameron Wyatt, Witold M. Rybski, Leonie F. A. Huitema, Rodney M. Dale, Koichi Kawakami, Christoph Englert, Tamir Chandra, Stefan Schulte‐Merker, Nicholas D. Hastie, E. Elizabeth Patton
Software Mentions: 4
Published: almost 7 years ago
10.1038/s42003-020-0813-8
Gene expression variation in the brains of harvester ant foragers is associated with collective behavior
Cited by: 16
Author(s): Daniel Friedman, Ryan A. York, Austin T. Hilliard, Deborah M. Gordon
Software Mentions: 4
Published: over 4 years ago
10.7554/eLife.53237
Rapid sex-specific adaptation to high temperature in Drosophila
Cited by: 20
Author(s): Sheng‐Kai Hsu, Ana Marija Jakšić, Viola Nolte, Manolis Lirakis, Robert Kofler, Neda Barghi, Elisabetta Versace, Christian Schlötterer
Software Mentions: 4
Published: over 4 years ago
10.1016/j.devcel.2020.09.002
Combinatorial Action of Temporally Segregated Transcription Factors
Cited by: 38
Author(s): Julien Charest, Thomas Daniele, Jingkui Wang, Aleksandr Bykov, Ariane Mandlbauer, Mila Asparuhova, Josef Röhsner, Paula Gutiérrez-Pérez, Luisa Cochella
Software Mentions: 4
Published: about 4 years ago
10.1016/j.ajhg.2015.11.018
Autosomal-Dominant Corneal Endothelial Dystrophies CHED1 and PPCD1 Are Allelic Disorders Caused by Non-coding Mutations in the Promoter of OVOL2
Cited by: 65
Author(s): Alice E. Davidson, Petra Lišková, Cerys J. Evans, Ľubica Ďuďáková, Lenka Nosková, Nikolas Pontikos, Hana Hartmannová, Kateřina Hodaňová, Viktor Stránecký, Zbyněk Kozmík, Hannah J. Levis, Nwamaka Juliana Idigo, Noriaki Sasai, Geoffrey J. Maher, James Bellingham, Neyme Veli, Neil D. Ebenezer, Michael E. Cheetham, Julie T. Daniels, Caroline Thaung, Kateřina Jirsová, Vincent Plagnol, Martin Filipec, Stanislav Kmoch, Stephen Tuft, Alison J. Hardcastle
Software Mentions: 4
Published: almost 9 years ago
10.1080/07853890.2020.1858234
Increased expression of hypoxia-induced factor 1α mRNA and its related genes in myeloid blood cells from critically ill COVID-19 patients
Cited by: 40
Author(s): Keiko Taniguchi‐Ponciano, Eduardo Vadillo, Héctor Mayani, César González-Bonilla, Javier Torres, Abraham Majluf, Guillermo Flores‐Padilla, Niels H. Wacher, Juan Carlos Galán, Eduardo Ferat‐Osorio, Francisco Blanco-Favéla, Constantino López-Macı́as, Aldo Ferreira‐Hermosillo, Claudia Ramírez‐Rentería, Eduardo Peña-Martínez, Gloria Silva-Román, Sandra Vela-Patiño, Carlos Mata-Lozano, Roberto Carvente-Garcia, Lourdes Basurto-Acevedo, Renata Saucedo, Patricia Piña‐Sánchez, Antonieta Chávez‐González, Daniel Marrero‐Rodríguez, Moisés Mercado
Software Mentions: 4
Published: almost 4 years ago
10.1016/j.isci.2021.102751
The effects of aging on molecular modulators of human embryo implantation
Cited by: 6
Author(s): Panagiotis Ntostis, Grace Swanson, Georgia Kokkali, David Iles, John Huntriss, Agni Pantou, Maria Tzetis, Konstantinos Pantos, Helen M. Picton, Stephen A. Krawetz, D. H. Miller
Software Mentions: 4
Published: over 3 years ago
10.1186/s12915-019-0646-4
Enabling cell-type-specific behavioral epigenetics in Drosophila: a modified high-yield INTACT method reveals the impact of social environment on the epigenetic landscape in dopaminergic neurons
Cited by: 15
Author(s): Pavan Agrawal, Phuong Chung, Ulrike Heberlein, Clement F. Kent
Software Mentions: 4
Published: over 5 years ago
10.1093/hmg/ddab140
Human photoreceptor cells from different macular subregions have distinct transcriptional profiles
Cited by: 15
Author(s): Andrew P. Voigt, Nathaniel K. Mullin, S. Scott Whitmore, Adam P. DeLuca, Erin R Burnight, Xiuying Liu, Budd A. Tucker, Todd E. Scheetz, Edwin M Stone, Robert F. Mullins
Software Mentions: 4
Published: over 3 years ago
10.1128/mSphere.00231-18
Kinome Expansion in the Fusarium oxysporum Species Complex Driven by Accessory Chromosomes
Cited by: 28
Author(s): Gregory A. DeIulio, Li Guo, Yong Zhang, Jonathan M. Goldberg, H. Corby Kistler, Lijun Ma
Software Mentions: 4
Published: over 6 years ago
10.3390/ijms22042006
Transcriptome Analysis Reveals HgCl2 Induces Apoptotic Cell Death in Human Lung Carcinoma H1299 Cells through Caspase-3-Independent Pathway
Cited by: 2
Author(s): Mi Jin Kim, Jin‐Hong Park, Jin-Ho Kim, Jiyoung Kim, Mi-Jin An, Geun-Seup Shin, Hyun-Min Lee, Chulhong Kim, Jung-Woong Kim
Software Mentions: 4
Published: almost 4 years ago
10.3390/ijms22020574
The Resistance of Narrow-Leafed Lupin to Diaporthe toxica Is Based on the Rapid Activation of Defense Response Genes
Cited by: 7
Author(s): Michał Książkiewicz, Sandra Rychel-Bielska, Piotr Plewiński, Maria Nuc, Witold Irzykowski, M. Jędryczka, Paweł Krajewski
Software Mentions: 4
Published: almost 4 years ago
10.3389/fcimb.2016.00193
Genome-Wide Transcriptional and Post-transcriptional Regulation of Innate Immune and Defense Responses of Bovine Mammary Gland to Staphylococcus aureus
Cited by: 41
Author(s): Lingzhao Fang, Yali Hou, Jinpeng An, Bingjie Li, Mengyuan Song, Xiao Wang, Peter Sørensen, Yichun Dong, Chao Liu, Yachun Wang, Huabin Zhu, Shengli Zhang, Ying Yu
Software Mentions: 4
Published: almost 8 years ago
10.3389/fgene.2020.00658
Integrating GWAS and Transcriptomics to Identify the Molecular Underpinnings of Thermal Stress Responses in Drosophila melanogaster
Cited by: 18
Author(s): Melise Cristine Lecheta, David N. Awde, Thomas S. O’Leary, Laura N. Unfried, Nicky Jacobs, Miles H. Whitlock, Eleanor A. McCabe, Beck Powers, Katie Bora, James S. Waters, Heather J. Axen, Seth Frietze, Brent L. Lockwood, Nicholas M. Teets, Sara Helms Cahan
Software Mentions: 4
Published: over 4 years ago
10.1186/s13058-020-01318-2
MDM2 inhibition in combination with endocrine therapy and CDK4/6 inhibition for the treatment of ER-positive breast cancer
Cited by: 35
Author(s): Neil Portman, Heloisa Helena Milioli, Sarah Alexandrou, Rhiannon Coulson, Aliza Yong, Kristine J. Fernandez, Karin K.M. Chia, Ensar Halilovic, Davendra Segara, Andrew Parker, Sue Haupt, Ygal Haupt, Wayne D. Tilley, Alexander Swarbrick, C. Elizabeth Caldon, Elgene Lim
Software Mentions: 4
Published: over 4 years ago
10.3389/fimmu.2021.664249
Over-Generalizing About GC (Hypoxia): Pitfalls of Limiting Breadth of Experimental Systems and Analyses in Framing Informatics Conclusions
Cited by: 7
Author(s): Mark Boothby, Ariel Raybuck, Sung Hoon Cho, Kristy R. Stengel, Volker H. Haase, Scott W. Hiebert, Jingxin Li
Software Mentions: 4
Published: over 3 years ago
10.1128/mBio.02500-18
Determination of the Global Pattern of Gene Expression in Yeast Cells by Intracellular Levels of Guanine Nucleotides
Cited by: 8
Author(s): Andrew Hesketh, Marta Vergnano, Stephen G. Oliver
Software Mentions: 4
Published: over 5 years ago
10.1186/s13395-021-00269-2
Single cell RNA-seq analysis of the flexor digitorum brevis mouse myofibers
Cited by: 5
Author(s): Rohan Verma, Suraj Kannan, Brian L. Lin, Katherine M. Fomchenko, Tim O. Nieuwenhuis, Arun H. Patil, Clarisse Lukban, Xiao‐Ping Yang, Karen Fox-Talbot, Matthew N. McCall, Chulan Kwon, David A. Kass, Avi Rosenberg, Marc K. Halushka
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-021-96149-2
Long noncoding RNA landscapes specific to benign and malignant thyroid neoplasms of distinct histological subtypes
Cited by: 2
Author(s): V. D. Yakushina, В. В. Стрельников, А. С. Танас, А. В. Лавров
Software Mentions: 4
Published: over 3 years ago
10.3389/fnmol.2020.00057
Sequences of Reverse Transcribed Brain DNA Are Modified by Learning
Cited by: 2
Author(s): Antonio Giuditta, Joyce Casalino
Software Mentions: 4
Published: over 4 years ago
10.1038/s41598-021-83514-4
Insights into long non-coding RNA regulation of anthocyanin carrot root pigmentation
Cited by: 7
Author(s): Constanza Chialva, Thomas Blein, Martín Crespi, Diego Lijavetzky
Software Mentions: 4
Published: almost 4 years ago
10.1186/s13287-021-02247-3
Analyses of the pericyte transcriptome in ischemic skeletal muscles
Cited by: 9
Author(s): Yuan-chi Teng, Alfredo L. Porfírio‐Sousa, Giulia M. Ribeiro, Marcela Corso Arend, Lindolfo da Silva Meirelles, Elizabeth Chen, Daniela Santoro Rosa, Sang Won Han
Software Mentions: 3
Published: over 3 years ago
10.1002/cam4.3846
MX2 mediates establishment of interferon response profile, regulates XAF1, and can sensitize melanoma cells to targeted therapy
Cited by: 5
Author(s): Marina Juraleviciute, Jérémie Nsengimana, Julia Newton‐Bishop, Gert J. Hendriks, Ana Slipicevic
Software Mentions: 3
Published: over 3 years ago
10.26508/lsa.201900635
Essential role of the<i>Crk</i>family-dosage in DiGeorge-like anomaly and metabolic homeostasis
Cited by: 7
Author(s): Akira Imamoto, Sewon Ki, Leiming Li, Kenji Iwamoto, Venkat Maruthamuthu, John Devany, Ocean Lu, Takayuki Kanazawa, Suxiang Zhang, Takuji Yamada, Akiyoshi Hirayama, Shinji Fukuda, Yutaka Suzuki, Mariko Okada
Software Mentions: 3
Published: almost 5 years ago
10.1186/s12864-021-07577-3
Zea mays RNA-seq estimated transcript abundances are strongly affected by read mapping bias
Cited by: 2
Author(s): Shuhua Zhan, Cortland K. Griswold, Lewis Lukens
Software Mentions: 3
Published: over 3 years ago
10.18632/oncotarget.25672
The calcium channel proteins ORAI3 and STIM1 mediate TGF-β induced<i>Snai1</i>expression
Cited by: 21
Author(s): Atrayee Bhattacharya, Janani Kumar, Kole Hermanson, Yuyang Sun, Humaira Qureshi, Danielle Perley, Adam Scheidegger, Brij B. Singh, Archana Dhasarathy
Software Mentions: 3
Published: over 6 years ago
10.1186/s13041-020-0561-1
Unveiling synapse pathology in spinal bulbar muscular atrophy by genome-wide transcriptome analysis of purified motor neurons derived from disease specific iPSCs
Cited by: 17
Author(s): Kazunari Onodera, Daisuke Shimojo, Yoshio Ishihara, Masato Yano, Fuyuki Miya, Haruhiko Banno, Naoko Kuzumaki, Takuji Ito, Ryosuke Okada, Bruno Herculano, Manabu Ohyama, Mari Yoshida, Tatsuhiko Tsunoda, Masahisa Katsuno, Manabu Doyu, Gen Sobue, Hideyuki Okano, Yohei Okada
Software Mentions: 3
Published: almost 5 years ago
10.1074/mcp.TIR119.001431
Sensitive Quantitative Proteomics of Human Hematopoietic Stem and Progenitor Cells by Data-independent Acquisition Mass Spectrometry
Cited by: 41
Author(s): Sabine Amon, Fabienne Meier-Abt, Ludovic Gillet, Slavica Dimitrieva, Alexandre Theocharides, Markus G. Manz, Ruedi Aebersold
Software Mentions: 3
Published: over 5 years ago
10.7717/peerj.3389
Modeling thecis-regulatory modules of genes expressed in developmental stages ofDrosophila melanogaster
Cited by: 2
Author(s): Yosvany López, Alexis Vandenbon, Akinao Nose, Kenta Nakai
Software Mentions: 3
Published: over 7 years ago
10.1371/journal.pbio.2000731
Lung Basal Stem Cells Rapidly Repair DNA Damage Using the Error-Prone Nonhomologous End-Joining Pathway
Cited by: 35
Author(s): Clare E. Weeden, Yunshun Chen, Bettzy Stephen, Yifang Hu, Georg Ramm, Kate D. Sutherland, Gordon K. Smyth, Marie Liesse Asselin-Labat
Software Mentions: 3
Published: almost 8 years ago
10.1371/journal.pbio.3001062
Borrelia burgdorferi infection induces long-term memory-like responses in macrophages with tissue-wide consequences in the heart
Cited by: 3
Author(s): Diego Barriales, Itziar Martín-Ruiz, Ana Carreras-González, Marta Montesinos-Robledo, Mikel Azkargorta, Ibón Iloro, Iraide Escobés, Teresa Martín-Mateos, Estíbaliz Atondo, Ainhoa Palacios, Monika Gonzalez-Lopez, Laura Bárcena, Ana R. Cortázar, Diana Cabrera, Ainize Peña‐Cearra, Sebastiaan van Liempd, Juan M Falcón-Pérez, Miguel Ángel Pascual-Itoiz, Juana M. Flores, Leticia Abecia, Aize Pellón, Maria Luz Martínez‐Chantar, Ana M. Aransay, Alberto Pascual, Félix Elortza, Edurne Berra, José L. Lavín, Héctor Rodríguez, Juan Anguíta
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pgen.1008637
Transcriptional regulation of genes bearing intronic heterochromatin in the rice genome
Cited by: 23
Author(s): Nino A. Espinas, Le Ngoc Tu, Leonardo Furci, Yasuka Shimajiri, Yoshiko Harukawa, Saori Miura, Shohei Takuno, Hidetoshi Saze
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pgen.1008229
Analysis of genetically driven alternative splicing identifies FBXO38 as a novel COPD susceptibility gene
Cited by: 16
Author(s): Aabida Saferali, Jeong H. Yun, Margaret M. Parker, Phuwanat Sakornsakolpat, Robert Chase, Andrew Lamb, Brian D. Hobbs, Marike Boezen, Xiangpeng Dai, Kim de Jong, Terri H. Beaty, Wenyi Wei, Xiaobo Zhou, Edwin K. Silverman, Michael H. Cho, Peter J. Castaldi, Craig P. Hersh
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pgen.1009461
The long noncoding RNA FRILAIR regulates strawberry fruit ripening by functioning as a noncanonical target mimic
Cited by: 28
Author(s): Yajun Tang, Zhibo Qu, Jiajun Li, Reqing He, David L. Adelson, Youlin Zhu, Zhenbiao Yang, Dong Wang
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0206715
Heat shock in C. elegans induces downstream of gene transcription and accumulation of double-stranded RNA
Cited by: 13
Author(s): Marko Melnick, Patrick Gonzales, Joseph M Cabral, Mary A. Allen, Robin D. Dowell, Christopher D. Link
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pone.0237055
Genome-wide binding analysis of 195 DNA binding proteins reveals “reservoir” promoters and human specific SVA-repeat family regulation
Cited by: 1
Author(s): Michael J. Smallegan, Soraya I. Shehata, Savannah Spradlin, Alison R. Swearingen, Graycen E. Wheeler, Arpan Das, Giulia A Corbet, Benjamin Nebenfuehr, Daniel Ahrens, Devin Tauber, Shelby R. Lennon, Kevin Choi, Thao Ngoc Huynh, Tom Wieser, Kristen Schneider, Michael S. Bradshaw, Joel Basken, Maria Eliana Lai, Timothy D. Read, Matt Hynes-Grace, Dan Timmons, Jon Demasi, John L. Rinn
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0196913
Optimizing exosomal RNA isolation for RNA-Seq analyses of archival sera specimens
Cited by: 36
Author(s): Emily Prendergast, Marcos Abraão de Souza Fonseca, Felipe Segato Dezem, Jenny Lester, Beth Y. Karlan, Houtan Noushmehr, Xianzhi Lin, Kate Lawrenson
Software Mentions: 3
Published: over 6 years ago
10.1186/s12864-019-5829-4
Genome-wide RNA pol II initiation and pausing in neural progenitors of the rat
Cited by: 6
Author(s): Adam Scheidegger, Carissa J. Dunn, Ann Samarakkody, Nii Koney-Kwaku Koney, Danielle Perley, Ramendra N. Saha, Sergei Nechaev
Software Mentions: 3
Published: over 5 years ago
10.3390/cancers13010049
Gene Expression Signatures of a Preclinical Mouse Model during Colorectal Cancer Progression under Low-Dose Metronomic Chemotherapy
Cited by: 6
Author(s): Hung Ho-Xuan, Gerhard Lehmann, Petar Glažar, Foivos Gypas, Norbert Eichner, Kevin Heizler, Hans J. Schlitt, Mihaela Zavolan, Nikolaus Rajewsky, Gunter Meister, Christina Hackl
Software Mentions: 3
Published: almost 4 years ago
10.1186/s12864-018-4627-8
Transcriptome and secretome analysis of Aspergillus fumigatus in the presence of sugarcane bagasse
Cited by: 44
Author(s): Paula Fagundes de Gouvêa, Aline Vianna Bernardi, Luís Eduardo Gerolamo, Emerson de Souza Santos, Diego Mauricio Riaño‐Pachón, Sérgio Akira Uyemura, Taísa Magnani Dinamarco
Software Mentions: 3
Published: over 6 years ago
10.1038/s41419-019-1792-x
The Cornelia de Lange Syndrome-associated factor NIPBL interacts with BRD4 ET domain for transcription control of a common set of genes
Cited by: 32
Author(s): Noelia Luna-Peláez, Rosana March-Díaz, María Ceballos-Chávez, José A. Guerrero-Martínez, Paolo Grazioli, Pablo García-Gutiérrez, Thomas Vaccari, Valentina Massa, José Carlos Castañeda Reyes, Mario García-Domínguez
Software Mentions: 3
Published: over 5 years ago
10.1186/s13148-020-00916-3
The fusiform gyrus exhibits an epigenetic signature for Alzheimer’s disease
Cited by: 11
Author(s): Dingailu Ma, Irfete S. Fetahu, Mei Wang, Rui Fang, Jia-hui Li, Huan Liu, Tobin Gramyk, Isabella Iwanicki, Sophie Zhaotao Gu, Winnie Xu, Li Tan, Feizhen Wu, Yujiang Geno Shi
Software Mentions: 3
Published: about 4 years ago
10.1002/evl3.41
Parallel evolution of gene expression between trophic specialists despite divergent genotypes and morphologies
Cited by: 31
Author(s): Joseph A. McGirr, Christopher H. Martin
Software Mentions: 3
Published: over 6 years ago
10.1186/s40164-020-00164-4
Frequent upregulation of G9a promotes RelB-dependent proliferation and survival in multiple myeloma
Cited by: 8
Author(s): Xi Yun Zhang, Deepa Rajagopalan, Tae-Hoon Chung, Lissa Hooi, Tan Boon Toh, Johann Shane Tian, Masturah Bte Mohd Abdul Rashid, Noor Rashidha Bte Meera Sahib, Meijia Gu, Jackwee Lim, Wilson Wang, Wee Joo Chng, Sudhakar Jha, Edward Kai‐Hua Chow
Software Mentions: 3
Published: over 4 years ago
10.3389/fbioe.2020.611701
Efficient Production of Pyruvate Using Metabolically Engineered Lactococcus lactis
Cited by: 5
Author(s): Fan Suo, Jianming Liu, Jun Chen, Xuanji Li, Peter Ruhdal Jensen
Software Mentions: 3
Published: almost 4 years ago
10.3389/fcell.2021.697947
Coordinated Expressional Landscape of the Human Placental miRNome and Transcriptome
Cited by: 14
Author(s): Rain Inno, Triin Kikas, Kristiina Lillepea, Maris Laan
Software Mentions: 3
Published: over 3 years ago