bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0094449

Toward Understanding the Dynamics of Microbial Communities in an Estuarine System
Cited by: 21
Author(s): Weipeng Zhang, Salim Bougouffa, Yong Wang, On On Lee, Ji Hyun Yang, Colin Chan, Xingyu Song, Pei‐Yuan Qian
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0141152

Microbial Contaminants of Cord Blood Units Identified by 16S rRNA Sequencing and by API Test System, and Antibiotic Sensitivity Profiling
Cited by: 6
Author(s): Luís França, Catarina Simões, Marco Taborda, Catarina Diogo, Milton S. da Costa
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0256969

Is soil management system really important? comparison of microbial community diversity and structure in soils managed under organic and conventional regimes with some view on soil properties
Cited by: 6
Author(s): Kamila Rachwał, Klaudia Gustaw, Waldemar Kazimierczak, Adam Waśko
Software Mentions: 2
Published: about 5 years ago

10.3390/md18090477

Insights into the Light Response of Skeletonema marinoi: Involvement of Ovothiol
Cited by: 13
Author(s): Alfonsina Milito, Ida Orefice, Arianna Smerilli, Immacolata Castellano, Alessandra Napolitano, Christophe Brunet, Anna Palumbo
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0242506

Mining the red deer genome (CerEla1.0) to develop X-and Y-chromosome-linked STR markers
Cited by: 6
Author(s): Krisztián Frank, Nóra Á. Bana, Norbert Bleier, László Sugár, János Nagy, Júlia Wilhelm, Zsófia Kálmán, Endre Barta, László Orosz, Peter A. Horn, Viktor Stéger
Software Mentions: 2
Published: almost 6 years ago

10.1007/s12253-019-00677-2

Inhibition of Metabolic Shift can Decrease Therapy Resistance in Human High-Grade Glioma Cells
Cited by: 13
Author(s): Gábor Petővári, Titanilla Dankó, Ildikó Krencz, Zoltán Hujber, Hajnalka Rajnai, Enikő Vetlényi, Regina Raffay, Judit Pápay, A. Jeney, Anna Sebestyén
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0193472

Predation and reproductive performance in two pelagic typhloplanid turbellarians
Cited by: 2
Author(s): Arnola C. Rietzler, Henri J. Dumont, Odete Rocha, M. M. Ribeiro
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0125043

Lake Tanganyika—A 'Melting Pot' of Ancient and Young Cichlid Lineages (Teleostei: Cichlidae)?
Cited by: 35
Author(s): Juliane D. Weiss, F.P.D. Cotterill, Ulrich K. Schliewen
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0222901

Variation in pickleweed root-associated microbial communities at different locations of a saline solid waste management unit contaminated with petroleum hydrocarbons
Cited by: 6
Author(s): Abdur Rahim Khan, Lara G. Reichmann, Jerald Conrad Ibal, Jae‐Ho Shin, Y. Liu, Harold P. Collins, Ben A. LePage, Norman Terry
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0237283

Fate of antibiotic resistant E. coli and antibiotic resistance genes during full scale conventional and advanced anaerobic digestion of sewage sludge
Cited by: 13
Author(s): Sky Redhead, Jeroen Nieuwland, Sandra Esteves, Do‐Hoon Lee, Dae-Wi Kim, Jordan Mathias, Chang-Jun Cha, Mark A. Toleman, Richard M. Dinsdale, Alan J. Guwy, Emma J. Hayhurst
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0080825

Variable Effects of Dispersal on Productivity of Bacterial Communities Due to Changes in Functional Trait Composition
Cited by: 19
Author(s): Ina Severin, Örjan Östman, Eva S. Lindström
Software Mentions: 2
Published: almost 13 years ago

10.1186/s13071-018-3036-9

Mosquito microbiota cluster by host sampling location
Cited by: 52
Author(s): Ephantus J. Muturi, Doris Lagos‐Kutz, Christopher A. Dunlap, José L. Ramirez, Alejandro P. Rooney, G. L. Hartman, Christopher J. Fields, Gloria Rendon, Chang‐Hyun Kim
Software Mentions: 2
Published: about 8 years ago

10.7717/peerj.9152

Phyllosphere bacterial assembly in citrus crop under conventional and ecological management
Cited by: 4
Author(s): C R Fernandes de Carvalho, Armando Cavalcante Franco Dias, Sérgio Kenji Homma, Elke Jbn Cardoso
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0159133

DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
Cited by: 35
Author(s): Berihun Gebremedhin, Øystein Flagstad, Afework Bekele, Desalegn Chala, Vegar Bakkestuen, Sanne Boessenkool, Magnus Popp, Galina Gussarova, Audun Schrøder-Nielsen, Sileshi Nemomissa, Christian Brochmann, Nils Chr. Stenseth, Laura S. Epp
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0230578

Auditory chain reaction: Effects of sound pressure and particle motion on auditory structures in fishes
Cited by: 17
Author(s): Tanja Schulz‐Mirbach, Friedrich Ladich, Alberto Mittone, Margie P. Olbinado, A. Bravin, Isabelle Pia Maiditsch, Roland R. Melzer, Petr Krysl, Martin Heß
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0120645

Genetic Structure Is Associated with Phenotypic Divergence in Floral Traits and Reproductive Investment in a High-Altitude Orchid from the Iron Quadrangle, Southeastern Brazil
Cited by: 14
Author(s): Bruno Leles, Anderson V. Chaves, Philip L. Russo, João A. N. Batista, Maria Bernadete Lovato
Software Mentions: 2
Published: over 11 years ago

10.1186/s13071-020-04408-4

Culex pipiens and Culex restuans egg rafts harbor diverse bacterial communities compared to their midgut tissues
Cited by: 2
Author(s): Elijah O. Juma, Chang‐Hyun Kim, Christopher A. Dunlap, Brian F. Allan, Chris Stone
Software Mentions: 2
Published: about 6 years ago

10.1186/1471-2148-10-95

Discrimination of different species from the genus Drosophila by intact protein profiling using matrix-assisted laser desorption ionization mass spectrometry
Cited by: 78
Author(s): Ralph Feltens, Renate Görner, Stefan Kalkhof, Helke Gröger-Arndt, Martin von Bergen
Software Mentions: 2
Published: almost 17 years ago

10.1371/journal.pone.0195643

A snapshot of gut microbiota of an adult urban population from Western region of India
Cited by: 39
Author(s): Disha Tandon, Mohammed Monzoorul Haque, R Saravanan, Shafiq Shaikh, Pradeep Ram Angia Sriram, Ashok Kumar Dubey, Sharmila S. Mande
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0212769

Genome and secretome of Chondrostereum purpureum correspond to saprotrophic and phytopathogenic life styles
Cited by: 11
Author(s): Rocío Reina, Harald Kellner, Jaqueline Hess, Nico Jehmlich, Inmaculada García-Romera, Elisabet Aranda, Martin Hofrichter, Christiane Liers
Software Mentions: 2
Published: over 7 years ago

10.1007/s00227-017-3126-9

The relative effects of upwelling and river flow on the phytoplankton diversity patterns in the ria of A Coruña (NW Spain)
Cited by: 12
Author(s): Antonio Bode, Manuel Varela, Ricardo Prego, F. Rozada, Martín D Santos
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0117562

Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities
Cited by: 170
Author(s): Dominique A. Cowart, Miguel Pinheiro, Olivier Mouchel, Marion Maguer, Jacques Grall, Jacques Miné, Sophie Arnaud–Haond
Software Mentions: 2
Published: over 11 years ago

10.1002/ece3.6762

Genetic diversity, population structure, and gene flow analysis of lowland bamboo [<i>Oxytenanthera abyssinica</i> (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0180371

Shifts in the bacterial community composition along deep soil profiles in monospecific and mixed stands of Eucalyptus grandis and Acacia mangium
Cited by: 60
Author(s): Arthur Prudêncio de Araújo Pereira, Pedro Avelino Maia de Andrade, Daniel Bini, Ademir Durrer, Agnès Robin, J. P. Bouillet, Fernando Dini Andreote, Elke Jurandy Bran Nogueira Cardoso
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0072126

The Nitrate Transporter (NRT) Gene Family in Poplar
Cited by: 79
Author(s): Hua Bai, Dejuan Euring, Katharina Volmer, Dennis Janz, Andrea Polle
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0165035

Nestedness in Arbuscular Mycorrhizal Fungal Communities along Soil pH Gradients in Early Primary Succession: Acid-Tolerant Fungi Are pH Generalists
Cited by: 20
Author(s): Ai Kawahara, Gi-Hong An, Sachie Miyakawa, Jun Sonoda, Tatsuhiro Ezawa
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0165447

Testing Dietary Hypotheses of East African Hominines Using Buccal Dental Microwear Data
Cited by: 19
Author(s): Laura M. Martínez, Ferran Estebaranz‐Sánchez, Jordi Galbany, Alejandro Pérez‐Pérez
Software Mentions: 2
Published: almost 10 years ago

10.1186/s13071-019-3510-z

Effect of intestinal tapeworms on the gut microbiota of the common carp, Cyprinus carpio
Cited by: 19
Author(s): Pei P. Fu, Fan Xiong, Wen W. Feng, Hong Zou, Shan Wu, Ming Li, Gui T. Wang, Wen X. Li
Software Mentions: 2
Published: over 7 years ago

10.1093/aobpla/plab035

Functional traits predict resident plant response to <i>Reynoutria japonica</i> invasion in riparian and fallow communities in southern Poland
Cited by: 3
Author(s): Marcin W. Woch, Paweł Kapusta, Małgorzata Stanek, Szymon Zubek, Anna M. Stefanowicz
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0030121

Gibberellin and Auxin Influence the Diurnal Transcription Pattern of Photoreceptor Genes via CRY1a in Tomato
Cited by: 18
Author(s): Paolo Facella, Loretta Daddiego, Giovanni Giuliano, Gaetano Perrotta
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0166765

Deforestation Impacts on Bat Functional Diversity in Tropical Landscapes
Cited by: 44
Author(s): Rodrigo García‐Morales, Claudia E. Moreno, Ernesto I. Badano, Iriana Zuria, Jorge Galindo‐González, Alberto E. Rojas-Martínez, Eva Samanta Ávila-Gómez
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0251065

Assessment of some key indicators of the ecological status of an African freshwater lagoon (Lagoon Aghien, Ivory Coast)
Cited by: 8
Author(s): Mathias Koffi Ahoutou, Rosine Yao Djeha, Eric Kouamé Yao, Catherine Quiblier, Julie Niamen-Ebrottié, Sahima Hamlaoui, Kevin Tambosco, Jean-Louis Perrin, Marc Troussellier, Cécile Bernard, Luc Séguis, Marc Bouvy, Jacques Pédron, Félix Koffi Konan, Jean‐François Humbert, Julien Kalpy Coulibaly
Software Mentions: 2
Published: over 5 years ago

10.1186/s40168-018-0587-0

Estrogen-mediated gut microbiome alterations influence sexual dimorphism in metabolic syndrome in mice
Cited by: 128
Author(s): Kanakaraju Kaliannan, Ruairi C. Robertson, Kiera Murphy, Catherine Stanton, Chao Kang, Bin Wang, Lei Hao, Atul K. Bhan, Jing Kang
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0033819

A 3-Year Study Reveals That Plant Growth Stage, Season and Field Site Affect Soil Fungal Communities while Cultivar and GM-Trait Have Minor Effects
Cited by: 57
Author(s): S. Emilia Hannula, Wietse de Boer, Johannes van Veen
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0243297

Asymbiotic germination and morphological studies of seeds of Atlantic Rainforest micro-orchids (Pleurothallidinae)
Cited by: 3
Author(s): Franciele Marx Koene, Érika Amano, Eric de Camargo Smidt, Luciana Lopes Fortes Ribas
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12862-016-0855-1

Asymmetry and integration of cellular morphology in Micrasterias compereana
Cited by: 21
Author(s): Jiří Neustupa
Software Mentions: 2
Published: almost 10 years ago

10.1007/s11103-015-0368-0

Tissue culture-induced genetic and epigenetic variation in triticale (× Triticosecale spp. Wittmack ex A. Camus 1927) regenerants
Cited by: 50
Author(s): Joanna Machczyńska, J. Zimny, Piotr Tomasz Bednarek
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0225898

Do cancer stem cells exist? A pilot study combining a systematic review with the hierarchy-of-hypotheses approach
Cited by: 9
Author(s): Isabelle Bartram, Jonathan M. Jeschke
Software Mentions: 2
Published: almost 7 years ago

10.3390/ani11061825

Metagenomic Analysis of the Fecal Archaeome in Suckling Piglets Following Perinatal Tulathromycin Metaphylaxis
Cited by: 3
Author(s): Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brian Aldridge, James Lowe
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0168860

Effects of Propidium Monoazide (PMA) Treatment on Mycobiome and Bacteriome Analysis of Cystic Fibrosis Airways during Exacerbation
Cited by: 21
Author(s): Linh D. N. Nguyen, Pieter Deschaght, Sophie Merlin, Alexandre Loywick, Christophe Audebert, S. Van Daele, Éric Viscogliosi, Mario Vaneechoutte, Laurence Delhaès
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0177458

Ancient mtDNA diversity reveals specific population development of wild horses in Switzerland after the Last Glacial Maximum
Cited by: 5
Author(s): Julia Elsner, Michael Hofreiter, Jörg Schibler, Angela Schlumbaum
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0186939

Rhizospheric microbial communities associated with wild and cultivated frankincense producing Boswellia sacra tree
Cited by: 14
Author(s): Abdul Latif Khan, Sajjad Asaf, Ahmed Al‐Rawahi, In‐Jung Lee, Ahmed Al‐Harrasi
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0185187

Photosynthetic epibionts and endobionts of Pacific oyster shells from oyster reefs in rocky versus mudflat shores
Cited by: 16
Author(s): Laurent Barillé, Anthony Le Bris, Vona Méléder, Patrick Launeau, Marc Robin, Ioanna Louvrou, Lourenço Ribeiro
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0242082

Taphonomic information from the modern vertebrate death assemblage of Doñana National Park, Spain
Cited by: 4
Author(s): M. Soledad Domingo, David Manuel Martín-Perea, Catherine Badgley, Enrique Cantero, Paloma López-Guerrero, Adriana Oliver, Juan J. Negro
Software Mentions: 2
Published: almost 6 years ago

10.3389/fgene.2021.679162

Screening and Mapping for Head Blast Resistance in a Panel of CIMMYT and South Asian Bread Wheat Germplasm
Cited by: 15
Author(s): Xinyao He, Philomin Juliana, Muhammad Rezaul Kabir, Krishna Kanta Roy, Rabiul Islam, Félix Marza, Gary L. Peterson, Gyanendra Singh, Aakash Chawade, Arun Kumar Joshi, Ravi P. Singh, Pawan Kumar Singh
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0196431

Long-term changes in the planktonic cnidarian community in a mesoscale area of the NW Mediterranean
Cited by: 9
Author(s): Elena Guerrero, Josep María Gili, Jordi Grinyó, Vanesa Raya, Ana Sabatés
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0148130

Spatial Distribution of Fungal Communities in an Arable Soil
Cited by: 55
Author(s): Julia Moll, Björn Hoppe, Stephan König, Tesfaye Wubet, François Buscot, Dirk Krüger
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0029581

Shared Pattern of Endocranial Shape Asymmetries among Great Apes, Anatomically Modern Humans, and Fossil Hominins
Cited by: 66
Author(s): Antoine Balzeau, Emmanuel Gilissen, Dominique Grimaud-Hervé
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0146566

Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest
Cited by: 17
Author(s): Julia Elidia Lima-Perim, Emiliana Manesco Romagnoli, Francisco Dini‐Andreote, Ademir Durrer, Armando Cavalcante Franco Dias, Fernando Dini Andreote
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0053649

Biased Diversity Metrics Revealed by Bacterial 16S Pyrotags Derived from Different Primer Sets
Cited by: 144
Author(s): Chunye Lin, Lin Ye, Amy Tong, Si Lok, Tong Zhang
Software Mentions: 2
Published: almost 14 years ago

10.1186/s40851-018-0119-6

Testing the adaptive value of gastropod shell morphology to flow: a multidisciplinary approach based on morphometrics, computational fluid dynamics and a flow tank experiment
Cited by: 16
Author(s): Gerlien Verhaegen, Hendrik Herzog, Katrin Korsch, Gerald Kerth, M. Brede, Martín Haase
Software Mentions: 2
Published: almost 8 years ago

10.1093/aobpla/plaa004

Functional composition and diversity of leaf traits in subalpine versus alpine vegetation in the Apennines
Cited by: 18
Author(s): Angela Stanisci, Alessandro Bricca, Valentina Calabrese, Maurizio Cutini, Harald Pauli, Klaus Steinbauer, María Laura Carranza
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2016.01341

Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Cited by: 59
Author(s): Lucas Dantas Lopes, Michele de Cássia Pereira e Silva, Fernando Dini Andreote
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0234395

Mapping QTLs underpin nutrition components in aromatic rice germplasm
Cited by: 11
Author(s): Mohammad Zahidul Islam, Md. Arifuzzaman, Sarbani Banik, Mahmud Hossain, Jannatul Ferdous, M Khalequzzaman, Barry R. Pittendrigh, Motonori Tomita, M. P. Ali
Software Mentions: 2
Published: over 6 years ago

10.1186/2046-9063-10-11

Benthic infaunal community structuring in an acidified tropical estuarine system
Cited by: 15
Author(s): M. Belal Hossain, David J. Marshall
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0195345

Fungal community profiles in agricultural soils of a long-term field trial under different tillage, fertilization and crop rotation conditions analyzed by high-throughput ITS-amplicon sequencing
Cited by: 65
Author(s): Loreen Sommermann, Joerg Geistlinger, Daniel Wibberg, Annette Deubel, Jessica Zwanzig, Doreen Babin, Andreas Schlüter, Ingo Schellenberg
Software Mentions: 2
Published: over 8 years ago

10.3390/plants10051023

Regions of Chromosome 2A of Bread Wheat (Triticum aestivum L.) Associated with Variation in Physiological and Agronomical Traits under Contrasting Water Regimes
Cited by: 7
Author(s): Т. А. Пшеничникова, С. В. Осипова, Olga Smirnova, И. Н. Леонова, M. D. Permyakova, A. V. Permyakov, E. G. Rudikovskaya, Dmitrii K. Konstantinov, В. В. Верхотуров, U. Lohwasser, Andreas Börner
Software Mentions: 2
Published: over 5 years ago

10.1111/zsc.12110

Form, function and phylogeny: comparative morphometrics of Lake Tanganyika's cichlid tribe Tropheini
Cited by: 23
Author(s): Katrin A. Wanek, Christian Sturmbauer
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0232861

Greenhouse conditions in lower Eocene coastal wetlands?—Lessons from Schöningen, Northern Germany
Cited by: 3
Author(s): O. K. Lenz, Walter Riegel, Volker Wilde
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0231696

Mashes to Mashes, Crust to Crust. Presenting a novel microstructural marker for malting in the archaeological record
Cited by: 17
Author(s): A. Heiß, Marian Berihuete Azorín, Ferran Antolín, Lucy Kubiak-Martens, Elena Marinova, Elke K. Arendt, Costas G. Βiliaderis, H. Kretschmer, Athina Lazaridou, Hans‐Peter Stika, Martin Zarnkow, Mitsuhisa Baba, Niels Bleicher, Krzysztof M. Ciałowicz, Marek Chłodnicki, Irenäus Matuschik, Helmut Schlichtherle, Soultana Maria Valamoti
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0162328

Population Genetic Structure of Aedes fluviatilis (Diptera: Culicidae)
Cited by: 20
Author(s): Laura Cristina Multini, André Barretto Bruno Wilke, Lincoln Suesdek, Mauro Toledo Marrelli
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0221770

The Pacific harbor seal gut microbiota in Mexico: Its relationship with diet and functional inferences
Cited by: 22
Author(s): Arlette Pacheco-Sandoval, Yolanda Schramm, Gisela Heckel, Elizabeth Brassea-Pérez, Marcel Martínez‐Porchas, Asunción Lago‐Lestón
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0255630

Sexing white 2D footprints using convolutional neural networks
Cited by: 3
Author(s): Marcin Budka, Matthew R. Bennett, Sally C. Reynolds, Shelby Barefoot, Sarah Reel, Selina Reidy, Jeremy Walker
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0141651

Carnivory during Ontogeny of the Plagioscion squamosissimus: A Successful Non-Native Fish in a Lentic Environment of the Upper Paraná River Basin
Cited by: 18
Author(s): Mayara Pereira Neves, Rosilene Luciana Delariva, Ana Tereza Bittencourt Guimarães, Paulo Vanderlei Sanches
Software Mentions: 2
Published: almost 11 years ago

10.3389/fmicb.2019.00983

Characterization of the Castanopsis carlesii Deadwood Mycobiome by Pacbio Sequencing of the Full-Length Fungal Nuclear Ribosomal Internal Transcribed Spacer (ITS)
Cited by: 17
Author(s): Witoon Purahong, Ausana Mapook, Yuting Wu, Chaur-Tzuhn Chen
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0046984

The Success of Acinetobacter Species; Genetic, Metabolic and Virulence Attributes
Cited by: 159
Author(s): Anton Y. Peleg, Anna de Breij, Mark D. Adams, Gustavo M. Cerqueira, Stefano Mocali, Marco Galardini, Peter H. Nibbering, Ashlee M. Earl, Doyle V. Ward, David L. Paterson, Harald Seifert, Lenie Dijkshoorn
Software Mentions: 2
Published: almost 14 years ago

10.3389/fmicb.2015.00379

Cropping systems modulate the rate and magnitude of soil microbial autotrophic CO2 fixation in soil
Cited by: 39
Author(s): Xin Wu, Tida Ge, Wei Wang, Yuan Huang, Carl‐Eric Wegner, Zhenke Zhu, Andrew S. Whiteley, Jinshui Wu
Software Mentions: 2
Published: over 11 years ago

10.3897/zookeys.932.50602

Integrative taxonomy of the rock-dwelling gecko Cnemaspis siamensis complex (Squamata, Gekkonidae) reveals a new species from Nakhon Si Thammarat Province, southern Thailand
Cited by: 3
Author(s): Natee Ampai, Perry L. Wood, Bryan L. Stuart, Anchalee Aowphol
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2016.01782

Distinct Factors Shape Aquatic and Sedimentary Microbial Community Structures in the Lakes of Western China
Cited by: 47
Author(s): Jian Yang, Hongchen Jiang, Geng Wu, Wen Li, Guojing Zhang
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0245698

Acetone application for administration of bioactive substances has no negative effects on longevity, fitness, and sexual communication in a parasitic wasp
Cited by: 8
Author(s): Anne-Sophie Jatsch, Joachim Rüther
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0077527

Availability of Ectomycorrhizal Fungi to Black Spruce above the Present Treeline in Eastern Labrador
Cited by: 19
Author(s): Laura Reithmeier, Gavin Kernaghan
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0230952

Using Maize δ15N values to assess soil fertility in fifteenth- and sixteenth-century ad Iroquoian agricultural fields
Cited by: 10
Author(s): John P. Hart, Robert S. Feranec
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0193837

Zoonotic Babesia microti in the northeastern U.S.: Evidence for the expansion of a specific parasite lineage
Cited by: 28
Author(s): Heidi K. Goethert, Philip J. Molloy, Victor P. Berardi, Karen E. Weeks, Sam R. Telford
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0131607

Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals
Cited by: 46
Author(s): Yukuto Sato, Junya Yamagishi, Riu Yamashita, Natsuko O. Shinozaki, Bin Yue, Takuji Yamada, Masayuki Yamamoto, Masao Nagasaki, Akito Tsuboi
Software Mentions: 2
Published: over 11 years ago

10.1002/ece3.1962

Dispersal, niche, and isolation processes jointly explain species turnover patterns of nonvolant small mammals in a large mountainous region of China
Cited by: 12
Author(s): Zhixin Wen, Quan Qing, Yuanbao Du, Lin Xia, Deyan Ge, Qisen Yang
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pcbi.0020006

Seriation in Paleontological Data Using Markov Chain Monte Carlo Methods
Cited by: 53
Author(s): Kai Puolamäki, Mikael Fortelius, Heikki Mannila
Software Mentions: 2
Published: over 20 years ago

10.1371/journal.pcbi.1008843

Computational modelling of muscle fibre operating ranges in the hindlimb of a small ground bird (Eudromia elegans), with implications for modelling locomotion in extinct species
Cited by: 20
Author(s): Peter J. Bishop, Krijn B. Michel, Antoine Falisse, Andrew R. Cuff, Vivian Allen, Friedl De Groote, John R. Hutchinson
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-53346-4

Multi-technique comparison of atherogenic and MCD NASH models highlights changes in sphingolipid metabolism
Cited by: 29
Author(s): Sophie A. Montandon, Emmanuel Somm, Ursula Loizides‐Mangold, Claudio De Vito, Charna Dibner, François R. Jornayvaz
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-53073-w

Microbial changes in relation to oral mucositis in autologous hematopoietic stem cell transplantation recipients
Cited by: 31
Author(s): Alexa M. G. A. Laheij, Judith E. Raber-Durlacher, Renée G. A. Koppelmans, Marie-Charlotte D.N.J.M. Huysmans, Carin Potting, Stephanie J. M. van Leeuwen, Mette D. Hazenberg, Michael T. Brennan, Inger von Bültzingslöwen, Jan‐Erik Johansson, J.J. de Soet, Thijs M. Haverman, Mark J. Buijs, Bernd W. Brandt, F.R. Rozema, Nicole M. A. Blijlevens, Egija Zaura
Software Mentions: 2
Published: almost 7 years ago

10.3389/fvets.2020.00115

Effects of Tilmicosin Treatment on the Nasopharyngeal Microbiota of Feedlot Cattle With Respiratory Disease During the First Week of Clinical Recovery
Cited by: 7
Author(s): Mohamed Zeineldin, James Lowe, Brian Aldridge
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-53769-z

Wild specimens of sand fly phlebotomine Lutzomyia evansi, vector of leishmaniasis, show high abundance of Methylobacterium and natural carriage of Wolbachia and Cardinium types in the midgut microbiome
Cited by: 16
Author(s): Rafael José Vivero, Marcela Villegas-Plazas, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera, Sandra Uribe, Howard Junca
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-53036-1

Brazilian montane rainforest expansion induced by Heinrich Stadial 1 event
Cited by: 11
Author(s): Jorge Luiz Diaz Pinaya, Francisco W. Cruz, Gregório Cardoso Tápias Ceccantini, Pedro Luiz Pizzigatti Corrêa, Nigel C. A. Pitman, Felipe Vemado, Maria del C. Armen S. Lopez, Augusto José Pereira Filho, Carlos Henrique Grohmann, Cristiano Mazur Chiessi, Nicolás Misailidis Stríkis, Ingrid Horák‐Terra, Walter Hugo Lopez Pinaya, Vanda Brito de Medeiros, Rudney de Almeida Santos, Thomas Kenji Akabane, Maicon A. Silva, Rachid Cheddadi, Mark B. Bush, Alexandra‐Jane Henrot, Louis François, Alain Hambuckers, Frédéric Boyer, Matthieu Carré, Éric Coissac, Gentile Francesco Ficetola, Kangyou Huang, Anne-Marie Lézine, Majda Nourelbait, Ali Rhoujjati, Pierre Taberlet, Fausto O. Sarmiento, Daniel Abel Schaad, Francisca Alba‐Sánchez, Zhuo Zheng, Paulo Eduardo de Oliveira
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-021-98680-8

Soil microbiota and microarthropod communities in oil contaminated sites in the European Subarctic
Cited by: 8
Author(s): Elena N. Melekhina, Elena S. Belykh, М. Ю. Маркарова, А. А. Таскаева, Е. Е. Расова, О. А. Батурина, Мarsel R. Kabilov, Ilya O. Velegzhaninov
Software Mentions: 2
Published: about 5 years ago

10.3389/fvets.2019.00354

Respiratory Dysbiosis in Canine Bacterial Pneumonia: Standard Culture vs. Microbiome Sequencing
Cited by: 14
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-019-55719-1

The first global deep-sea stable isotope assessment reveals the unique trophic ecology of Vampire Squid Vampyroteuthis infernalis (Cephalopoda)
Cited by: 19
Author(s): Alexey V. Golikov, Filipe R. Ceia, Rushan M. Sabirov, Jonathan D. Ablett, Ian G. Gleadall, Guðmundur A. Guðmundsson, Henk-Jan T. Hoving, Heather Judkins
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-55270-z

Phylogeographic patterns of intertidal arthropods (Acari, Oribatida) from southern Japanese islands reflect paleoclimatic events
Cited by: 8
Author(s): Tobias Pfingstl, Maximilian Wagner, Shimpei F. Hiruta, Stephan Koblmüller, Wataru Hagino, Satoshi Shimano
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-56269-2

Distribution, Interaction and Functional Profiles of Epiphytic Bacterial Communities from the Rocky Intertidal Seaweeds, South Africa
Cited by: 53
Author(s): Ramganesh Selvarajan, Timothy Sibanda, S. Venkatachalam, Henry Joseph Oduor Ogola, Chinedu Christopher Obieze, Titus A.M. Msagati
Software Mentions: 2
Published: almost 7 years ago

10.3389/fnut.2021.590978

Mainstreaming Local Food Species for Nutritional and Livelihood Security: Insights From Traditional Food Systems of Adi Community of Arunachal Pradesh, India
Cited by: 3
Author(s): Ranjay K. Singh, Rakesh Bhardwaj, Anamika Singh, Temin Payum, Kumar Arvind, Anshuman Singh, L. Wangchu, Sanjay Kumar Upadhyay
Software Mentions: 2
Published: about 5 years ago

10.3389/fpls.2014.00806

Genetic diversity in aspen and its relation to arthropod abundance
Cited by: 6
Author(s): Chunxia Zhang, Barbara Vornam, Katharina Volmer, Kathleen Prinz, Frauke Kleemann, Lars Köhler, Andrea Polle, Reiner Finkeldey
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-020-59004-4

Genome-wide and SNP network analyses reveal genetic control of spikelet sterility and yield-related traits in wheat
Cited by: 23
Author(s): Ahmad M. Alqudah, Jemanesh K. Haile, Dalia Z. Alomari, Curtis Pozniak, Borislav Kobiljski, Andreas Börner
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2015.00636

Host and non-host roots in rice: cellular and molecular approaches reveal differential responses to arbuscular mycorrhizal fungi
Cited by: 67
Author(s): Valentina Fiorilli, Marta Vallino, Chiara Biselli, Antonella Faccio, Paolo Bagnaresi, Paola Bonfante
Software Mentions: 2
Published: about 11 years ago

10.3389/fmicb.2016.00536

Investigation of the Activity of the Microorganisms in a Reblochon-Style Cheese by Metatranscriptomic Analysis
Cited by: 46
Author(s): Christophe Monnet, Éric Dugat-Bony, Dominique Swennen, Jean-Marie Beckerich, Françoise Irlinger, Sébastien Fraud, Pascal Bonnarme
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-020-62499-6

Milk microbial composition of Brazilian dairy cows entering the dry period and genomic comparison between Staphylococcus aureus strains susceptible to the bacteriophage vB_SauM-UFV_DC4
Cited by: 3
Author(s): Vinícius da Silva Duarte, Laura Treu, Cristina Sartori, Roberto Sousa Dias, Isabela da Silva Paes, Marcella Silva Vieira, Gabriele Rocha Santana, Marcos Inácio Marcondes, Alessio Giacomini, Viviana Corich, Stefano Campanaro, Cynthia Cânedo da Silva, Sérgio Oliveira de Paula
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2015.00490

Characterization of culturable bacterial endophytes and their capacity to promote plant growth from plants grown using organic or conventional practices
Cited by: 101
Author(s): Ye Xia, Seth DeBolt, Jean-Luc Dreyer, Delia Scott, Mark A. Williams
Software Mentions: 2
Published: over 11 years ago

10.3390/genes10100827

Comparative Study of Gut Microbiota in Wild and Captive Giant Pandas (Ailuropoda melanoleuca)
Cited by: 54
Author(s): Wei Guo, Saurabh Mishra, Chengdong Wang, Hemin Zhang, Ruihong Ning, Fanli Kong, Bo Zeng, Jiangchao Zhao, Ying Liu
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2021.642125

Comparative Genomics of Emerging Lineages and Mobile Resistomes of Contemporary Broiler Strains of Salmonella Infantis and E. coli
Cited by: 6
Author(s): Ama Szmolka, Haleluya Wami, Ulrich Dobrindt
Software Mentions: 2
Published: over 5 years ago

10.3389/fpls.2016.01619

Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production
Cited by: 34
Author(s): José L. Rambla, Almudena Trapero-Mozos, Gianfranco Diretto, Ángela Rubio-Moraga, Antonio Granell, Lourdes Gómez-Gómez, Oussama Ahrazem
Software Mentions: 2
Published: about 10 years ago

10.1038/s41598-020-66638-x

Successional trajectory of bacterial communities in soil are shaped by plant-driven changes during secondary succession
Cited by: 24
Author(s): M. Rama Krishna, Shruti Gupta, Manuel Delgado‐Baquerizo, Elly Morriën, Satish Chandra Garkoti, Rupesh Chaturvedi, Shandar Ahmad
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2017.00608

Inbred Mouse Populations Exhibit Intergenerational Changes in Intestinal Microbiota Composition and Function Following Introduction to a Facility
Cited by: 16
Author(s): Jocelyn M. Choo, Paul J. Trim, Lex E. X. Leong, Guy C. J. Abell, Carly Brune, Nicole Jeffries, Steven Wesselingh, T. Neil Dear, Marten F. Snel, Geraint B. Rogers
Software Mentions: 2
Published: over 9 years ago

10.3390/genes12040535

Metagenomics Assessment of Soil Fertilization on the Chemotaxis and Disease Suppressive Genes Abundance in the Maize Rhizosphere
Cited by: 6
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 5 years ago

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