Ecosyste.ms: Papers

10.3389/fmicb.2016.01782

Distinct Factors Shape Aquatic and Sedimentary Microbial Community Structures in the Lakes of Western China
Cited by: 47
Author(s): Jian Yang, Hongchen Jiang, Geng Wu, Wen Li, Guojing Zhang
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2018.03275

The Influence of Bt Maize Cultivation on Communities of Arbuscular Mycorrhizal Fungi Revealed by MiSeq Sequencing
Cited by: 15
Author(s): Huilan Zeng, Wang Zhong, Fengxiao Tan, Yinghua Shu, Ying Feng, Jianwu Wang
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2015.00379

Cropping systems modulate the rate and magnitude of soil microbial autotrophic CO2 fixation in soil
Cited by: 39
Author(s): Xin Wu, Tida Ge, Wei Wang, Yuan Huang, Carl‐Eric Wegner, Zhenke Zhu, Andrew S. Whiteley, Jinshui Wu
Software Mentions: 2
Published: over 9 years ago

10.1264/jsme2.ME14119

Increase in Bacterial Colony Formation from a Permafrost Ice Wedge Dosed with a <i>Tomitella biformata</i> Recombinant Resuscitation-Promoting Factor Protein
Cited by: 9
Author(s): Indun Dewi Puspita, Wataru Kitagawa, Yoichi Kamagata, Michiko Tanaka, Cindy H. Nakatsu
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2020.00012

The Role of Microbial Mats in the Removal of Hexavalent Chromium and Associated Shifts in Their Bacterial Community Composition
Cited by: 11
Author(s): Raeid M. M. Abed, Mary Shanti, T. S. Muthukrishnan, Zayana Al-Riyami, Bernhard Pracejus, Daniel Moraetis
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2018.01796

Biases in Prokaryotic Community Amplicon Sequencing Affected by DNA Extraction Methods in Both Saline and Non-saline Soil
Cited by: 12
Author(s): Kehui Xie, Yong Deng, Xuze Zhang, Xueting Wang, Guangbo Kang, Liang Bai, He Huang
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.01414

Effect of Single Dose of Antimicrobial Administration at Birth on Fecal Microbiota Development and Prevalence of Antimicrobial Resistance Genes in Piglets
Cited by: 14
Author(s): Mohamed Zeineldin, Ameer Megahed, Brandi Burton, Benjamin Blair, Brian Aldridge, James Lowe
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.01385

Bacteria Associated to Plants Naturally Selected in a Historical PCB Polluted Soil Show Potential to Sustain Natural Attenuation
Cited by: 23
Author(s): Lorenzo Vergani, Francesca Mapelli, Ramona Marasco, Elena Crotti, Marco Fusi, Antonio Di Guardo, Stefano Armiraglio, Daniele Daffonchio, Sara Borin
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2017.00245

Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments
Cited by: 44
Author(s): Julio Bohórquez, Terry J. McGenity, Sokratis Papaspyrou, Emilio García‐Robledo, Alfonso Corzo, Graham J. C. Underwood
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.1197

Cranial and mandibular shape variation in the genus<i>Carollia</i>(Mammalia: Chiroptera) from Colombia: biogeographic patterns and morphological modularity
Cited by: 16
Author(s): Camilo López‐Aguirre, Jairo Pérez‐Torres, L. T. Wilson
Software Mentions: 2
Published: over 9 years ago

10.3897/zookeys.140.1925

Triteleia peyerimhoffi comb. n., a remarkably variable circum-Mediterranean scelionid (Hymenoptera, Platygastroidea)
Cited by: 5
Author(s): Ovidiu Alin Popovici, Ferdinando Bin, Lubomír Masner, M. Popovici, David G. Notton
Software Mentions: 2
Published: about 13 years ago

10.7717/peerj.2496

Highly divergent mussel lineages in isolated Indonesian marine lakes
Cited by: 18
Author(s): Leontine E. Becking, Christiaan A. de Leeuw, Bram Knegt, Diede L. Maas, Nicole J. de Voogd, Abdunnur Abdunnur, Iwan Suyatna, Katja T. C. A. Peijnenburg
Software Mentions: 2
Published: about 8 years ago

10.1007/s13205-016-0546-z

Diversity of bacteria and archaea in the rhizosphere of bioenergy crop Jatropha curcas
Cited by: 13
Author(s): Garima Dubey, Bharati Kollah, V. K. Gour, Arvind Kumar Shukla, Santosh Ranjan Mohanty
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2014.00786

Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea
Cited by: 33
Author(s): Carlo Berg, Luisa Listmann, Verona Vandieken, Angela Vogts, Klaus Jürgens
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2012.00422

Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change
Cited by: 51
Author(s): Sophie Charvet, Warwick F. Vincent, A. Comeau, Connie Lovejoy
Software Mentions: 2
Published: almost 13 years ago

10.1264/jsme2.ME18108

Effects of the Wastewater Flow Rate on Interactions between the Genus &lt;i&gt;Nitrosomonas&lt;/i&gt; and Diverse Populations in an Activated Sludge Microbiome
Cited by: 6
Author(s): Takashi Narihiro, Masaru K. Nobu, Tomoyuki Hori, Tomo Aoyagi, Yuya Sato, Tomohiro Inaba, Hitoshi Aizawa, Hideyuki Tamaki, Hiroshi Habe
Software Mentions: 2
Published: almost 6 years ago

10.7717/peerj.10248

Diversity of edible insects in a Natural World Heritage Site of India: entomophagy attitudes and implications for food security in the region
Cited by: 8
Author(s): Arup Kumar Hazarika, Unmilan Kalita, Subhash Khanna, Tarali Kalita, Sangeeta Choudhury
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2016.01612

Interactions between Obesity Status and Dietary Intake of Monounsaturated and Polyunsaturated Oils on Human Gut Microbiome Profiles in the Canola Oil Multicenter Intervention Trial (COMIT)
Cited by: 60
Author(s): Shuaihua Pu, Hamidreza Khazanehei, Peter J H Jones, Ehsan Khafipour
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2017.00593

Microbial and Isotopic Evidence for Methane Cycling in Hydrocarbon-Containing Groundwater from the Pennsylvania Region
Cited by: 26
Author(s): Adrien Vigneron, Andrew N. Bishop, Eric Alsop, Kellie Hull, Ileana Rhodes, R. C. Hendricks, Ian M. Head, Nicolas Tsesmetzis
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.10103

The role of geomorphic zonation in long-term changes in coral-community structure on a Caribbean fringing reef
Cited by: 5
Author(s): Alexis Enrique Medina-Valmaseda, Rosa E. Rodríguez-Martínez, Lorenzo Álvarez‐Filip, Eric Jordán-Dahlgren, Paul Blanchon
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2019.01712

Indigenous Yeast Interactions in Dual-Starter Fermentations May Improve the Varietal Expression of Moschofilero Wine
Cited by: 19
Author(s): Aspasia Nisiotou, Athanasios Mallouchos, Chrysoula C. Tassou, Georgios Banilas
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.01231

Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
Cited by: 26
Author(s): Yiseul Kim, William Van Bonn, Tiong Gim Aw, Joan B. Rose
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2019.00171

Modulation of Intestinal Microbiota in Solea senegalensis Fed Low Dietary Level of Ulva ohnoi
Cited by: 24
Author(s): Silvana Tapia‐Paniagua, Milena Fumanal, Victoria Anguís, Catalina Fernández‐Díaz, Francisco Javier Alarcón, Miguel A. Moriñigo, M.C. Balebona
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2016.00666

Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities
Cited by: 19
Author(s): Ali Nawaz, Witoon Purahong, Robert Lehmann, Martina Herrmann, Kirsten Küsel, Kai Uwe Totsche, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 8 years ago

10.7717/peerj.6392

Diverse microbial communities hosted by the model carnivorous pitcher plant <i>Sarracenia purpurea</i>: analysis of both bacterial and eukaryotic composition across distinct host plant populations
Cited by: 8
Author(s): Jacob J. Grothjan, Erica B. Young
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12862-016-0761-6

Unappreciated diversification of stem archosaurs during the Middle Triassic predated the dominance of dinosaurs
Cited by: 46
Author(s): Christian Foth, Martín D. Ezcurra, Roland B. Sookias, Stephen L. Brusatte, Richard J. Butler
Software Mentions: 2
Published: about 8 years ago

10.7717/peerj.6891

Dietary supplementation of black soldier fly (<i>Hermetica illucens)</i>meal modulates gut microbiota, innate immune response and health status of marron (<i>Cherax cainii</i>, Austin 2002) fed poultry-by-product and fishmeal based diets
Cited by: 37
Author(s): Javed Foysal, Ravi Fotedar, Chin Yen Tay, Sanjay Kumar Gupta
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2016.01341

Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Cited by: 59
Author(s): Lucas Dantas Lopes, Michele de Cássia Pereira e Silva, Fernando Dini Andreote
Software Mentions: 2
Published: about 8 years ago

10.7717/peerj.5494

The impact of chemerin or chemokine-like receptor 1 loss on the mouse gut microbiome
Cited by: 9
Author(s): Helen J. Dranse, Ashlee Zheng, A. Comeau, Morgan G. I. Langille, Brian A. Zabel, Christopher J. Sinal
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2020.01352

Galactooligosaccharides and Resistant Starch Altered Microbiota and Short-Chain Fatty Acids in an in vitro Fermentation Study Using Gut Contents of Mud Crab (Scylla paramamosain)
Cited by: 19
Author(s): Ngoc Tuan Tran, Yong Tang, Zhongzhen Li, Ming Zou, Xiaobo Wen, Hongyu Ma, Shengkang Li
Software Mentions: 2
Published: over 4 years ago

10.3390/biology10070637

Unveiling the Fecal Microbiota in Two Captive Mexican Wolf (Canis lupus baileyi) Populations Receiving Different Type of Diets
Cited by: 2
Author(s): Sergio I. Barraza-Guerrero, César A. Meza-Herrera, Cristina García-De la Peña, Verónica Ávila-Rodríguez, Felipe Vaca-Paniagua, Clara Díaz-Velásquez, Irene Pacheco-Torres, Mónica Valdez-Solana, Quetzaly K. Siller-Rodríguez, Luis Manuel Valenzuela-Núñez, Juan C. Herrera-Salazar
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2021.679162

Screening and Mapping for Head Blast Resistance in a Panel of CIMMYT and South Asian Bread Wheat Germplasm
Cited by: 15
Author(s): Xinyao He, Philomin Juliana, Muhammad Rezaul Kabir, Krishna Kanta Roy, Rabiul Islam, Félix Marza, Gary L. Peterson, Gyanendra Singh, Aakash Chawade, Arun Kumar Joshi, Ravi P. Singh, Pawan Kumar Singh
Software Mentions: 2
Published: over 3 years ago

10.3389/fncel.2016.00152

A Novel Form of Compensation in the Tg2576 Amyloid Mouse Model of Alzheimer’s Disease
Cited by: 5
Author(s): Attila Somogyi, Zoltán Katonai, Alán Alpár, Ervin Wolf
Software Mentions: 2
Published: over 8 years ago

10.3389/fgene.2021.676791

Day 7 Embryos Change the Proteomics and Exosomal Micro-RNAs Content of Bovine Uterine Fluid: Involvement of Innate Immune Functions
Cited by: 5
Author(s): Kaoru Kusama, Mohammad Bazlur Rashid, Rasoul Kowsar, Mohamed Ali Marey, Anup Kumar Talukder, Kentaro Nagaoka, M. Shimada, Hasan Khatib, Kazuhiko Imakawa, Akio Miyamoto
Software Mentions: 2
Published: over 3 years ago

10.3390/foods9050595

Molecular Characterization and Enological Potential of A High Lactic Acid-Producing Lachancea thermotolerans Vineyard Strain
Cited by: 27
Author(s): Georgios Sgouros, Athanasios Mallouchos, Maria-Evangelia Filippousi, Georgios Banilas, Aspasia Nisiotou
Software Mentions: 2
Published: over 4 years ago

10.1128/AEM.00181-18

Crown-of-Thorns Sea Star Acanthaster cf. solaris Has Tissue-Characteristic Microbiomes with Potential Roles in Health and Reproduction
Cited by: 17
Author(s): Lone Høj, Natalie Levy, Brett K. Baillie, Peta L. Clode, Raphael C. Strohmaier, Nachshon Siboni, Nicole S. Webster, Sven Uthicke, David G. Bourne
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2018.01996

Identification of Distinct Unmutated Chronic Lymphocytic Leukemia Subsets in Mice Based on Their T Cell Dependency
Cited by: 7
Author(s): Simar Pal Singh, Marjolein J. W. de Bruijn, Mariana P. de Almeida, Ruud W. J. Meijers, Lars Nitschke, Anton W. Langerak, Saravanan Y. Pillai, Ralph Stadhouders, Rudolf W. Hendriks
Software Mentions: 2
Published: about 6 years ago

10.7717/peerj.10184

Comparative analysis of the metabolically active microbial communities in the rumen of dromedary camels under different feeding systems using total rRNA sequencing
Cited by: 11
Author(s): Alaa Emara Rabee, Robert J. Forster, Chijioke O. Elekwachi, Ebrahim A. Sabra, Mebarek Lamara
Software Mentions: 2
Published: about 4 years ago

10.1186/s13072-017-0165-x

Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning
Cited by: 17
Author(s): Gabriel Gutiérrez, Gonzalo Millán-Zambrano, Daniel A. Medina, Antonio Jordán-Pla, Jose E. Pérez-Ortı́n, Xenia Peñate, Sebastián Chávez
Software Mentions: 2
Published: almost 7 years ago

10.7717/peerj.4809

A quantitative approach to determine the taxonomic identity and ontogeny of the pycnodontiform fish<i>Pycnodus</i>(Neopterygii, Actinopterygii) from the Eocene of Bolca Lagerstätte, Italy
Cited by: 7
Author(s): John Joseph Cawley, Giuseppe Marramà, Giorgio Carnevale, Jürgen Kriwet
Software Mentions: 2
Published: over 6 years ago

10.3897/zookeys.801.22829

The role of urban forest patches in maintaining isopod diversity (Oniscidea)
Cited by: 4
Author(s): Elisabeth Hornung, Andrea Kásler, Zsolt Tóth
Software Mentions: 2
Published: almost 6 years ago

10.1007/s10493-020-00587-y

Patterns of intraspecific morphological variability in soil mites reflect their dispersal ability
Cited by: 1
Author(s): Julia Baumann
Software Mentions: 2
Published: almost 4 years ago

10.1007/s00267-017-0833-4

Specific Vicariance of Two Primeval Lowland Forest Lichen Indicators
Cited by: 7
Author(s): Dariusz Kubiak, Piotr Osyczka
Software Mentions: 2
Published: almost 8 years ago

10.1007/s10661-017-6135-8

Trace element concentrations in livers of Common Buzzards Buteo buteo from eastern Poland
Cited by: 5
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak, Grzegorz Pitucha
Software Mentions: 2
Published: over 7 years ago

10.3390/ani10040585

Salmonella in Free-Ranging Quokkas (Setonix brachyurus) from Rottnest Island and the Mainland of Western Australia
Cited by: 5
Author(s): Pedro Martínez-Pérez, Timothy H. Hyndman, Patricia A. Fleming
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2019.02969

Forage Rotations Conserve Diversity of Arbuscular Mycorrhizal Fungi and Soil Fertility
Cited by: 26
Author(s): Elisa Pellegrino, Hannes A. Gamper, Valentina Ciccolini, Laura Ercoli
Software Mentions: 2
Published: almost 5 years ago

10.1002/ece3.3074

Dampening of population cycles in voles affects small mammal community structure, decreases diversity, and increases prevalence of a zoonotic disease
Cited by: 21
Author(s): Frauke Ecke, David G. Angeler, Магнус Магнуссон, Hussein Khalil, Birger Hörnfeldt
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0223932

Evaluation of bacterial proliferation with a microfluidic-based device: Antibiochip
Cited by: 0
Author(s): Valentina Gallo, Alessia Ruiba, Massimo Zanin, Paolo Begnamino, S. Ledda, Tiziana Pesce, Giovanni Melioli, M. Pizzi
Software Mentions: 2
Published: over 4 years ago

10.1002/ece3.6504

Hidden diversity in Antarctica: Molecular and morphological evidence of two different species within one of the most conspicuous ascidian species
Cited by: 6
Author(s): Micaela Ruiz, Anabela Taverna, Natalia Servetto, Ricardo Sahade, Christoph Held
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0200796

Signs of continental ancestry in urban populations of Peru through autosomal STR loci and mitochondrial DNA typing
Cited by: 7
Author(s): Francesco Messina, Tullia Di Corcia, Michele Ragazzo, Cesar Sanchez Mellado, Irene Contini, Patrizia Malaspina, Bianca Maria Ciminelli, Olga Rickards, Carla Jodice
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0068429

Invasion Is a Community Affair: Clandestine Followers in the Bacterial Community Associated to Green Algae, Caulerpa racemosa, Track the Invasion Source
Cited by: 58
Author(s): Tânia Aires, Ester A. Serrão, Gary A. Kendrick, Carlos M. Duarte, Sophie Arnaud–Haond
Software Mentions: 2
Published: over 11 years ago

10.1186/1471-2148-11-115

Parallel evolution controlled by adaptation and covariation in ammonoid cephalopods
Cited by: 50
Author(s): Claude Monnet, Kenneth De Baets, Christian Klug
Software Mentions: 2
Published: over 13 years ago

10.1002/ece3.2220

Leaf litter arthropod responses to tropical forest restoration
Cited by: 54
Author(s): Rebecca J. Cole, Karen D. Holl, Rakan A. Zahawi, Philipp Wickey, Alan R. Townsend
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0168933

Colonization in North American Arid Lands: The Journey of Agarito (Berberis trifoliolata) Revealed by Multilocus Molecular Data and Packrat Midden Fossil Remains
Cited by: 17
Author(s): Diego F. Angulo, Leonardo Amarilla, Ana M. Antón, Victoria Sosa
Software Mentions: 2
Published: almost 8 years ago

10.1093/aobpla/plt032

Phenotypic characters of rice landraces reveal independent lineages of short-grain aromatic indica rice
Cited by: 21
Author(s): Avik Ray, Debal Deb, Rajasri Ray, Balaji Chattopadhayay
Software Mentions: 2
Published: almost 12 years ago

10.1371/journal.pone.0155239

Effects of Dispersal and Initial Diversity on the Composition and Functional Performance of Bacterial Communities
Cited by: 22
Author(s): Yinghua Zha, Mercè Berga, Jérôme Comte, Silke Langenheder
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0225369

Normal and altered masticatory load impact on the range of craniofacial shape variation: An analysis of pre-Hispanic and modern populations of the American Southern Cone
Cited by: 12
Author(s): Andrea Eyquem, Susan Kuzminsky, J. Tor Aguilera, Williams Astudillo, Viviana Toro‐Ibacache
Software Mentions: 2
Published: almost 5 years ago

10.7717/peerj.7588

Long-term studies reveal major environmental factors driving zooplankton dynamics and periodicities in the Black Sea coastal zooplankton
Cited by: 2
Author(s): Alexander L. Vereshchaka, L. L. Anokhina, T. A. Lukasheva, Anastasia A. Lunina
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.5040

Different responses of avian feeding guilds to spatial and environmental factors across an elevation gradient in the central Himalaya
Cited by: 21
Author(s): Zhifeng Ding, Jiankun Liang, Yiming Hu, Zhixin Zhou, Sun Hongbin, Lina Liu, Haijun Liu, Huijian Hu, Xingfeng Si
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0207495

Prevalence of gastrointestinal parasites in bonnet macaque and possible consequences of their unmanaged relocations
Cited by: 11
Author(s): Shanthala Kumar, P. Sundararaj, Honnavalli N. Kumara, Arijit Pal, Kumar Santhosh, S. Vinoth
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0240685

Ecological status of a freshwater tectonic lake of the indo-burmese province: Implications for livelihood development
Cited by: 0
Author(s): Arup Kumar Hazarika, Unmilan Kalita, Rev. George Michael, Saroj Panthi, Dulumoni Das
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0202446

Ruminal methane emissions, metabolic, and microbial profile of Holstein steers fed forage and concentrate, separately or as a total mixed ration
Cited by: 24
Author(s): Rajaraman Bharanidharan, Selvaraj Arokiyaraj, Eun Bae Kim, Young Moo Lee, Yang Won Woo, Youngjun Na, Danil Kim, Kyoung Hoon Kim
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0243848

Influence of vintage, geographic location and cultivar on the structure of microbial communities associated with the grapevine rhizosphere in vineyards of San Juan Province, Argentina
Cited by: 13
Author(s): Mónica Oyuela Aguilar, Alex Gobbi, Patrick Browne, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen, Liliana Semorile, Mariano Pistorio
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0038319

Microbial and Chemical Characterization of Underwater Fresh Water Springs in the Dead Sea
Cited by: 136
Author(s): Danny Ionescu, Christian Siebert, Lùbos Polerecký, Yaniv Y. Munwes, Christian Lott, Stefan Häusler, Mina Bižić-Ionescu, Christian Quast, Jörg Peplies, Frank Oliver Glöckner, Alban Ramette, Tino Rödiger, Thorsten Dittmar, Aharon Oren, Stefan Geyer, Hans‐Joachim Stärk, Martin Sauter, Tobias Licha, Jonathan B. Laronne, Dirk de Beer
Software Mentions: 2
Published: over 12 years ago

10.1186/s13071-018-3036-9

Mosquito microbiota cluster by host sampling location
Cited by: 52
Author(s): Ephantus J. Muturi, Doris Lagos‐Kutz, Christopher A. Dunlap, José L. Ramirez, Alejandro P. Rooney, G. L. Hartman, Christopher J. Fields, Gloria Rendon, Chang‐Hyun Kim
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0036866

A Proposed Taxonomy of Anaerobic Fungi (Class Neocallimastigomycetes) Suitable for Large-Scale Sequence-Based Community Structure Analysis
Cited by: 95
Author(s): Sandra Kittelmann, Graham E. Naylor, J. Koolaard, Peter H. Janssen
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0078761

Additive Partitioning of Coral Reef Fish Diversity across Hierarchical Spatial Scales throughout the Caribbean
Cited by: 20
Author(s): Vanessa Francisco, Jesús Ernesto Arias‐González
Software Mentions: 2
Published: about 11 years ago

10.1186/s13071-020-04408-4

Culex pipiens and Culex restuans egg rafts harbor diverse bacterial communities compared to their midgut tissues
Cited by: 2
Author(s): Elijah O. Juma, Chang‐Hyun Kim, Christopher A. Dunlap, Brian F. Allan, Chris Stone
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2148-10-95

Discrimination of different species from the genus Drosophila by intact protein profiling using matrix-assisted laser desorption ionization mass spectrometry
Cited by: 78
Author(s): Ralph Feltens, Renate Görner, Stefan Kalkhof, Helke Gröger-Arndt, Martin von Bergen
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0001682

Diversity Arrays Technology (DArT) for Pan-Genomic Evolutionary Studies of Non-Model Organisms
Cited by: 54
Author(s): Karen E. James, Harald Schneider, Stephen W. Ansell, Margaret Evers, Lavinia Robba, Grzegorz Uszyński, Niklas Pedersen, Angela E. Newton, Stephen J. Russell, Johannes Vogel, Andrzej Kilian
Software Mentions: 2
Published: over 16 years ago

10.1007/s00227-017-3126-9

The relative effects of upwelling and river flow on the phytoplankton diversity patterns in the ria of A Coruña (NW Spain)
Cited by: 12
Author(s): Antonio Bode, Manuel Varela, Ricardo Prego, F. Rozada, Martín D Santos
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0234627

Cuscuta seeds: Diversity and evolution, value for systematics/identification and exploration of allometric relationships
Cited by: 10
Author(s): Magdalena Olszewski, Meghan Dilliott, Ignacio García-Ruíz, Behrang Bendarvandi, Mihai Costea
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0218838

Spatial distribution of epibionts on olive ridley sea turtles at Playa Ostional, Costa Rica
Cited by: 5
Author(s): Nathan J. Robinson, Emily M. Lazo-Wasem, Brett Oliver Butler, Eric A. Lazo-Wasem, John D. Zardus, Theodora Pinou
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.1828

Patterns of contact call differentiation in the panmictic East African Abyssinian White‐eye Z osterops abyssinicus (Aves: Passeriformes)
Cited by: 3
Author(s): Jan Christian Habel, Martin Husemann, Werner Ulrich
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0256969

Is soil management system really important? comparison of microbial community diversity and structure in soils managed under organic and conventional regimes with some view on soil properties
Cited by: 6
Author(s): Kamila Rachwał, Klaudia Gustaw, Waldemar Kazimierczak, Adam Waśko
Software Mentions: 2
Published: about 3 years ago

10.1371/journal.pone.0131607

Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals
Cited by: 46
Author(s): Yukuto Sato, Junya Yamagishi, Riu Yamashita, Natsuko O. Shinozaki, Bin Yue, Takuji Yamada, Masayuki Yamamoto, Masao Nagasaki, Akito Tsuboi
Software Mentions: 2
Published: over 9 years ago

10.1186/s13071-019-3510-z

Effect of intestinal tapeworms on the gut microbiota of the common carp, Cyprinus carpio
Cited by: 19
Author(s): Pei P. Fu, Fan Xiong, Wen W. Feng, Hong Zou, Shan Wu, Ming Li, Gui T. Wang, Wen X. Li
Software Mentions: 2
Published: over 5 years ago

10.1093/aobpla/plab035

Functional traits predict resident plant response to <i>Reynoutria japonica</i> invasion in riparian and fallow communities in southern Poland
Cited by: 3
Author(s): Marcin W. Woch, Paweł Kapusta, Małgorzata Stanek, Szymon Zubek, Anna M. Stefanowicz
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0113253

Progressive Degradation of Crude Oil n-Alkanes Coupled to Methane Production under Mesophilic and Thermophilic Conditions
Cited by: 56
Author(s): Lei Cheng, Shengbao Shi, Qiang Li, Jianfa Chen, Hui Zhang, Yahai Lu
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0193153

Divergence in male sexual odor signal and genetics across populations of the red mason bee, Osmia bicornis, in Europe
Cited by: 6
Author(s): Taina Conrad, Robert J. Paxton, Guenter Assum, Manfred Ayasse
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0234721

Construction, analysis and validation of co-expression network to understand stress adaptation in Deinococcus radiodurans R1
Cited by: 3
Author(s): Suraj R Joshi, Surabhi Jagtap, Bhakti Basu, Deepti D. Deobagkar, Payel Ghosh
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0166765

Deforestation Impacts on Bat Functional Diversity in Tropical Landscapes
Cited by: 44
Author(s): Rodrigo García‐Morales, Claudia E. Moreno, Ernesto I. Badano, Iriana Zuria, Jorge Galindo‐González, Alberto E. Rojas-Martínez, Eva Samanta Ávila-Gómez
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0072126

The Nitrate Transporter (NRT) Gene Family in Poplar
Cited by: 79
Author(s): Hua Bai, Dejuan Euring, Katharina Volmer, Dennis Janz, Andrea Polle
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0251065

Assessment of some key indicators of the ecological status of an African freshwater lagoon (Lagoon Aghien, Ivory Coast)
Cited by: 8
Author(s): Mathias Koffi Ahoutou, Rosine Yao Djeha, Eric Kouamé Yao, Catherine Quiblier, Julie Niamen-Ebrottié, Sahima Hamlaoui, Kevin Tambosco, Jean-Louis Perrin, Marc Troussellier, Cécile Bernard, Luc Séguis, Marc Bouvy, Jacques Pédron, Félix Koffi Konan, Jean‐François Humbert, Julien Kalpy Coulibaly
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0219015

Effects of sampling site, season, and substrate on foraminiferal assemblages grown from propagule banks from lagoon sediments of Corfu Island (Greece, Ionian Sea)
Cited by: 7
Author(s): Anna E. Weinmann, Susan T. Goldstein, Maria Triantaphyllou, Martin R. Langer
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0188888

A rich diversity of opercle bone shape among teleost fishes
Cited by: 6
Author(s): Charles B. Kimmel, Clayton M. Small, Matthew L. Knope
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0033819

A 3-Year Study Reveals That Plant Growth Stage, Season and Field Site Affect Soil Fungal Communities while Cultivar and GM-Trait Have Minor Effects
Cited by: 57
Author(s): S. Emilia Hannula, Wietse de Boer, Johannes van Veen
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0243297

Asymbiotic germination and morphological studies of seeds of Atlantic Rainforest micro-orchids (Pleurothallidinae)
Cited by: 3
Author(s): Franciele Marx Koene, Érika Amano, Eric de Camargo Smidt, Luciana Lopes Fortes Ribas
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12862-016-0855-1

Asymmetry and integration of cellular morphology in Micrasterias compereana
Cited by: 21
Author(s): Jiří Neustupa
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0192349

Phylogeography and DNA-based species delimitation provide insight into the taxonomy of the polymorphic rose chafer Protaetia (Potosia) cuprea species complex (Coleoptera: Scarabaeidae: Cetoniinae) in the Western Palearctic
Cited by: 13
Author(s): Dominik Vondráček, Aneta Fuchsová, Dirk Ahrens, David Král, Petr Šípek
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0096605

Changes in the Bacterial Community of Soil from a Neutral Mine Drainage Channel
Cited by: 70
Author(s): Letícia Bianca Pereira, Renato Vicentini, Laura Maria Mariscal Ottoboni
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0225898

Do cancer stem cells exist? A pilot study combining a systematic review with the hierarchy-of-hypotheses approach
Cited by: 9
Author(s): Isabelle Bartram, Jonathan M. Jeschke
Software Mentions: 2
Published: almost 5 years ago

10.3390/ani11061825

Metagenomic Analysis of the Fecal Archaeome in Suckling Piglets Following Perinatal Tulathromycin Metaphylaxis
Cited by: 3
Author(s): Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brian Aldridge, James Lowe
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0168860

Effects of Propidium Monoazide (PMA) Treatment on Mycobiome and Bacteriome Analysis of Cystic Fibrosis Airways during Exacerbation
Cited by: 21
Author(s): Linh D. N. Nguyen, Pieter Deschaght, Sophie Merlin, Alexandre Loywick, Christophe Audebert, S. Van Daele, Éric Viscogliosi, Mario Vaneechoutte, Laurence Delhaès
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0154659

The Relative Importance of Spatial and Local Environmental Factors in Determining Beetle Assemblages in the Inner Mongolia Grassland
Cited by: 3
Author(s): Xiubo Yu, Liang Lü, Fengyan Wang, Tao Luo, Si-Si Zou, Chengbin Wang, Tingting Song, Hong‐Zhang Zhou
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0177458

Ancient mtDNA diversity reveals specific population development of wild horses in Switzerland after the Last Glacial Maximum
Cited by: 5
Author(s): Julia Elsner, Michael Hofreiter, Jörg Schibler, Angela Schlumbaum
Software Mentions: 2
Published: over 7 years ago

10.1007/s12253-019-00677-2

Inhibition of Metabolic Shift can Decrease Therapy Resistance in Human High-Grade Glioma Cells
Cited by: 13
Author(s): Gábor Petővári, Titanilla Dankó, Ildikó Krencz, Zoltán Hujber, Hajnalka Rajnai, Enikő Vetlényi, Regina Raffay, Judit Pápay, A. Jeney, Anna Sebestyén
Software Mentions: 2
Published: over 5 years ago

10.3390/md18090477

Insights into the Light Response of Skeletonema marinoi: Involvement of Ovothiol
Cited by: 13
Author(s): Alfonsina Milito, Ida Orefice, Arianna Smerilli, Immacolata Castellano, Alessandra Napolitano, Christophe Brunet, Anna Palumbo
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0153061

Biocomplexity in Populations of European Anchovy in the Adriatic Sea
Cited by: 10
Author(s): Paolo Ruggeri, Andrea Splendiani, Giulia Occhipinti, Tatiana Fioravanti, Alberto Santojanni, Iole Leonori, Andrea De Felice, Enrico Arneri, Gabriele Procaccini, Gaetano Catanese, Vjekoslav Tičina, A. Bonanno, Paola Nisi Cerioni, Massimo Giovannotti, W. Stewart Grant, Vincenzo Caputo Barucchi
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0186939

Rhizospheric microbial communities associated with wild and cultivated frankincense producing Boswellia sacra tree
Cited by: 14
Author(s): Abdul Latif Khan, Sajjad Asaf, Ahmed Al‐Rawahi, In‐Jung Lee, Ahmed Al‐Harrasi
Software Mentions: 2
Published: about 7 years ago