bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2014.00786

Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea
Cited by: 33
Author(s): Carlo Berg, Luisa Listmann, Verona Vandieken, Angela Vogts, Klaus Jürgens
Software Mentions: 2
Published: over 11 years ago

10.3389/fmicb.2019.01209

Effect of Re-acidification on Buffalo Grass Rhizosphere and Bulk Microbial Communities During Phytostabilization of Metalliferous Mine Tailings
Cited by: 23
Author(s): Linnea K. Honeker, Catherine F. Gullo, Julia W. Neilson, Jon Chorover, Raina M. Maier
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2018.00214

Characterization of Asymptomatic Bacteriuria Escherichia coli Isolates in Search of Alternative Strains for Efficient Bacterial Interference against Uropathogens
Cited by: 21
Author(s): Christoph Stork, Beáta Kovács, Barnabás Rózsai, Johannes Putze, Matthias Kiel, Ágnes Dorn, Judit Kovács, Szilvia Melegh, Andreas Leimbach, Tamás Kovács, G. Schneider, Mónika Kerényi, Levente Emődy, Ulrich Dobrindt
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2016.00536

Investigation of the Activity of the Microorganisms in a Reblochon-Style Cheese by Metatranscriptomic Analysis
Cited by: 46
Author(s): Christophe Monnet, Éric Dugat-Bony, Dominique Swennen, Jean-Marie Beckerich, Françoise Irlinger, Sébastien Fraud, Pascal Bonnarme
Software Mentions: 2
Published: over 10 years ago

10.3389/fmicb.2021.642125

Comparative Genomics of Emerging Lineages and Mobile Resistomes of Contemporary Broiler Strains of Salmonella Infantis and E. coli
Cited by: 6
Author(s): Ama Szmolka, Haleluya Wami, Ulrich Dobrindt
Software Mentions: 2
Published: over 5 years ago

10.1186/s12915-015-0192-7

Sympatric ecological divergence associated with a color polymorphism
Cited by: 27
Author(s): Henrik Kusche, Kathryn R. Elmer, Axel Meyer
Software Mentions: 2
Published: almost 11 years ago

10.3389/fmicb.2014.00105

Stormwater runoff drives viral community composition changes in inland freshwaters
Cited by: 25
Author(s): Kurt E. Williamson, Jamie V. Harris, Jasmin C. Green, Faraz Rahman, Randolph M. Chambers
Software Mentions: 2
Published: over 12 years ago

10.3389/fmicb.2015.01166

Taxonomic and functional characteristics of microbial communities and their correlation with physicochemical properties of four geothermal springs in Odisha, India
Cited by: 57
Author(s): Jhasketan Badhai, Tarini Shankar Ghosh, Subrata K. Das
Software Mentions: 2
Published: almost 11 years ago

10.1186/s40168-020-00826-9

Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics
Cited by: 54
Author(s): Sanjie Cao, Weipeng Zhang, Wei Ding, Meng Wang, Shen Fan, Bo Yang, Andrew McMinn, Min Wang, Bin-Bin Xie, Qi‐Long Qin, Xiu-Lan Chen, Jianfeng He, Yuzhong Zhang
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2017.00574

Characterization of Unexplored Deadwood Mycobiome in Highly Diverse Subtropical Forests Using Culture-independent Molecular Technique
Cited by: 30
Author(s): Witoon Purahong, Katherina A. Pietsch, Guillaume Lentendu, Ricardo Schöps, Helge Bruelheide, Christian Wirth, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0242082

Taphonomic information from the modern vertebrate death assemblage of Doñana National Park, Spain
Cited by: 4
Author(s): M. Soledad Domingo, David Manuel Martín-Perea, Catherine Badgley, Enrique Cantero, Paloma López-Guerrero, Adriana Oliver, Juan J. Negro
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0196431

Long-term changes in the planktonic cnidarian community in a mesoscale area of the NW Mediterranean
Cited by: 9
Author(s): Elena Guerrero, Josep María Gili, Jordi Grinyó, Vanesa Raya, Ana Sabatés
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2017.00608

Inbred Mouse Populations Exhibit Intergenerational Changes in Intestinal Microbiota Composition and Function Following Introduction to a Facility
Cited by: 16
Author(s): Jocelyn M. Choo, Paul J. Trim, Lex E. X. Leong, Guy C. J. Abell, Carly Brune, Nicole Jeffries, Steven Wesselingh, T. Neil Dear, Marten F. Snel, Geraint B. Rogers
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2016.01046

Populations of Stored Product Mite Tyrophagus putrescentiae Differ in Their Bacterial Communities
Cited by: 35
Author(s): Tomáš Erban, Pavel B. Klimov, Jaroslav Smrž, Thomas W. Phillips, Marta Nešvorná, Jan Kopecký, Jan Hubert
Software Mentions: 2
Published: about 10 years ago

10.3389/fmicb.2018.00423

Halotolerant Exiguobacterium profundum PHM11 Tolerate Salinity by Accumulating L-Proline and Fine-Tuning Gene Expression Profiles of Related Metabolic Pathways
Cited by: 21
Author(s): Vikas Patel, R. P. Srivastava, Anjney Sharma, Anchal Srivastava, Surinder Singh, Alok Kumar Srivastava, Prem Lal Kashyap, Hillol Chakdar, Kurinji Pandiyan, Alok Kalra, Anil Kumar Saxena
Software Mentions: 2
Published: over 8 years ago

10.3897/zookeys.801.22829

The role of urban forest patches in maintaining isopod diversity (Oniscidea)
Cited by: 4
Author(s): Elisabeth Hornung, Andrea Kásler, Zsolt Tóth
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0146566

Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest
Cited by: 17
Author(s): Julia Elidia Lima-Perim, Emiliana Manesco Romagnoli, Francisco Dini‐Andreote, Ademir Durrer, Armando Cavalcante Franco Dias, Fernando Dini Andreote
Software Mentions: 2
Published: over 10 years ago

10.3897/zookeys.820.29632

The identity of the Sri Lankan Amblypharyngodon (Teleostei, Cyprinidae)
Cited by: 7
Author(s): Hiranya Sudasinghe, Rohan Pethiyagoda, Kalana Maduwage, Madhava Meegaskumbura
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0195345

Fungal community profiles in agricultural soils of a long-term field trial under different tillage, fertilization and crop rotation conditions analyzed by high-throughput ITS-amplicon sequencing
Cited by: 65
Author(s): Loreen Sommermann, Joerg Geistlinger, Daniel Wibberg, Annette Deubel, Jessica Zwanzig, Doreen Babin, Andreas Schlüter, Ingo Schellenberg
Software Mentions: 2
Published: over 8 years ago

10.1186/s40168-018-0501-9

Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing
Cited by: 119
Author(s): Ramesh Pandit, Ankit T. Hinsu, Namrata Patel, Prakash G. Koringa, Subhash J. Jakhesara, Jalpa Thakkar, Tejas Shah, Georgina Limon, Androniki Psifidi, Javier Guitian, David Hume, Fiona M. Tomley, D. N. Rank, Muthusamy Raman, K.G. Tirumurugaan, Damer P. Blake, Chaitanya G. Joshi
Software Mentions: 2
Published: about 8 years ago

10.3389/fnut.2021.590978

Mainstreaming Local Food Species for Nutritional and Livelihood Security: Insights From Traditional Food Systems of Adi Community of Arunachal Pradesh, India
Cited by: 3
Author(s): Ranjay K. Singh, Rakesh Bhardwaj, Anamika Singh, Temin Payum, Kumar Arvind, Anshuman Singh, L. Wangchu, Sanjay Kumar Upadhyay
Software Mentions: 2
Published: almost 5 years ago

10.1186/s40168-020-00862-5

Syntrophic acetate oxidation replaces acetoclastic methanogenesis during thermophilic digestion of biowaste
Cited by: 97
Author(s): Stefan Dyksma, Lukas Jansen, Claudia Gallert
Software Mentions: 2
Published: about 6 years ago

10.1186/s40168-017-0391-2

Grapevine rootstocks shape underground bacterial microbiome and networking but not potential functionality
Cited by: 164
Author(s): Ramona Marasco, Eleonora Rolli, Marco Fusi, Grégoire Michoud, Daniele Daffonchio
Software Mentions: 2
Published: over 8 years ago

10.1186/s40168-021-01022-z

Opportunistic bacteria with reduced genomes are effective competitors for organic nitrogen compounds in coastal dinoflagellate blooms
Cited by: 21
Author(s): Han Yu, Nianzhi Jiao, Yao Zhang, Fan Zhang, Chen He, Xuejiao Liang, Ruanhong Cai, Quan Shi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0230952

Using Maize δ15N values to assess soil fertility in fifteenth- and sixteenth-century ad Iroquoian agricultural fields
Cited by: 10
Author(s): John P. Hart, Robert S. Feranec
Software Mentions: 2
Published: over 6 years ago

10.1186/s40168-018-0587-0

Estrogen-mediated gut microbiome alterations influence sexual dimorphism in metabolic syndrome in mice
Cited by: 128
Author(s): Kanakaraju Kaliannan, Ruairi C. Robertson, Kiera Murphy, Catherine Stanton, Chao Kang, Bin Wang, Lei Hao, Atul K. Bhan, Jing Kang
Software Mentions: 2
Published: almost 8 years ago

10.3897/zookeys.932.50602

Integrative taxonomy of the rock-dwelling gecko Cnemaspis siamensis complex (Squamata, Gekkonidae) reveals a new species from Nakhon Si Thammarat Province, southern Thailand
Cited by: 3
Author(s): Natee Ampai, Perry L. Wood, Bryan L. Stuart, Anchalee Aowphol
Software Mentions: 2
Published: over 6 years ago

10.1186/s40168-020-00810-3

Lung function and microbiota diversity in cystic fibrosis
Cited by: 115
Author(s): Leah Cuthbertson, Alan W. Walker, Anna Oliver, Geraint B. Rogers, Damian W. Rivett, Thomas H. Hampton, Alix Ashare, J. Stuart Elborn, Anthony De Soyza, Mary Carroll, Lucas R. Hoffman, Clare Lanyon, Samuel M. Moskowitz, George A. O’Toole, Julian Parkhill, Paul J. Planet, Charlotte C. Tenebäck, Michael Tunney, Jonathan B. Zuckerman, Kenneth D. Bruce, Christopher J. van der Gast
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0177458

Ancient mtDNA diversity reveals specific population development of wild horses in Switzerland after the Last Glacial Maximum
Cited by: 5
Author(s): Julia Elsner, Michael Hofreiter, Jörg Schibler, Angela Schlumbaum
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0186939

Rhizospheric microbial communities associated with wild and cultivated frankincense producing Boswellia sacra tree
Cited by: 14
Author(s): Abdul Latif Khan, Sajjad Asaf, Ahmed Al‐Rawahi, In‐Jung Lee, Ahmed Al‐Harrasi
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12915-019-0702-0

Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
Cited by: 18
Author(s): Isidro Álvarez‐Escribano, Christoph Sasse, Jin Woo Bok, Hyunsoo Na, Mojgan Amirebrahimi, Anna Lipzen, Wendy Schackwitz, Joel Martin, Kerrie Barry, Gabriel Gutiérrez, Sara Cea-Sánchez, Ana T. Marcos, Igor V. Grigoriev, Nancy P. Keller, Gerhard H. Braus, David Cánovas
Software Mentions: 2
Published: almost 7 years ago

10.1111/zsc.12110

Form, function and phylogeny: comparative morphometrics of Lake Tanganyika's cichlid tribe Tropheini
Cited by: 23
Author(s): Katrin A. Wanek, Christian Sturmbauer
Software Mentions: 2
Published: over 11 years ago

10.1186/s40851-018-0119-6

Testing the adaptive value of gastropod shell morphology to flow: a multidisciplinary approach based on morphometrics, computational fluid dynamics and a flow tank experiment
Cited by: 16
Author(s): Gerlien Verhaegen, Hendrik Herzog, Katrin Korsch, Gerald Kerth, M. Brede, Martín Haase
Software Mentions: 2
Published: over 7 years ago

10.3389/fpls.2018.00463

Forest Soil Phosphorus Resources and Fertilization Affect Ectomycorrhizal Community Composition, Beech P Uptake Efficiency, and Photosynthesis
Cited by: 43
Author(s): Aljoša Zavišić, Nan Yang, Sven Marhan, Ellen Kandeler, Andrea Polle
Software Mentions: 2
Published: over 8 years ago

10.1093/aobpla/plaa004

Functional composition and diversity of leaf traits in subalpine versus alpine vegetation in the Apennines
Cited by: 18
Author(s): Angela Stanisci, Alessandro Bricca, Valentina Calabrese, Maurizio Cutini, Harald Pauli, Klaus Steinbauer, María Laura Carranza
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2014.00806

Genetic diversity in aspen and its relation to arthropod abundance
Cited by: 6
Author(s): Chunxia Zhang, Barbara Vornam, Katharina Volmer, Kathleen Prinz, Frauke Kleemann, Lars Köhler, Andrea Polle, Reiner Finkeldey
Software Mentions: 2
Published: over 11 years ago

10.3390/microorganisms8010058

A Deeper Look into the Biodiversity of the Extremely Acidic Copahue volcano-Río Agrio System in Neuquén, Argentina
Cited by: 9
Author(s): Germán López Bedogni, Francisco Luis Massello, Alejandra Giaveno, Edgardo R. Donati, María Sofía Urbieta
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2015.00636

Host and non-host roots in rice: cellular and molecular approaches reveal differential responses to arbuscular mycorrhizal fungi
Cited by: 67
Author(s): Valentina Fiorilli, Marta Vallino, Chiara Biselli, Antonella Faccio, Paolo Bagnaresi, Paola Bonfante
Software Mentions: 2
Published: about 11 years ago

10.3390/microorganisms8091387

Both Soil Bacteria and Soil Chemical Property Affected the Micropredator Myxobacterial Community: Evidence from Natural Forest Soil and Greenhouse Rhizosphere Soil
Cited by: 6
Author(s): Zhihui Yang, Xianjiao Zhang, Qing Yao, Honghui Zhu
Software Mentions: 2
Published: almost 6 years ago

10.3389/fpls.2015.00490

Characterization of culturable bacterial endophytes and their capacity to promote plant growth from plants grown using organic or conventional practices
Cited by: 101
Author(s): Ye Xia, Seth DeBolt, Jean-Luc Dreyer, Delia Scott, Mark A. Williams
Software Mentions: 2
Published: about 11 years ago

10.3390/microorganisms8081245

Ibuprofen Degradation and Associated Bacterial Communities in Hyporheic Zone Sediments
Cited by: 22
Author(s): Cyrus Rutere, Kirsten Knoop, Malte Posselt, Adrian Ho, Marcus A. Horn
Software Mentions: 2
Published: almost 6 years ago

10.3389/fpls.2016.01619

Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production
Cited by: 34
Author(s): José L. Rambla, Almudena Trapero-Mozos, Gianfranco Diretto, Ángela Rubio-Moraga, Antonio Granell, Lourdes Gómez-Gómez, Oussama Ahrazem
Software Mentions: 2
Published: almost 10 years ago

10.3390/microorganisms8060942

Uncovered Microbial Diversity in Antarctic Cryptoendolithic Communities Sampling Three Representative Locations of the Victoria Land
Cited by: 10
Author(s): Claudia Coleine, Nuttapon Pombubpa, Laura Zucconi, Silvano Onofri, Benedetta Turchetti, Pietro Buzzini, Jason E. Stajich, Laura Selbmann
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0168860

Effects of Propidium Monoazide (PMA) Treatment on Mycobiome and Bacteriome Analysis of Cystic Fibrosis Airways during Exacerbation
Cited by: 21
Author(s): Linh D. N. Nguyen, Pieter Deschaght, Sophie Merlin, Alexandre Loywick, Christophe Audebert, S. Van Daele, Éric Viscogliosi, Mario Vaneechoutte, Laurence Delhaès
Software Mentions: 2
Published: over 9 years ago

10.3389/fpls.2018.01566

Mechanical Effects of Cellulose, Xyloglucan, and Pectins on Stomatal Guard Cells of Arabidopsis thaliana
Cited by: 20
Author(s): Hojae Yi, Yue Rui, Baris Kandemir, James Wang, Charles T. Anderson, Virendra M. Puri
Software Mentions: 2
Published: almost 8 years ago

10.3390/ph14030212

D-α-Tocopherol-Based Micelles for Successful Encapsulation of Retinoic Acid
Cited by: 24
Author(s): Guendalina Zuccari, Sara Baldassari, Silvana Alfei, Barbara Marengo, Giulia Elda Valenti, Cinzia Domenicotti, Giorgia Ailuno, Carla Villa, Leonardo Marchitto, Gabriele Caviglioli
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-13-67

Aluminum tolerance association mapping in triticale
Cited by: 35
Author(s): Agnieszka Niedziela, Piotr Tomasz Bednarek, H. Cichy, Grzegorz Budzianowski, Andrzej Kilian, A. Anioł
Software Mentions: 2
Published: over 14 years ago

10.3390/microorganisms9061214

Gut Microbiota Dynamics in Natural Populations of Pintomyia evansi under Experimental Infection with Leishmania infantum
Cited by: 4
Author(s): Rafael José Vivero, Víctor Alfonso Castañeda-Monsalve, Lupe Romero, Gregory D. D. Hurst, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera
Software Mentions: 2
Published: about 5 years ago

10.1186/s12885-020-07007-9

Integration of genomics, metagenomics, and metabolomics to identify interplay between susceptibility alleles and microbiota in adenoma initiation
Cited by: 9
Author(s): Jacob E. Moskowitz, Anthony Doran, Zhentian Lei, Susheel Bhanu Busi, Marcia L. Hart, Craig L. Franklin, Lloyd W. Sumner, Thomas M. Keane
Software Mentions: 2
Published: about 6 years ago

10.1093/aobpla/plab035

Functional traits predict resident plant response to <i>Reynoutria japonica</i> invasion in riparian and fallow communities in southern Poland
Cited by: 3
Author(s): Marcin W. Woch, Paweł Kapusta, Małgorzata Stanek, Szymon Zubek, Anna M. Stefanowicz
Software Mentions: 2
Published: about 5 years ago

10.3390/microorganisms7110518

Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem
Cited by: 11
Author(s): Despoina Vokou, Savvas Genitsaris, Katerina Karamanoli, Katerina Vareli, Marina Zachari, Despoina Voggoli, Nikolaos Monokrousos, John M. Halley, Ioannis Sainis
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12864-020-07333-z

Nutrient-imbalanced conditions shift the interplay between zooplankton and gut microbiota
Cited by: 4
Author(s): Yingdong Li, Zhimeng Xu, Hongbin Liu
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms8040581

Effect of Inoculum Pretreatment on the Composition of Microbial Communities in Anaerobic Digesters Producing Volatile Fatty Acids
Cited by: 26
Author(s): Lucía Blasco, Minna Kahala, Elina Tampio, Markku Vainio, Satu Ervasti, Saija Rasi
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0243297

Asymbiotic germination and morphological studies of seeds of Atlantic Rainforest micro-orchids (Pleurothallidinae)
Cited by: 3
Author(s): Franciele Marx Koene, Érika Amano, Eric de Camargo Smidt, Luciana Lopes Fortes Ribas
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0225898

Do cancer stem cells exist? A pilot study combining a systematic review with the hierarchy-of-hypotheses approach
Cited by: 9
Author(s): Isabelle Bartram, Jonathan M. Jeschke
Software Mentions: 2
Published: over 6 years ago

10.3389/fvets.2020.00115

Effects of Tilmicosin Treatment on the Nasopharyngeal Microbiota of Feedlot Cattle With Respiratory Disease During the First Week of Clinical Recovery
Cited by: 7
Author(s): Mohamed Zeineldin, James Lowe, Brian Aldridge
Software Mentions: 2
Published: over 6 years ago

10.3389/fvets.2019.00354

Respiratory Dysbiosis in Canine Bacterial Pneumonia: Standard Culture vs. Microbiome Sequencing
Cited by: 14
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0033819

A 3-Year Study Reveals That Plant Growth Stage, Season and Field Site Affect Soil Fungal Communities while Cultivar and GM-Trait Have Minor Effects
Cited by: 57
Author(s): S. Emilia Hannula, Wietse de Boer, Johannes van Veen
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0166765

Deforestation Impacts on Bat Functional Diversity in Tropical Landscapes
Cited by: 44
Author(s): Rodrigo García‐Morales, Claudia E. Moreno, Ernesto I. Badano, Iriana Zuria, Jorge Galindo‐González, Alberto E. Rojas-Martínez, Eva Samanta Ávila-Gómez
Software Mentions: 2
Published: over 9 years ago

10.1007/s11103-020-00973-5

Precise evaluation of tissue culture-induced variation during optimisation of in vitro regeneration regime in barley
Cited by: 20
Author(s): Renata Orłowska, Piotr Tomasz Bednarek
Software Mentions: 2
Published: over 6 years ago

10.3390/genes10100827

Comparative Study of Gut Microbiota in Wild and Captive Giant Pandas (Ailuropoda melanoleuca)
Cited by: 54
Author(s): Wei Guo, Saurabh Mishra, Chengdong Wang, Hemin Zhang, Ruihong Ning, Fanli Kong, Bo Zeng, Jiangchao Zhao, Ying Liu
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0251065

Assessment of some key indicators of the ecological status of an African freshwater lagoon (Lagoon Aghien, Ivory Coast)
Cited by: 8
Author(s): Mathias Koffi Ahoutou, Rosine Yao Djeha, Eric Kouamé Yao, Catherine Quiblier, Julie Niamen-Ebrottié, Sahima Hamlaoui, Kevin Tambosco, Jean-Louis Perrin, Marc Troussellier, Cécile Bernard, Luc Séguis, Marc Bouvy, Jacques Pédron, Félix Koffi Konan, Jean‐François Humbert, Julien Kalpy Coulibaly
Software Mentions: 2
Published: over 5 years ago

10.1007/s11103-015-0368-0

Tissue culture-induced genetic and epigenetic variation in triticale (× Triticosecale spp. Wittmack ex A. Camus 1927) regenerants
Cited by: 50
Author(s): Joanna Machczyńska, J. Zimny, Piotr Tomasz Bednarek
Software Mentions: 2
Published: almost 11 years ago

10.3390/microorganisms9081657

Oral Microbiota Identifies Patients in Early Onset Rheumatoid Arthritis
Cited by: 20
Author(s): Anders Esberg, Linda Johansson, Ingegerd Johansson, Solbritt Rantapää-Dahlqvist
Software Mentions: 2
Published: about 5 years ago

10.3390/genes12040535

Metagenomics Assessment of Soil Fertilization on the Chemotaxis and Disease Suppressive Genes Abundance in the Maize Rhizosphere
Cited by: 6
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 5 years ago

10.3390/genes12071022

The Influence of Soil Fertilization on the Distribution and Diversity of Phosphorus Cycling Genes and Microbes Community of Maize Rhizosphere Using Shotgun Metagenomics
Cited by: 12
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: about 5 years ago

10.3390/genes12091431

Metagenomic Analyses of Plant Growth-Promoting and Carbon-Cycling Genes in Maize Rhizosphere Soils with Distinct Land-Use and Management Histories
Cited by: 9
Author(s): Chinenyenwa Fortune Chukwuneme, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
Software Mentions: 2
Published: almost 5 years ago

10.3390/ani11020367

Establishing Cell Lines from Fresh or Cryopreserved Tissue from the Great Crested Newt (Triturus cristatus): A Preliminary Protocol
Cited by: 4
Author(s): Julie Strand, Henrik Callesen, Cino Pertoldi, Stig Purup
Software Mentions: 2
Published: over 5 years ago

10.1590/1678-4685-GMB-2017-0031

Ecological drivers of plant genetic diversity at the southern edge of geographical distributions: Forestal vines in a temperate region
Cited by: 7
Author(s): Michel J. F. Barros, José Alexandre Felizola Diniz‐Filho, Loreta B. Freitas
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0193153

Divergence in male sexual odor signal and genetics across populations of the red mason bee, Osmia bicornis, in Europe
Cited by: 6
Author(s): Taina Conrad, Robert J. Paxton, Guenter Assum, Manfred Ayasse
Software Mentions: 2
Published: over 8 years ago

10.3390/plants9060790

Mitigation of the Adverse Effects of the El Niño (El Niño, La Niña) Southern Oscillation (ENSO) Phenomenon and the Most Important Diseases in Avocado cv. Hass Crops
Cited by: 8
Author(s): Joaquín Guillermo Ramírez‐Gil, Juan Camilo Henao-Rojas, Juan Gonzalo Morales Osorio
Software Mentions: 2
Published: about 6 years ago

10.1016/j.geoderma.2019.01.001

Impact of conservation tillage in rice–based cropping systems on soil aggregation, carbon pools and nutrients
Cited by: 101
Author(s): Rajiv Nandan, Vikram Singh, S. K. Singh, Virender Kumar, Kali Krishna Hazra, Chaitanya Prasad Nath, Shishpal Poonia, R. K. Malik, Ranjan Bhattacharyya, Andrew J. McDonald
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0234721

Construction, analysis and validation of co-expression network to understand stress adaptation in Deinococcus radiodurans R1
Cited by: 3
Author(s): Suraj R Joshi, Surabhi Jagtap, Bhakti Basu, Deepti D. Deobagkar, Payel Ghosh
Software Mentions: 2
Published: about 6 years ago

10.1016/j.heliyon.2020.e05295

Multivariate analysis for yield and yield-related traits of sesame (Sesamum indicum L.) genotypes
Cited by: 6
Author(s): Fiseha Baraki, Zenawi Gebregergis, Yirga Belay, Muez Berhe, Goitom Teame, Mohammed Hassen, Zerabruk Gebremedhin, A Mohammad Abadi, Weres Negash, Alem Atsbeha, Goitom Araya
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0219015

Effects of sampling site, season, and substrate on foraminiferal assemblages grown from propagule banks from lagoon sediments of Corfu Island (Greece, Ionian Sea)
Cited by: 7
Author(s): Anna E. Weinmann, Susan T. Goldstein, Maria Triantaphyllou, Martin R. Langer
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0256969

Is soil management system really important? comparison of microbial community diversity and structure in soils managed under organic and conventional regimes with some view on soil properties
Cited by: 6
Author(s): Kamila Rachwał, Klaudia Gustaw, Waldemar Kazimierczak, Adam Waśko
Software Mentions: 2
Published: almost 5 years ago

10.1080/08912963.2017.1341503

Eocene sand tiger sharks (Lamniformes, Odontaspididae) from the Bolca Konservat-Lagerstätte, Italy: palaeobiology, palaeobiogeography and evolutionary significance
Cited by: 13
Author(s): Giuseppe Marramà, Andrea Engelbrecht, Giorgio Carnevale, Jürgen Kriwet
Software Mentions: 2
Published: about 9 years ago

10.1186/s43008-019-0007-5

The extremely halotolerant black yeast Hortaea werneckii - a model for intraspecific hybridization in clonal fungi
Cited by: 25
Author(s): Polona Zalar, Jerneja Zupančič, Cene Gostinčar, Janja Zajc, G.S. de Hoog, Filomena De Leo, Armando Azúa-Bustos, Nina Gunde‐Cimerman
Software Mentions: 2
Published: about 7 years ago

10.1242/bio.045674

The ventral epithelium of <i>Trichoplax adhaerens</i> deploys in distinct patterns cells that secrete digestive enzymes, mucus or diverse neuropeptides
Cited by: 24
Author(s): Tatiana D. Mayorova, Katherine Hammar, Christine A. Winters, Thomas S. Reese, Carolyn L. Smith
Software Mentions: 2
Published: over 7 years ago

10.3390/insects8030064

Monitoring Effect of Fire on Ant Assemblages in Brazilian Rupestrian Grasslands: Contrasting Effects on Ground and Arboreal Fauna
Cited by: 13
Author(s): Diego V. Anjos, Ricardo I. Campos, Renata Bernardes Faria Campos, Sérvio Pontes Ribeiro
Software Mentions: 2
Published: about 9 years ago

10.3390/ani10040585

Salmonella in Free-Ranging Quokkas (Setonix brachyurus) from Rottnest Island and the Mainland of Western Australia
Cited by: 5
Author(s): Pedro Martínez-Pérez, Timothy H. Hyndman, Patricia A. Fleming
Software Mentions: 2
Published: over 6 years ago

10.1038/srep27234

Glacial melting: an overlooked threat to Antarctic krill
Cited by: 40
Author(s): Verónica Fuentes, Gastón Alurralde, Bettina Meyer, Gastón E. Aguirre, Antonio Canepa, Anne-Cathrin Wölfl, Christian Hass, Gabriela Noemí Williams, Irene R Schloss
Software Mentions: 2
Published: about 10 years ago

10.3390/microorganisms8101484

Seasonality in Spatial Turnover of Bacterioplankton Along an Ecological Gradient in the East China Sea: Biogeographic Patterns, Processes and Drivers
Cited by: 7
Author(s): Hanjing Hu, Jiaying He, Huizhen Yan, Dandi Hou, Demin Zhang, Lian Liu, Kai Wang
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0072126

The Nitrate Transporter (NRT) Gene Family in Poplar
Cited by: 79
Author(s): Hua Bai, Dejuan Euring, Katharina Volmer, Dennis Janz, Andrea Polle
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0131607

Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals
Cited by: 46
Author(s): Yukuto Sato, Junya Yamagishi, Riu Yamashita, Natsuko O. Shinozaki, Bin Yue, Takuji Yamada, Masayuki Yamamoto, Masao Nagasaki, Akito Tsuboi
Software Mentions: 2
Published: about 11 years ago

10.1186/s12864-015-2340-4

Effect of roughage on rumen microbiota composition in the efficient feed converter and sturdy Indian Jaffrabadi buffalo (Bubalus bubalis)
Cited by: 37
Author(s): Neelam M. Nathani, Amrutlal K. Patel, Malathi Shekar, Bhaskar Reddy, S. V. Shah, Pravin M. Lunagaria, Ramesh Kothari, Chaitanya G. Joshi
Software Mentions: 2
Published: over 10 years ago

10.1038/srep31447

Simulated leakage of high pCO2 water negatively impacts bivalve dominated infaunal communities from the Western Baltic Sea
Cited by: 21
Author(s): Hanna Schade, Lisa Mevenkamp, Katja Guilini, Stefanie Meyer, Stanislav N. Gorb, Doris Abele, Alexandra Vanreusel, Frank Melzner
Software Mentions: 2
Published: almost 10 years ago

10.1038/srep33013

Rate of biological invasions is lower in coastal marine protected areas
Cited by: 24
Author(s): Alba Ardura, Francis Juanes, Serge Planes, Eva García‐Vázquez
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12864-015-1862-0

Lasting effects of early exposure to temperature on the gonadal transcriptome at the time of sex differentiation in the European sea bass, a fish with mixed genetic and environmental sex determination
Cited by: 66
Author(s): Noèlia Díaz, Francesc Piferrer
Software Mentions: 2
Published: almost 11 years ago

10.1093/aobpla/plt032

Phenotypic characters of rice landraces reveal independent lineages of short-grain aromatic indica rice
Cited by: 21
Author(s): Avik Ray, Debal Deb, Rajasri Ray, Balaji Chattopadhayay
Software Mentions: 2
Published: over 13 years ago

10.1186/s13568-019-0770-0

Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus
Cited by: 13
Author(s): Wei Feng, Jing Zhang, Ivan Jakovlić, Fan Xiong, Shangong Wu, Hong Zou, Wenxiang Li, Ming Li, Guitang Wang
Software Mentions: 2
Published: over 7 years ago

10.3390/biology10070569

Identifying Hidden Viable Bacterial Taxa in Tropical Forest Soils Using Amplicon Sequencing of Enrichment Cultures
Cited by: 5
Author(s): Chakriya Sansupa, Sara Fareed Mohamed Wahdan, Terd Disayathanoowat, Witoon Purahong
Software Mentions: 2
Published: about 5 years ago

10.1038/srep36645

Tracking modern human population history from linguistic and cranial phenotype
Cited by: 11
Author(s): Hugo Reyes-Centeno, Katerina Harvati, Gerhard Jäger
Software Mentions: 2
Published: almost 10 years ago

10.3390/microorganisms8060938

Sex-Specific Associations between Gut Prevotellaceae and Host Genetics on Adiposity
Cited by: 26
Author(s): Amelia Marti, José Ignacio Riezu-Boj, Elizabeth Guruceaga, Fermı́n I. Milagro, J. Alfredo Martínéz
Software Mentions: 2
Published: about 6 years ago

10.1038/srep36169

Stepwise onset of the Icehouse world and its impact on Oligo-Miocene Central Asian mammals
Cited by: 21
Author(s): Mathias Harzhauser, Gudrun Daxner-Höck, Paloma López-Guerrero, Olivier Maridet, Adriana Oliver, Werner E. Piller, Sylvain Richoz, Margarita A. Erbajeva, Thomas A. Neubauer, Ursula B. Göhlich
Software Mentions: 2
Published: over 9 years ago

10.1038/srep37753

Selection for predation, not female fecundity, explains sexual size dimorphism in the orchid mantises
Cited by: 17
Author(s): Gavin J. Svenson, Sydney K. Brannoch, Henrique M. Rodrigues, James C. O’Hanlon, Werner Frank
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0113253

Progressive Degradation of Crude Oil n-Alkanes Coupled to Methane Production under Mesophilic and Thermophilic Conditions
Cited by: 56
Author(s): Lei Cheng, Shengbao Shi, Qiang Li, Jianfa Chen, Hui Zhang, Yahai Lu
Software Mentions: 2
Published: over 11 years ago

10.3390/microorganisms7020033

Cave Drip Water-Related Samples as a Natural Environment for Aromatic Hydrocarbon-Degrading Bacteria
Cited by: 15
Author(s): Eric de Lima Silva Marques, Gislaine S. Silva, João Carlos Teixeira Dias, Eduardo Gross, Moara Silva Costa, Rachel Passos Rezende
Software Mentions: 2
Published: over 7 years ago

10.1038/srep42278

Linking gene expression to productivity to unravel long- and short-term responses of seagrasses exposed to CO2 in volcanic vents
Cited by: 20
Author(s): Irene Olivé, João Silva, Chiara Lauritano, Monya M. Costa, Miriam Ruocco, Gabriele Procaccini, Rui Santos
Software Mentions: 2
Published: over 9 years ago

10.1038/srep44382

Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar
Cited by: 134
Author(s): Amit K. Jaiswal, Y. Elad, Indira Paudel, Ellen R. Graber, Eddie Cytryn, Omer Frenkel
Software Mentions: 2
Published: over 9 years ago

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