bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1016/j.dib.2019.103858

Palynological and X-ray fluorescence (XRF) data of Carnian (Late Triassic) formations from western Hungary
Cited by: 4
Author(s): Viktória Baranyi, Ágnes Rostási, Béla Raucsik, Wolfram M. Kürschner
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-019-40551-4

Consistent bacterial selection by date palm root system across heterogeneous desert oasis agroecosystems
Cited by: 27
Author(s): María J. Mosqueira, Ramona Marasco, Marco Fusi, Grégoire Michoud, Giuseppe Merlino, Ameur Chérif, Daniele Daffonchio
Software Mentions: 2
Published: over 7 years ago

10.1016/j.dendro.2019.05.003

Multidecadal variability in Atlas cedar growth in Northwest Africa during the last 850 years: Implications for dieback and conservation of an endangered species
Cited by: 6
Author(s): Kelsey Copes‐Gerbitz, William J. Fletcher, Jonathan G. A. Lageard, Mustapha Rhanem, Sandy P. Harrison
Software Mentions: 2
Published: about 7 years ago

10.3390/microorganisms7110518

Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem
Cited by: 11
Author(s): Despoina Vokou, Savvas Genitsaris, Katerina Karamanoli, Katerina Vareli, Marina Zachari, Despoina Voggoli, Nikolaos Monokrousos, John M. Halley, Ioannis Sainis
Software Mentions: 2
Published: almost 7 years ago

10.1002/ece3.4622

Birds in the Himalayas: What drives beta diversity patterns along an elevational gradient?
Cited by: 25
Author(s): Yiming Hu, Zhifeng Ding, Zhigang Jiang, Quan Qing, Keji Guo, Liqiao Tian, Huijian Hu, Luke Gibson
Software Mentions: 2
Published: almost 8 years ago

10.1002/mbo3.584

Microbial dynamics during harmful dinoflagellateOstreopsiscf.ovatagrowth: Bacterial succession and viral abundance pattern
Cited by: 14
Author(s): Flavio Guidi, Laura Pezzolesi, Silvana Vanucci
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0185187

Photosynthetic epibionts and endobionts of Pacific oyster shells from oyster reefs in rocky versus mudflat shores
Cited by: 16
Author(s): Laurent Barillé, Anthony Le Bris, Vona Méléder, Patrick Launeau, Marc Robin, Ioanna Louvrou, Lourenço Ribeiro
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0193837

Zoonotic Babesia microti in the northeastern U.S.: Evidence for the expansion of a specific parasite lineage
Cited by: 28
Author(s): Heidi K. Goethert, Philip J. Molloy, Victor P. Berardi, Karen E. Weeks, Sam R. Telford
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0117562

Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities
Cited by: 170
Author(s): Dominique A. Cowart, Miguel Pinheiro, Olivier Mouchel, Marion Maguer, Jacques Grall, Jacques Miné, Sophie Arnaud–Haond
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-019-43478-y

Dynamics of archaeal community in soil with application of composted tannery sludge
Cited by: 14
Author(s): Ana Roberta Lima Miranda, Lucas William Mendes, Leandro Nascimento Lemos, Jadson Emanuel Lopes Antunes, Marineide Rodrigues do Amorim, Vânia Maria Maciel Melo, Wanderley José de Melo, Paul J. Van den Brink, Ademir Sérgio Ferreira de Araújo
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.4117

Changes of arthropod diversity across an altitudinal ecoregional zonation in Northwestern Argentina
Cited by: 11
Author(s): Andrea Ximena González-Reyes, José Antonio Corronca, Sandra M. Rodriguez-Artigas
Software Mentions: 2
Published: almost 9 years ago

10.1002/ece3.3899

What determines prey selection in owls? Roles of prey traits, prey class, environmental variables, and taxonomic specialization
Cited by: 19
Author(s): Orr Comay, Tamar Dayan
Software Mentions: 2
Published: over 8 years ago

10.3390/microorganisms8040581

Effect of Inoculum Pretreatment on the Composition of Microbial Communities in Anaerobic Digesters Producing Volatile Fatty Acids
Cited by: 26
Author(s): Lucía Blasco, Minna Kahala, Elina Tampio, Markku Vainio, Satu Ervasti, Saija Rasi
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-45279-9

Changes in human mandibular shape during the Terminal Pleistocene-Holocene Levant
Cited by: 12
Author(s): Ariel Pokhojaev, Hadas Leah Avni, Tatiana Sella Tunis, Rachel Sarig, Hila May
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-019-46047-5

Anthropogenic pollutant-driven geographical distribution of mesozooplankton communities in estuarine areas of the Bohai Sea, China
Cited by: 16
Author(s): Yangchun Gao, Qing Yang, Hongjun Li, Xiaocheng Wang, Aibin Zhan
Software Mentions: 2
Published: over 7 years ago

10.1002/ece3.1962

Dispersal, niche, and isolation processes jointly explain species turnover patterns of nonvolant small mammals in a large mountainous region of China
Cited by: 12
Author(s): Zhixin Wen, Quan Qing, Yuanbao Du, Lin Xia, Deyan Ge, Qisen Yang
Software Mentions: 2
Published: almost 11 years ago

10.1002/ece3.1501

Elevation as a barrier: genetic structure for an<scp>A</scp>tlantic rain forest tree (<scp>B</scp>athysa australis) in the<scp>S</scp>erra do<scp>M</scp>ar mountain range,<scp>SE</scp>Brazil
Cited by: 16
Author(s): Talita Soares Reis, Maísa Ciampi-Guillardi, Miklos Maximiliano Bajay, Anete Pereira de Souza, Flávio Antonio Maës dos Santos
Software Mentions: 2
Published: over 11 years ago

10.1016/j.scitotenv.2018.08.101

Reducing water use by alternate-furrow irrigation with livestock wastewater reduces antibiotic resistance gene abundance in the rhizosphere but not in the non-rhizosphere
Cited by: 16
Author(s): Yuan Liu, Erping Cui, Andrew L. Neal, Xiaoxian Zhang, Zhongyang Li, Yatao Xiao, Zhenggang Du, Feng Gao, Xiucai Fan, Chao Hu
Software Mentions: 2
Published: almost 8 years ago

10.1002/ece3.562

Parallel and non-parallel morphological divergence among foraging specialists in European whitefish (Coregonus lavaretus)
Cited by: 47
Author(s): Anna Siwertsson, Rune Knudsen, Colin E. Adams, Kim Præbel, Per‐Arne Amundsen
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0180371

Shifts in the bacterial community composition along deep soil profiles in monospecific and mixed stands of Eucalyptus grandis and Acacia mangium
Cited by: 60
Author(s): Arthur Prudêncio de Araújo Pereira, Pedro Avelino Maia de Andrade, Daniel Bini, Ademir Durrer, Agnès Robin, J. P. Bouillet, Fernando Dini Andreote, Elke Jurandy Bran Nogueira Cardoso
Software Mentions: 2
Published: over 9 years ago

10.3390/s21020329

BLE-Based Indoor Tracking System with Overlapping-Resistant IoT Solution for Tourism Applications
Cited by: 10
Author(s): Radosław Belka, Stanisław Deniziak, Grzegorz Łukawski, Paweł Pięta
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0195643

A snapshot of gut microbiota of an adult urban population from Western region of India
Cited by: 39
Author(s): Disha Tandon, Mohammed Monzoorul Haque, R Saravanan, Shafiq Shaikh, Pradeep Ram Angia Sriram, Ashok Kumar Dubey, Sharmila S. Mande
Software Mentions: 2
Published: over 8 years ago

10.3390/s21155113

Relation-Based Deep Attention Network with Hybrid Memory for One-Shot Person Re-Identification
Cited by: 4
Author(s): Runxuan Si, Jing Zhao, Yuhua Tang, Shaowu Yang
Software Mentions: 2
Published: over 5 years ago

10.1186/2193-1801-3-391

Different pioneer plant species select specific rhizosphere bacterial communities in a high mountain environment
Cited by: 32
Author(s): Sonia Ciccazzo, Alfonso Esposito, Eleonora Rolli, Stefan Zerbe, Daniele Daffonchio, Lorenzo Brusetti
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pone.0120645

Genetic Structure Is Associated with Phenotypic Divergence in Floral Traits and Reproductive Investment in a High-Altitude Orchid from the Iron Quadrangle, Southeastern Brazil
Cited by: 14
Author(s): Bruno Leles, Anderson V. Chaves, Philip L. Russo, João A. N. Batista, Maria Bernadete Lovato
Software Mentions: 2
Published: over 11 years ago

10.3390/microorganisms9081657

Oral Microbiota Identifies Patients in Early Onset Rheumatoid Arthritis
Cited by: 20
Author(s): Anders Esberg, Linda Johansson, Ingegerd Johansson, Solbritt Rantapää-Dahlqvist
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.4998

High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary
Cited by: 9
Author(s): Angelina Nunziata, Laura Benedetti, Ilaria Marchioni, C. Cervelli
Software Mentions: 2
Published: over 7 years ago

10.1007/s13199-014-0291-1

The diversity of endophytic fungi in the above-ground tissue of two Lycopodium species in Poland
Cited by: 23
Author(s): Julia Pawłowska, Mateusz Wilk, Anna Śliwińska–Wyrzychowska, Monika Mętrak, Marta Wrzosek
Software Mentions: 2
Published: over 12 years ago

10.1002/ece3.6631

DNA barcode assessment and population structure of aphidophagous hoverfly Sphaerophoria scripta: Implications for conservation biological control
Cited by: 4
Author(s): Nemanja Gojković, Ljubinka Francuski, Jasmina Ludoški, Vesna Milankov
Software Mentions: 2
Published: about 6 years ago

10.1007/s00122-017-2882-8

Discovery and characterization of two new stem rust resistance genes in Aegilops sharonensis
Cited by: 24
Author(s): Guotai Yu, Nicolas Champouret, Burkhard Steuernagel, Pablo D. Olivera, Jamie Simmons, Cole Williams, Ryan C. Johnson, Matthew J. Moscou, Inmaculada Hernández-Pinzón, Phon Green, Hanan Sela, E. Millet, Jonathan D. G. Jones, Eric Ward, Brian J. Steffenson, Brande B. H. Wulff
Software Mentions: 2
Published: over 9 years ago

10.7717/peerj.10184

Comparative analysis of the metabolically active microbial communities in the rumen of dromedary camels under different feeding systems using total rRNA sequencing
Cited by: 11
Author(s): Alaa Emara Rabee, Robert J. Forster, Chijioke O. Elekwachi, Ebrahim A. Sabra, Mebarek Lamara
Software Mentions: 2
Published: almost 6 years ago

10.3390/toxics9050093

Total and Metabolically Active Microbial Community of Aerobic Granular Sludge Systems Operated in Sequential Batch Reactors: Effect of Pharmaceutical Compounds
Cited by: 7
Author(s): Barbara Muñoz-Palazón, Aurora Rosa-Masegosa, Miguel Hurtado-Martinez, Alejandro Rodríguez-Sánchez, Alexander Link, Ramiro Vílchez-Vargas, Alejandro González‐Martínez, José Manuel López López
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.2714

Does thinning-induced gap size result in altered soil microbial community in pine plantation in eastern Tibetan Plateau?
Cited by: 31
Author(s): Bing Yang, Xiaoyun Pang, Bin Hu, Weikai Bao, Guangming Tian
Software Mentions: 2
Published: over 9 years ago

10.1186/1745-6215-14-384

Adolescent depressive disorders and family based interventions in the family options multicenter evaluation: study protocol for a randomized controlled trial
Cited by: 11
Author(s): Andrew J. Lewis, Melanie D. Bertino, Joanna Skewes, Lyndel Shand, Nina Borojevic, Tess Knight, Dan I. Lubman, John W. Toumbourou
Software Mentions: 2
Published: almost 14 years ago

10.1371/journal.pone.0212769

Genome and secretome of Chondrostereum purpureum correspond to saprotrophic and phytopathogenic life styles
Cited by: 11
Author(s): Rocío Reina, Harald Kellner, Jaqueline Hess, Nico Jehmlich, Inmaculada García-Romera, Elisabet Aranda, Martin Hofrichter, Christiane Liers
Software Mentions: 2
Published: over 7 years ago

10.1002/ece3.7416

Changes in the Montagu’s Harrier Circus pygargus diet in Eastern Poland across decades promote insects and reptilians, but not birds and rodents
Cited by: 2
Author(s): Ignacy Kitowski, Dariusz Jakubas, Paweł Mirski, Grzegorz Pitucha, Kornelia Markowska
Software Mentions: 2
Published: over 5 years ago

10.1128/mSphere.00208-21

Cyanophage Diversity and Community Structure in Dead Zone Sediments
Cited by: 8
Author(s): Elias Broman, Karin Holmfeldt, Stefano Bonaglia, Per Hall, Francisco J. A. Nascimento
Software Mentions: 2
Published: over 5 years ago

10.1128/mSystems.01249-20

Insights into the Cultured Bacterial Fraction of Corals
Cited by: 40
Author(s): Michael Sweet, Helena Villela, Tina Keller‐Costa, Rodrigo Costa, Stefano Romano, David G. Bourne, Anny Cárdenas, Megan J. Huggett, Allison H. Kerwin, Felicity Kuek, Mónica Medina, Julie Meyer, Moritz Müller, F. Joseph Pollock, Michael S. Rappé, Mathieu G. Séré, Koty Sharp, Christian R. Voolstra, Nathan J Zaccardi, Maren Ziegler, Raquel S. Peixoto
Software Mentions: 2
Published: over 5 years ago

10.1038/ismej.2013.223

Longitudinal study of murine microbiota activity and interactions with the host during acute inflammation and recovery
Cited by: 147
Author(s): Clarissa Schwab, David Berry, Isabella Rauch, Ina Maria Rennisch, Julia Ramesmayer, Eva Hainzl, Susanne Heider, Thomas Decker, Lukas Kenner, Mathias Müller, Birgit Strobl, Michael Wagner, Christa Schleper, Alexander Loy, Tim Urich
Software Mentions: 2
Published: almost 13 years ago

10.1038/ismej.2016.153

Helminth burden and ecological factors associated with alterations in wild host gastrointestinal microbiota
Cited by: 29
Author(s): Lindsay K. Newbold, Sarah J. Burthe, Anna Oliver, Hyun S. Gweon, Christopher J. Barnes, Francis Daunt, Christopher J. van der Gast
Software Mentions: 2
Published: almost 10 years ago

10.7717/peerj.4195

Effect of dark sweet cherry powder consumption on the gut microbiota, short-chain fatty acids, and biomarkers of gut health in obese db/db mice
Cited by: 38
Author(s): José F. García-Mazcorro, Nara Nunes Lage, Susanne U. Mertens‐Talcott, Stephen T. Talcott, Boon P. Chew, Scot E. Dowd, Jorge R. Kawas, Giuliana Noratto
Software Mentions: 2
Published: almost 9 years ago

10.1111/jfb.14054

Impacts of acidification on brown troutSalmo truttapopulations and the contribution of stocking to population recovery and genetic diversity
Cited by: 9
Author(s): Paulo A. Prodöhl, A. Ferguson, Caroline Bradley, Robin Ade, Colin Roberts, E. J. Keay, Artur R. Costa, Rosaleen Hynes
Software Mentions: 2
Published: over 7 years ago

10.1002/ece3.6762

Genetic diversity, population structure, and gene flow analysis of lowland bamboo [Oxytenanthera abyssinica (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: about 6 years ago

10.3390/jfb12020031

Functionalization with a Polyphenol-Rich Pomace Extract Empowers a Ceramic Bone Filler with In Vitro Antioxidant, Anti-Inflammatory, and Pro-Osteogenic Properties
Cited by: 3
Author(s): Giorgio Iviglia, Elisa Torre, Clara Cassinelli, Marco Morra
Software Mentions: 2
Published: over 5 years ago

10.3390/jof6030150

The Relationship between Fungal Diversity and Invasibility of a Foliar Niche—The Case of Ash Dieback
Cited by: 17
Author(s): Ahto Agan, Rein Drenkhan, Kalev Adamson, Leho Tedersoo, Halvor Solheim, Isabella Børja, Iryna Matsiakh, Volkmar Timmermann, Nina Elisabeth Nagy, Ari M. Hietala
Software Mentions: 2
Published: about 6 years ago

10.3390/jof7030210

The Abundance and Diversity of Fungi in a Hypersaline Microbial Mat from Guerrero Negro, Baja California, México
Cited by: 9
Author(s): Paula Maza-Márquez, Michael D. Lee, Brad M. Bebout
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0080825

Variable Effects of Dispersal on Productivity of Bacterial Communities Due to Changes in Functional Trait Composition
Cited by: 19
Author(s): Ina Severin, Örjan Östman, Eva S. Lindström
Software Mentions: 2
Published: almost 13 years ago

10.3389/fmicb.2019.01209

Effect of Re-acidification on Buffalo Grass Rhizosphere and Bulk Microbial Communities During Phytostabilization of Metalliferous Mine Tailings
Cited by: 23
Author(s): Linnea K. Honeker, Catherine F. Gullo, Julia W. Neilson, Jon Chorover, Raina M. Maier
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.00214

Characterization of Asymptomatic Bacteriuria Escherichia coli Isolates in Search of Alternative Strains for Efficient Bacterial Interference against Uropathogens
Cited by: 21
Author(s): Christoph Stork, Beáta Kovács, Barnabás Rózsai, Johannes Putze, Matthias Kiel, Ágnes Dorn, Judit Kovács, Szilvia Melegh, Andreas Leimbach, Tamás Kovács, G. Schneider, Mónika Kerényi, Levente Emődy, Ulrich Dobrindt
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0230952

Using Maize δ15N values to assess soil fertility in fifteenth- and sixteenth-century ad Iroquoian agricultural fields
Cited by: 10
Author(s): John P. Hart, Robert S. Feranec
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2148-9-234

Inferring speciation modes in a clade of Iberian chafers from rates of morphological evolution in different character systems
Cited by: 10
Author(s): Dirk Ahrens, Ignacio Ribera
Software Mentions: 2
Published: almost 18 years ago

10.1371/journal.pone.0239906

Pattern of forest recovery and carbon stock following shifting cultivation in Manipur, North-East India
Cited by: 16
Author(s): Pentile Thong, Uttam Kumar Sahoo, Uttam Thangjam, Rocky Pebam
Software Mentions: 2
Published: about 6 years ago

10.1155/2015/242856

Diverse Reductive Dehalogenases Are Associated with Clostridiales-Enriched Microcosms Dechlorinating 1,2-Dichloroethane
Cited by: 12
Author(s): Giuseppe Merlino, Annalisa Balloi, Massimo Marzorati, Francesca Mapelli, Aurora Rizzi, D. Lavazza, Francesca de Ferra, Giovanna Carpani, Daniele Daffonchio
Software Mentions: 2
Published: almost 12 years ago

10.1155/2017/4969076

Effect of Dietary Chestnut or Quebracho Tannin Supplementation on Microbial Community and Fatty Acid Profile in the Rumen of Dairy Ewes
Cited by: 18
Author(s): Arianna Buccioni, Grazia Pallara, Roberta Pastorelli, Letizia Bellini, Alice Cappucci, Federica Mannelli, Sara Minieri, Valentina Roscini, Stefano Rapaccini, Marcello Mele, Luciana Giovannetti, Carlo Viti, Mariano Pauselli
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12862-015-0392-3

Semi-permeable species boundaries in Iberian barbels (Barbus and Luciobarbus, Cyprinidae)
Cited by: 22
Author(s): Hugo F. Gante, Ignacio Doadrio, Maria Judite Alves, Thomas E. Dowling
Software Mentions: 2
Published: over 11 years ago

10.1186/s13068-020-01679-y

New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters
Cited by: 117
Author(s): Stefano Campanaro, Laura Treu, Luis M. Rodriguez-R, Adam Kovalovszki, Ryan M. Ziels, Irena Maus, Xinyu Zhu, Panagiotis Kougias, Arianna Basile, Gang Luo, Andreas Schlüter, Konstantinos T. Konstantinidis, Irini Angelidaki
Software Mentions: 2
Published: over 6 years ago

10.3390/biology10070587

Combined Effect of Laboratory-Simulated Fire and Chromium Pollution on Microbial Communities in an Agricultural Soil
Cited by: 5
Author(s): Ida Rascio, Maddalena Curci, Concetta Eliana Gattullo, Anna Lavecchia, Mohammad Yaghoubi Khanghahi, Roberto Terzano, Carmine Crecchio
Software Mentions: 2
Published: over 5 years ago

10.3390/biology10070569

Identifying Hidden Viable Bacterial Taxa in Tropical Forest Soils Using Amplicon Sequencing of Enrichment Cultures
Cited by: 5
Author(s): Chakriya Sansupa, Sara Fareed Mohamed Wahdan, Terd Disayathanoowat, Witoon Purahong
Software Mentions: 2
Published: over 5 years ago

10.3390/antiox10091426

Gut Microbiota Has a Crucial Role in the Development of Hypertension and Vascular Dysfunction in Toll-like Receptor 7-Driven Lupus Autoimmunity
Cited by: 6
Author(s): Néstor de la Visitación, Iñaki Robles-Vera, Javier Moleón, Cristina González-Correa, Nazaret Aguilera-Sánchez, Marta Toral, Manuel Gómez-Guzmán, Manuel Sánchez, Rosario Jiménez, Natividad Martín‐Morales, Francisco O’Valle, Miguel Romero, Juan Duarte
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0033819

A 3-Year Study Reveals That Plant Growth Stage, Season and Field Site Affect Soil Fungal Communities while Cultivar and GM-Trait Have Minor Effects
Cited by: 57
Author(s): S. Emilia Hannula, Wietse de Boer, Johannes van Veen
Software Mentions: 2
Published: over 14 years ago

10.1186/s12862-019-1449-5

Genetic, phenotypic and ecological differentiation suggests incipient speciation in two Charadrius plovers along the Chinese coast
Cited by: 25
Author(s): Xuejing Wang, Pinjia Que, Gerald Heckel, Junhua Hu, Xuecong Zhang, Chung Yu Chiang, Nan Zhang, Qin Huang, Simin Liu, Jonathan Martinez, Emilio Pagani‐Núñez, Caroline Dingle, Yu Yan Leung, Tamás Székely, Zhengwang Zhang, Yang Liu
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0131607

Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals
Cited by: 46
Author(s): Yukuto Sato, Junya Yamagishi, Riu Yamashita, Natsuko O. Shinozaki, Bin Yue, Takuji Yamada, Masayuki Yamamoto, Masao Nagasaki, Akito Tsuboi
Software Mentions: 2
Published: over 11 years ago

10.3390/ani11061825

Metagenomic Analysis of the Fecal Archaeome in Suckling Piglets Following Perinatal Tulathromycin Metaphylaxis
Cited by: 3
Author(s): Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brian Aldridge, James Lowe
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0229827

Do ecological characteristics drive the prevalence of Panulirus argus virus 1 (PaV1) in juvenile Caribbean spiny lobsters in a tropical reef lagoon?
Cited by: 5
Author(s): Charlotte E. Davies, Patricia Briones‐Fourzán, Cecilia Barradas-Ortíz, Fernando Negrete-Soto, Gema Moo-Cocom, Enrique Lozano‐Álvarez
Software Mentions: 2
Published: over 6 years ago

10.1093/aobpla/plab035

Functional traits predict resident plant response to Reynoutria japonica invasion in riparian and fallow communities in southern Poland
Cited by: 3
Author(s): Marcin W. Woch, Paweł Kapusta, Małgorzata Stanek, Szymon Zubek, Anna M. Stefanowicz
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0046984

The Success of Acinetobacter Species; Genetic, Metabolic and Virulence Attributes
Cited by: 159
Author(s): Anton Y. Peleg, Anna de Breij, Mark D. Adams, Gustavo M. Cerqueira, Stefano Mocali, Marco Galardini, Peter H. Nibbering, Ashlee M. Earl, Doyle V. Ward, David L. Paterson, Harald Seifert, Lenie Dijkshoorn
Software Mentions: 2
Published: almost 14 years ago

10.1371/journal.pone.0096605

Changes in the Bacterial Community of Soil from a Neutral Mine Drainage Channel
Cited by: 70
Author(s): Letícia Bianca Pereira, Renato Vicentini, Laura Maria Mariscal Ottoboni
Software Mentions: 2
Published: over 12 years ago

10.1093/molbev/msaa137

Collagen Sequence Analysis Reveals Evolutionary History of Extinct West Indies Nesophontes (Island-Shrews)
Cited by: 12
Author(s): Michael Buckley, Virginia L. Harvey, Johanset Orihuela, Alexis M. Mychajliw, Joseph N. Keating, Juan N. Almonte Milán, Craig Lawless, Andrew Chamberlain, Victoria M. Egerton, Phillip L. Manning
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pntd.0002960

Dynamics of Sylvatic Chagas Disease Vectors in Coastal Ecuador Is Driven by Changes in Land Cover
Cited by: 23
Author(s): Mario J. Grijalva, D. Teran, Olivier Dangles
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0068429

Invasion Is a Community Affair: Clandestine Followers in the Bacterial Community Associated to Green Algae, Caulerpa racemosa, Track the Invasion Source
Cited by: 58
Author(s): Tânia Aires, Ester A. Serrão, Gary A. Kendrick, Carlos M. Duarte, Sophie Arnaud–Haond
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0255630

Sexing white 2D footprints using convolutional neural networks
Cited by: 3
Author(s): Marcin Budka, Matthew R. Bennett, Sally C. Reynolds, Shelby Barefoot, Sarah Reel, Selina Reidy, Jeremy Walker
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.0020006

Seriation in Paleontological Data Using Markov Chain Monte Carlo Methods
Cited by: 53
Author(s): Kai Puolamäki, Mikael Fortelius, Heikki Mannila
Software Mentions: 2
Published: over 20 years ago

10.1371/journal.pone.0077527

Availability of Ectomycorrhizal Fungi to Black Spruce above the Present Treeline in Eastern Labrador
Cited by: 19
Author(s): Laura Reithmeier, Gavin Kernaghan
Software Mentions: 2
Published: almost 13 years ago

10.1002/ece3.5040

Different responses of avian feeding guilds to spatial and environmental factors across an elevation gradient in the central Himalaya
Cited by: 21
Author(s): Zhifeng Ding, Jiankun Liang, Yiming Hu, Zhixin Zhou, Sun Hongbin, Lina Liu, Haijun Liu, Huijian Hu, Xingfeng Si
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0102934

Regime Shift in Sandy Beach Microbial Communities following Deepwater Horizon Oil Spill Remediation Efforts
Cited by: 23
Author(s): Annette Summers Engel, Axita Ajaykumar Gupta
Software Mentions: 2
Published: over 12 years ago

10.1186/s12898-018-0164-1

Interference competition as a key determinant for spatial distribution of mangrove crabs
Cited by: 19
Author(s): Stefano Cannicci, Marco Fusi, Filippo Cimò, Farid Dahdouh‐Guebas, Sara Fratini
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0053649

Biased Diversity Metrics Revealed by Bacterial 16S Pyrotags Derived from Different Primer Sets
Cited by: 144
Author(s): Chunye Lin, Lin Ye, Amy Tong, Si Lok, Tong Zhang
Software Mentions: 2
Published: almost 14 years ago

10.3389/fgene.2021.676791

Day 7 Embryos Change the Proteomics and Exosomal Micro-RNAs Content of Bovine Uterine Fluid: Involvement of Innate Immune Functions
Cited by: 5
Author(s): Kaoru Kusama, Mohammad Bazlur Rashid, Rasoul Kowsar, Mohamed Ali Marey, Anup Kumar Talukder, Kentaro Nagaoka, M. Shimada, Hasan Khatib, Kazuhiko Imakawa, Akio Miyamoto
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0148130

Spatial Distribution of Fungal Communities in an Arable Soil
Cited by: 55
Author(s): Julia Moll, Björn Hoppe, Stephan König, Tesfaye Wubet, François Buscot, Dirk Krüger
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0234395

Mapping QTLs underpin nutrition components in aromatic rice germplasm
Cited by: 11
Author(s): Mohammad Zahidul Islam, Md. Arifuzzaman, Sarbani Banik, Mahmud Hossain, Jannatul Ferdous, M Khalequzzaman, Barry R. Pittendrigh, Motonori Tomita, M. P. Ali
Software Mentions: 2
Published: over 6 years ago

10.1186/s13072-017-0165-x

Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning
Cited by: 17
Author(s): Gabriel Gutiérrez, Gonzalo Millán-Zambrano, Daniel A. Medina, Antonio Jordán-Pla, Jose E. Pérez-Ortı́n, Xenia Peñate, Sebastián Chávez
Software Mentions: 2
Published: almost 9 years ago

10.3389/fmicb.2019.00171

Modulation of Intestinal Microbiota in Solea senegalensis Fed Low Dietary Level of Ulva ohnoi
Cited by: 24
Author(s): Silvana Tapia‐Paniagua, Milena Fumanal, Victoria Anguís, Catalina Fernández‐Díaz, Francisco Javier Alarcón, Miguel A. Moriñigo, M.C. Balebona
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pcbi.1008843

Computational modelling of muscle fibre operating ranges in the hindlimb of a small ground bird (Eudromia elegans), with implications for modelling locomotion in extinct species
Cited by: 20
Author(s): Peter J. Bishop, Krijn B. Michel, Antoine Falisse, Andrew R. Cuff, Vivian Allen, Friedl De Groote, John R. Hutchinson
Software Mentions: 2
Published: over 5 years ago

10.1186/s12898-018-0214-8

Transition of Ethiopian highland forests to agriculture-dominated landscapes shifts the soil microbial community composition
Cited by: 9
Author(s): Yoseph T. Delelegn, Witoon Purahong, Hans Sandén, Birru Yitaferu, Douglas L. Godbold, Tesfaye Wubet
Software Mentions: 2
Published: almost 8 years ago

10.3390/plants9080985

Distribution and Characterization of Deep Rhodolith Beds off the Campania coast (SW Italy, Mediterranean Sea)
Cited by: 16
Author(s): Francesco Rendina, Sara Kaleb, Annalisa Caragnano, Federica Ferrigno, Luca Appolloni, Luigia Donnarumma, Gìovanni Fulvio Russo, Roberto Sandulli, Valentina Roviello, Annalisa Falace
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pntd.0006739

Bacterial community composition in the salivary glands of triatomines (Hemiptera: Reduviidae)
Cited by: 15
Author(s): Michele S. Lima, Marinella Silva Laport, Elias Seixas Lorosa, José Jurberg, Kátia Regina Netto dos Santos, Mário Alberto Cardoso da Silva Neto, Caio Tavora Coelho da Costa Rachid, Geórgia C. Atella
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0221770

The Pacific harbor seal gut microbiota in Mexico: Its relationship with diet and functional inferences
Cited by: 22
Author(s): Arlette Pacheco-Sandoval, Yolanda Schramm, Gisela Heckel, Elizabeth Brassea-Pérez, Marcel Martínez‐Porchas, Asunción Lago‐Lestón
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0162328

Population Genetic Structure of Aedes fluviatilis (Diptera: Culicidae)
Cited by: 20
Author(s): Laura Cristina Multini, André Barretto Bruno Wilke, Lincoln Suesdek, Mauro Toledo Marrelli
Software Mentions: 2
Published: about 10 years ago

10.1136/bmjopen-2016-013844

TAxonomy of Self-reported Sedentary behaviour Tools (TASST) framework for development, comparison and evaluation of self-report tools: content analysis and systematic review
Cited by: 40
Author(s): Philippa M. Dall, Elaine Coulter, Claire Fitzsimons, Dawn A. Skelton, Sébastien Chastin
Software Mentions: 2
Published: over 9 years ago

10.1007/s13280-017-0929-3

Concentrations of lead and other elements in the liver of the white-tailed eagle (Haliaeetus albicilla), a European flagship species, wintering in Eastern Poland
Cited by: 28
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pntd.0005377

Comparative analysis of gut microbiota of mosquito communities in central Illinois
Cited by: 98
Author(s): Ephantus J. Muturi, José L. Ramirez, Alejandro P. Rooney, Chang‐Hyun Kim
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0234627

Cuscuta seeds: Diversity and evolution, value for systematics/identification and exploration of allometric relationships
Cited by: 10
Author(s): Magdalena Olszewski, Meghan Dilliott, Ignacio García-Ruíz, Behrang Bendarvandi, Mihai Costea
Software Mentions: 2
Published: over 6 years ago

10.3390/plants10051023

Regions of Chromosome 2A of Bread Wheat (Triticum aestivum L.) Associated with Variation in Physiological and Agronomical Traits under Contrasting Water Regimes
Cited by: 7
Author(s): Т. А. Пшеничникова, С. В. Осипова, Olga Smirnova, И. Н. Леонова, M. D. Permyakova, A. V. Permyakov, E. G. Rudikovskaya, Dmitrii K. Konstantinov, В. В. Верхотуров, U. Lohwasser, Andreas Börner
Software Mentions: 2
Published: over 5 years ago

10.1186/s12917-021-02841-w

Blood cultures and blood microbiota analysis as surrogates for bronchoalveolar lavage fluid analysis in dogs with bacterial pneumonia
Cited by: 5
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: over 5 years ago

10.1186/s12862-019-1442-z

Genetic and morphological divergence at a biogeographic break in the beach-dwelling brooder Excirolana hirsuticauda Menzies (Crustacea, Peracarida)
Cited by: 15
Author(s): Pilar A. Haye, Nicolás I. Segovia, Andrea I. Varela, Rodrigo Rojas, Marcelo M. Rivadeneira, Martín Thiel
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0248890

Detection of genetic divergence among some wheat (Triticum aestivum L.) genotypes using molecular and biochemical indicators under salinity stress
Cited by: 13
Author(s): Salah M. Gowayed, Diaa Abd El-Moneim
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0076431

The Choice of PCR Primers Has Great Impact on Assessments of Bacterial Community Diversity and Dynamics in a Wastewater Treatment Plant
Cited by: 95
Author(s): Nils Johan Fredriksson, Malte Hermansson, Britt‐Marie Wilén
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0166765

Deforestation Impacts on Bat Functional Diversity in Tropical Landscapes
Cited by: 44
Author(s): Rodrigo García‐Morales, Claudia E. Moreno, Ernesto I. Badano, Iriana Zuria, Jorge Galindo‐González, Alberto E. Rojas-Martínez, Eva Samanta Ávila-Gómez
Software Mentions: 2
Published: almost 10 years ago

10.1080/20022727.2018.1551596

Microcosm biofilms cultured from different oral niches in periodontitis patients
Cited by: 35
Author(s): Fabian Cieplik, Egija Zaura, Bernd W. Brandt, Mark J. Buijs, Wolfgang Buchalla, Wim Crielaard, Marja L. Laine, Dongsheng Deng, R.A.M. Exterkate
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0168860

Effects of Propidium Monoazide (PMA) Treatment on Mycobiome and Bacteriome Analysis of Cystic Fibrosis Airways during Exacerbation
Cited by: 21
Author(s): Linh D. N. Nguyen, Pieter Deschaght, Sophie Merlin, Alexandre Loywick, Christophe Audebert, S. Van Daele, Éric Viscogliosi, Mario Vaneechoutte, Laurence Delhaès
Software Mentions: 2
Published: almost 10 years ago

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