bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.3390/insects12040341

Wing Morphometrics of Aedes Mosquitoes from North-Eastern France
Cited by: 8
Author(s): Jean-Philippe Martinet, Hubert Ferté, Pacôme Sientzoff, Eva Krupa, Bruno Mathieu, Jérôme Depaquit
Software Mentions: 2
Published: about 5 years ago

10.1038/sdata.2017.47

X-ray computed tomography library of shark anatomy and lower jaw surface models
Cited by: 16
Author(s): Pepijn Kamminga, Paul W. de Bruin, Jacob Geleijns, Martin D. Brazeau
Software Mentions: 2
Published: about 9 years ago

10.3389/fmicb.2018.00354

Linking the Effect of Antibiotics on Partial-Nitritation Biofilters: Performance, Microbial Communities and Microbial Activities
Cited by: 34
Author(s): Alejandro González‐Martínez, Alejandro Margareto, Alejandro Rodríguez-Sánchez, Chiara Pesciaroli, M. Silvia Díaz˗Cruz, Damià Barceló, Riku Vahala
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2014.00473

Biogeographic congruency among bacterial communities from terrestrial sulfidic springs
Cited by: 23
Author(s): Brendan Headd, Annette Summers Engel
Software Mentions: 2
Published: over 11 years ago

10.1186/s12898-018-0164-1

Interference competition as a key determinant for spatial distribution of mangrove crabs
Cited by: 19
Author(s): Stefano Cannicci, Marco Fusi, Filippo Cimò, Farid Dahdouh‐Guebas, Sara Fratini
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2016.01286

Salicornia strobilacea (Synonym of Halocnemum strobilaceum) Grown under Different Tidal Regimes Selects Rhizosphere Bacteria Capable of Promoting Plant Growth
Cited by: 41
Author(s): Ramona Marasco, Francesca Mapelli, Eleonora Rolli, María J. Mosqueira, Marco Fusi, Paola Bariselli, M. Venkat Ram Reddy, Ameur Chérif, George Tsiamis, Sara Borin, Daniele Daffonchio
Software Mentions: 2
Published: almost 10 years ago

10.3897/mycokeys.61.38175

Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts
Cited by: 5
Author(s): Emilia Ossowska, Beata Guzow-Krzemińska, Marta Kolanowska, Katarzyna Szczepańska, Martin Kukwa
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2015.01168

Seasonal and spatial patterns of microbial diversity along a trophic gradient in the interconnected lakes of the Osterseen Lake District, Bavaria
Cited by: 48
Author(s): Katrin Zwirglmaier, Katharina Keiz, Marion Engel, Juergen Geist, Uta Raeder
Software Mentions: 2
Published: over 10 years ago

10.3389/fmicb.2018.00851

Rearing Water Treatment Induces Microbial Selection Influencing the Microbiota and Pathogen Associated Transcripts of Cod (Gadus morhua) Larvae
Cited by: 28
Author(s): Ragnhild Inderberg Vestrum, Kari J.K. Attramadal, Per Winge, Keshuai Li, Yngvar Ôlsen, Atle M. Bones, Ôlav Vadstein, Ingrid Bakke
Software Mentions: 2
Published: about 8 years ago

10.1002/mnfr.201900403

A Two‐Week Treatment with Plant Extracts Changes Gut Microbiota, Caecum Metabolome, and Markers of Lipid Metabolism in ob/ob Mice
Cited by: 14
Author(s): Amandine Brochot, Vincent Azalbert, Jean‐François Landrier, Franck Tourniaire, Matteo Sérino
Software Mentions: 2
Published: almost 7 years ago

10.1002/mgg3.934

MtDNA polymorphism analyses in the Chinese Mongolian group: Efficiency evaluation and further matrilineal genetic structure exploration
Cited by: 11
Author(s): Qiong Lan, Ting Xie, Xiaoye Jin, Yingying Fang, Shuyan Mei, Guang Yang, Bofeng Zhu
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2019.02523

Culture-Dependent and -Independent Analyses Reveal the Diversity, Structure, and Assembly Mechanism of Benthic Bacterial Community in the Ross Sea, Antarctica
Cited by: 15
Author(s): Anzhang Li, Xiqiu Han, Mingxia Zhang, Zhihui Yang, Meng Chen, Qing Yao, Honghui Zhu
Software Mentions: 2
Published: over 6 years ago

10.1136/bmjopen-2016-013844

TAxonomy of Self-reported Sedentary behaviour Tools (TASST) framework for development, comparison and evaluation of self-report tools: content analysis and systematic review
Cited by: 40
Author(s): Philippa M. Dall, Elaine Coulter, Claire Fitzsimons, Dawn A. Skelton, Sébastien Chastin
Software Mentions: 2
Published: about 9 years ago

10.3389/fmicb.2020.571009

Monitoring of Nitrification in Chloraminated Drinking Water Distribution Systems With Microbiome Bioindicators Using Supervised Machine Learning
Cited by: 8
Author(s): Vicente Gomez-Alvarez, Randy P. Revetta
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.01686

Pathobiomes Differ between Two Diseases Affecting Reef Building Coralline Algae
Cited by: 10
Author(s): Anne-Leïla Meistertzheim, Maggy M. Nugues, Gaëlle Quéré, Pierre E. Galand
Software Mentions: 2
Published: almost 9 years ago

10.3389/fmicb.2017.01849

Reclassification of Paenibacillus riograndensis as a Genomovar of Paenibacillus sonchi: Genome-Based Metrics Improve Bacterial Taxonomic Classification
Cited by: 24
Author(s): Fernando Hayashi Sant’Anna, Adriana Ambrosini, Rocheli de Souza, Gabriela de Carvalho Fernandes, Evelise Bach, Eduardo Balsanelli, Valter A. Baura, Luciana Fernandes de Brito, Volker F. Wendisch, Fábio de Oliveira Pedrosa, Emanuel Maltempi de Souza, Luciane Maria Pereira Passaglia
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2019.00537

Fungal Community Structural and Microbial Functional Pattern Changes After Soil Amendments by Oilseed Meals of Jatropha curcas and Camelina sativa: A Microcosm Study
Cited by: 10
Author(s): Ping Hu, Liangjun Wu, Emily B. Hollister, Autumn S. Wang, Anilkumar C. Somenahally, Frank M. Hons, Terry J. Gentry
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2012.00422

Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change
Cited by: 51
Author(s): Sophie Charvet, Warwick F. Vincent, A. Comeau, Connie Lovejoy
Software Mentions: 2
Published: over 14 years ago

10.3389/fmicb.2020.00683

Impact of Salinity on the Gastrointestinal Bacterial Community of Theodoxus fluviatilis
Cited by: 12
Author(s): Carmen Kivistik, Jan Knobloch, Kairi Käiro, Helen Tammert, Veljo Kisand, Jan‐Peter Hildebrandt, Daniel P. R. Herlemann
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2018.02882

Low-Abundance Members of the Firmicutes Facilitate Bioremediation of Soil Impacted by Highly Acidic Mine Drainage From the Malanjkhand Copper Project, India
Cited by: 67
Author(s): Abhishek Gupta, Avishek Dutta, Jayeeta Sarkar, M. K. Panigrahi, Pinaki Sar
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2019.01937

Root-Associated Microbial Communities of Abies nordmanniana: Insights Into Interactions of Microbial Communities With Antioxidative Enzymes and Plant Growth
Cited by: 16
Author(s): Adriana M. García-Lemos, Dominik K. Großkinsky, Michaela Schiller Stokholm, Ole Lund, Mette Haubjerg Nicolaisen, Thomas Roitsch, Bjarke Veierskov, Ole Nybroe
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2019.02365

Temporal Dynamics of the Soil Metabolome and Microbiome During Simulated Anaerobic Soil Disinfestation
Cited by: 44
Author(s): Shashika S. Hewavitharana, Emmi Klarer, Andrew J. Reed, Rachel Leisso, Brenton C. Poirier, Loren Honaas, David R. Rudell, Mark Mazzola
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.00996

Bacterial Community 16S rRNA Gene Sequencing Characterizes Riverine Microbial Impact on Lake Michigan
Cited by: 26
Author(s): Cindy H. Nakatsu, Muruleedhara N. Byappanahalli, Meredith B. Nevers
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2016.00752

Snapshot of a Bacterial Microbiome Shift during the Early Symptoms of a Massive Sponge Die-Off in the Western Mediterranean
Cited by: 36
Author(s): Andrea Blanquer, María Jesús Uriz, Emma Cebrián, Pierre E. Galand
Software Mentions: 2
Published: about 10 years ago

10.3389/fmicb.2018.02903

Water Quality and Total Microbial Load: A Double-Threshold Identification Procedure Intended for Space Applications
Cited by: 6
Author(s): Stefano Amalfitano, Caterina Levantesi, Laurent Garrelly, D. Giacosa, Francesca Bersani, Simona Rossetti
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2017.01585

Succession and Fermentation Products of Grass Carp (Ctenopharyngodon idellus) Hindgut Microbiota in Response to an Extreme Dietary Shift
Cited by: 68
Author(s): Yao Tong Hao, Shan Wu, Fan Xiong, Ngoc Tuan Tran, Ivan Jakovlić, Hong Zou, Wen Xiang Li, Gui Tang Wang
Software Mentions: 2
Published: almost 9 years ago

10.3389/fmicb.2018.01796

Biases in Prokaryotic Community Amplicon Sequencing Affected by DNA Extraction Methods in Both Saline and Non-saline Soil
Cited by: 12
Author(s): Kehui Xie, Yong Deng, Xuze Zhang, Xueting Wang, Guangbo Kang, Liang Bai, He Huang
Software Mentions: 2
Published: almost 8 years ago

10.3390/molecules24101955

Technologies for the Selection, Culture and Metabolic Profiling of Unique Rhizosphere Microorganisms for Natural Product Discovery
Cited by: 13
Author(s): Saliya Gurusinghe, Tabin L. Brooks, Russell A. Barrow, Xiaocheng Zhu, Agasthya Thotagamuwa, Paul G. Dennis, Vadakattu V. S. R. Gupta, Thiru Vanniasinkam, Leslie A. Weston
Software Mentions: 2
Published: about 7 years ago

10.1186/s13568-018-0644-x

Disease outbreak accompanies the dispersive structure of shrimp gut bacterial community with a simple core microbiota
Cited by: 48
Author(s): Zhiyuan Yao, Kunjie Yang, Lei Huang, Xiaolin Huang, Linglin Qiuqian, Kai Wang, Demin Zhang
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2018.03275

The Influence of Bt Maize Cultivation on Communities of Arbuscular Mycorrhizal Fungi Revealed by MiSeq Sequencing
Cited by: 15
Author(s): Huilan Zeng, Wang Zhong, Fengxiao Tan, Yinghua Shu, Ying Feng, Jianwu Wang
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.00279

Cultivation-Independent and Cultivation-Dependent Analysis of Microbes in the Shallow-Sea Hydrothermal System Off Kueishantao Island, Taiwan: Unmasking Heterotrophic Bacterial Diversity and Functional Capacity
Cited by: 23
Author(s): Kai Tang, Yao Zhang, Dan Lin, Han Yu, Chen‐Tung Arthur Chen, Deli Wang, Yu‐Shih Lin, Jia Sun, Qiang Zheng, Nianzhi Jiao
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2018.00857

Rhizosphere Protists Change Metabolite Profiles in Zea mays
Cited by: 19
Author(s): Anke Kuppardt, Thomas Fester, Claus Härtig, Antonis Chatzinotas
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2015.00379

Cropping systems modulate the rate and magnitude of soil microbial autotrophic CO2 fixation in soil
Cited by: 39
Author(s): Xin Wu, Tida Ge, Wei Wang, Yuan Huang, Carl‐Eric Wegner, Zhenke Zhu, Andrew S. Whiteley, Jinshui Wu
Software Mentions: 2
Published: about 11 years ago

10.3389/fmicb.2019.00983

Characterization of the Castanopsis carlesii Deadwood Mycobiome by Pacbio Sequencing of the Full-Length Fungal Nuclear Ribosomal Internal Transcribed Spacer (ITS)
Cited by: 17
Author(s): Witoon Purahong, Ausana Mapook, Yuting Wu, Chaur-Tzuhn Chen
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2020.00012

The Role of Microbial Mats in the Removal of Hexavalent Chromium and Associated Shifts in Their Bacterial Community Composition
Cited by: 11
Author(s): Raeid M. M. Abed, Mary Shanti, T. S. Muthukrishnan, Zayana Al-Riyami, Bernhard Pracejus, Daniel Moraetis
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2014.00786

Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea
Cited by: 33
Author(s): Carlo Berg, Luisa Listmann, Verona Vandieken, Angela Vogts, Klaus Jürgens
Software Mentions: 2
Published: over 11 years ago

10.1186/s12885-020-07007-9

Integration of genomics, metagenomics, and metabolomics to identify interplay between susceptibility alleles and microbiota in adenoma initiation
Cited by: 9
Author(s): Jacob E. Moskowitz, Anthony Doran, Zhentian Lei, Susheel Bhanu Busi, Marcia L. Hart, Craig L. Franklin, Lloyd W. Sumner, Thomas M. Keane
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2017.01385

Bacteria Associated to Plants Naturally Selected in a Historical PCB Polluted Soil Show Potential to Sustain Natural Attenuation
Cited by: 23
Author(s): Lorenzo Vergani, Francesca Mapelli, Ramona Marasco, Elena Crotti, Marco Fusi, Antonio Di Guardo, Stefano Armiraglio, Daniele Daffonchio, Sara Borin
Software Mentions: 2
Published: almost 9 years ago

10.3389/fmicb.2016.01782

Distinct Factors Shape Aquatic and Sedimentary Microbial Community Structures in the Lakes of Western China
Cited by: 47
Author(s): Jian Yang, Hongchen Jiang, Geng Wu, Wen Li, Guojing Zhang
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2016.01612

Interactions between Obesity Status and Dietary Intake of Monounsaturated and Polyunsaturated Oils on Human Gut Microbiome Profiles in the Canola Oil Multicenter Intervention Trial (COMIT)
Cited by: 60
Author(s): Shuaihua Pu, Hamidreza Khazanehei, Peter J H Jones, Ehsan Khafipour
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2020.01352

Galactooligosaccharides and Resistant Starch Altered Microbiota and Short-Chain Fatty Acids in an in vitro Fermentation Study Using Gut Contents of Mud Crab (Scylla paramamosain)
Cited by: 19
Author(s): Ngoc Tuan Tran, Yong Tang, Zhongzhen Li, Ming Zou, Xiaobo Wen, Hongyu Ma, Shengkang Li
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2019.01712

Indigenous Yeast Interactions in Dual-Starter Fermentations May Improve the Varietal Expression of Moschofilero Wine
Cited by: 19
Author(s): Aspasia Nisiotou, Athanasios Mallouchos, Chrysoula C. Tassou, Georgios Banilas
Software Mentions: 2
Published: almost 7 years ago

10.1007/s13205-014-0238-5

Diversified diazotrophs associated with the rhizosphere of Western Indian Himalayan native red kidney beans (Phaseolus vulgaris L.)
Cited by: 24
Author(s): Deep Chandra Suyal, Amit Yadav, Yogesh S. Shouche
Software Mentions: 2
Published: almost 12 years ago

10.3390/microorganisms9081778

From Water into Sediment—Tracing Freshwater Cyanobacteria via DNA Analyses
Cited by: 13
Author(s): Ebuka Canisius Nwosu, Patricia Roeser, Shuai Yang, Lars Ganzert, Olaf Dellwig, Sylvia Pinkerneil, Achim Brauer, Elke Dittmann, Dirk Wagner, Susanne Liebner
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2016.01341

Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Cited by: 59
Author(s): Lucas Dantas Lopes, Michele de Cássia Pereira e Silva, Fernando Dini Andreote
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2017.01231

Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
Cited by: 26
Author(s): Yiseul Kim, William Van Bonn, Tiong Gim Aw, Joan B. Rose
Software Mentions: 2
Published: almost 9 years ago

10.3390/microorganisms8060908

Future Climate Significantly Alters Fungal Plant Pathogen Dynamics during the Early Phase of Wheat Litter Decomposition
Cited by: 17
Author(s): Sara Fareed Mohamed Wahdan, Shakhawat Hossen, Benjawan Tanunchai, Martin Schädler, François Buscot, Witoon Purahong
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2019.02969

Forage Rotations Conserve Diversity of Arbuscular Mycorrhizal Fungi and Soil Fertility
Cited by: 26
Author(s): Elisa Pellegrino, Hannes A. Gamper, Valentina Ciccolini, Laura Ercoli
Software Mentions: 2
Published: over 6 years ago

10.3390/microorganisms9051088

Metagenomics Analysis Reveals an Extraordinary Inner Bacterial Diversity in Anisakids (Nematoda: Anisakidae) L3 Larvae
Cited by: 4
Author(s): Susana C. Arcos, Felipe Lira, Lee Robertson, Miguel Ángel González Rebollo, Noelia Carballeda-Sangiao, Isabel Sánchez‐Alonso, Laura Zamorano, Mercedes Careche, Yolanda Jiménez‐Ruiz, Ricardo Ramos, Carlos Lloréns, Miguel González‐Muñoz, Antonio Oliver, José Luis Martínez, Andrés Navas
Software Mentions: 2
Published: about 5 years ago

10.1186/s12915-019-0702-0

Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
Cited by: 18
Author(s): Isidro Álvarez‐Escribano, Christoph Sasse, Jin Woo Bok, Hyunsoo Na, Mojgan Amirebrahimi, Anna Lipzen, Wendy Schackwitz, Joel Martin, Kerrie Barry, Gabriel Gutiérrez, Sara Cea-Sánchez, Ana T. Marcos, Igor V. Grigoriev, Nancy P. Keller, Gerhard H. Braus, David Cánovas
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2018.01996

Identification of Distinct Unmutated Chronic Lymphocytic Leukemia Subsets in Mice Based on Their T Cell Dependency
Cited by: 7
Author(s): Simar Pal Singh, Marjolein J. W. de Bruijn, Mariana P. de Almeida, Ruud W. J. Meijers, Lars Nitschke, Anton W. Langerak, Saravanan Y. Pillai, Ralph Stadhouders, Rudolf W. Hendriks
Software Mentions: 2
Published: over 7 years ago

10.3389/fncel.2016.00152

A Novel Form of Compensation in the Tg2576 Amyloid Mouse Model of Alzheimer’s Disease
Cited by: 5
Author(s): Attila Somogyi, Zoltán Katonai, Alán Alpár, Ervin Wolf
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12915-015-0192-7

Sympatric ecological divergence associated with a color polymorphism
Cited by: 27
Author(s): Henrik Kusche, Kathryn R. Elmer, Axel Meyer
Software Mentions: 2
Published: over 10 years ago

10.3389/fgene.2021.679162

Screening and Mapping for Head Blast Resistance in a Panel of CIMMYT and South Asian Bread Wheat Germplasm
Cited by: 15
Author(s): Xinyao He, Philomin Juliana, Muhammad Rezaul Kabir, Krishna Kanta Roy, Rabiul Islam, Félix Marza, Gary L. Peterson, Gyanendra Singh, Aakash Chawade, Arun Kumar Joshi, Ravi P. Singh, Pawan Kumar Singh
Software Mentions: 2
Published: about 5 years ago

10.3390/microorganisms7120682

Temperature Effects on Methanogenesis and Sulfidogenesis during Anaerobic Digestion of Sulfur-Rich Macroalgal Biomass in Sequencing Batch Reactors
Cited by: 17
Author(s): Heejung Jung, Jaai Kim, Changsoo Lee
Software Mentions: 2
Published: over 6 years ago

10.3390/microorganisms9071373

Can Potato Plants Be Colonized with the Fungi Metarhizium and Beauveria under Their Natural Load in Agrosystems?
Cited by: 15
Author(s): Maksim Tyurin, Мarsel R. Kabilov, Н. В. Смирнова, Oksana G. Tomilova, O. N. Yaroslavtseva, Tatyana Alikina, В. В. Глупов, V. Yu. Kryukov
Software Mentions: 2
Published: almost 5 years ago

10.3390/foods9050595

Molecular Characterization and Enological Potential of A High Lactic Acid-Producing Lachancea thermotolerans Vineyard Strain
Cited by: 27
Author(s): Georgios Sgouros, Athanasios Mallouchos, Maria-Evangelia Filippousi, Georgios Banilas, Aspasia Nisiotou
Software Mentions: 2
Published: about 6 years ago

10.3389/fcimb.2021.629723

The Oral Microbiome in Periodontal Health
Cited by: 41
Author(s): Magdalena Lenartova, Barbora Tesinska, Taťjana Janatová, Ondrej Hrebicek, Jaroslav Myšák, Jiřı́ Janata, Lucie Najmanová
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2021.676791

Day 7 Embryos Change the Proteomics and Exosomal Micro-RNAs Content of Bovine Uterine Fluid: Involvement of Innate Immune Functions
Cited by: 5
Author(s): Kaoru Kusama, Mohammad Bazlur Rashid, Rasoul Kowsar, Mohamed Ali Marey, Anup Kumar Talukder, Kentaro Nagaoka, M. Shimada, Hasan Khatib, Kazuhiko Imakawa, Akio Miyamoto
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2019.00171

Modulation of Intestinal Microbiota in Solea senegalensis Fed Low Dietary Level of Ulva ohnoi
Cited by: 24
Author(s): Silvana Tapia‐Paniagua, Milena Fumanal, Victoria Anguís, Catalina Fernández‐Díaz, Francisco Javier Alarcón, Miguel A. Moriñigo, M.C. Balebona
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.00495

Host Age Affects the Development of Southern Catfish Gut Bacterial Community Divergent From That in the Food and Rearing Water
Cited by: 47
Author(s): Zhimin Zhang, Dapeng Li, Mohamed M. Refaey, Weigang Xu, Rong Tang, Li Li
Software Mentions: 2
Published: about 8 years ago

10.1007/s11356-021-12750-y

Does river channelization increase the abundance of invasive crayfish? Survey of Faxonius limosus in small Central European streams
Cited by: 1
Author(s): Maciej Bonk, Rafał Bobrek
Software Mentions: 2
Published: over 5 years ago

10.1186/s12859-019-3153-2

3-Dimensional facial expression recognition in human using multi-points warping
Cited by: 11
Author(s): Olalekan Agbolade, Azree Nazri, Razali Yaakob, Abdul Ghani, Yoke Kqueen Cheah
Software Mentions: 2
Published: over 6 years ago

10.1186/s13072-017-0165-x

Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning
Cited by: 17
Author(s): Gabriel Gutiérrez, Gonzalo Millán-Zambrano, Daniel A. Medina, Antonio Jordán-Pla, Jose E. Pérez-Ortı́n, Xenia Peñate, Sebastián Chávez
Software Mentions: 2
Published: over 8 years ago

10.1186/1471-2180-12-140

Diversity and dynamics of Archaea in an activated sludge wastewater treatment plant
Cited by: 41
Author(s): Nils Johan Fredriksson, Malte Hermansson, Britt‐Marie Wilén
Software Mentions: 2
Published: over 14 years ago

10.1007/s10661-017-6135-8

Trace element concentrations in livers of Common Buzzards Buteo buteo from eastern Poland
Cited by: 5
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak, Grzegorz Pitucha
Software Mentions: 2
Published: almost 9 years ago

10.1007/s00267-017-0833-4

Specific Vicariance of Two Primeval Lowland Forest Lichen Indicators
Cited by: 7
Author(s): Dariusz Kubiak, Piotr Osyczka
Software Mentions: 2
Published: over 9 years ago

10.1186/s12866-020-01923-3

Metagenomics revealing molecular profiling of community structure and metabolic pathways in natural hot springs of the Sikkim Himalaya
Cited by: 29
Author(s): Nitish Sharma, Jitesh Kumar, Md Minhajul Abedin, Dinabandhu Sahoo, Ashok Pandey, Amit Kumar, Sudhir P. Singh
Software Mentions: 2
Published: almost 6 years ago

10.1002/ece3.5040

Different responses of avian feeding guilds to spatial and environmental factors across an elevation gradient in the central Himalaya
Cited by: 21
Author(s): Zhifeng Ding, Jiankun Liang, Yiming Hu, Zhixin Zhou, Sun Hongbin, Lina Liu, Haijun Liu, Huijian Hu, Xingfeng Si
Software Mentions: 2
Published: about 7 years ago

10.3390/microorganisms8101484

Seasonality in Spatial Turnover of Bacterioplankton Along an Ecological Gradient in the East China Sea: Biogeographic Patterns, Processes and Drivers
Cited by: 7
Author(s): Hanjing Hu, Jiaying He, Huizhen Yan, Dandi Hou, Demin Zhang, Lian Liu, Kai Wang
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms8060938

Sex-Specific Associations between Gut Prevotellaceae and Host Genetics on Adiposity
Cited by: 26
Author(s): Amelia Marti, José Ignacio Riezu-Boj, Elizabeth Guruceaga, Fermı́n I. Milagro, J. Alfredo Martínéz
Software Mentions: 2
Published: almost 6 years ago

10.3390/microorganisms7020033

Cave Drip Water-Related Samples as a Natural Environment for Aromatic Hydrocarbon-Degrading Bacteria
Cited by: 15
Author(s): Eric de Lima Silva Marques, Gislaine S. Silva, João Carlos Teixeira Dias, Eduardo Gross, Moara Silva Costa, Rachel Passos Rezende
Software Mentions: 2
Published: over 7 years ago

10.1186/1471-2202-13-68

Somato-dendritic morphology and dendritic signal transfer properties differentiate between fore- and hindlimb innervating motoneurons in the frog Rana esculenta
Cited by: 0
Author(s): András Stelescu, János Sümegi, Ildikó Wéber, András Birinyi, Ervin Wolf
Software Mentions: 2
Published: almost 14 years ago

10.1007/s11356-016-7554-8

Analysis of morphological and molecular composition changes in allergenic Artemisia vulgaris L. pollen under traffic pollution using SEM and FTIR spectroscopy
Cited by: 37
Author(s): Joanna Depciuch, Idalia Kasprzyk, Elzbieta Roga, Magdalena Parlinska-Wojtan
Software Mentions: 2
Published: over 9 years ago

10.1002/ece3.2220

Leaf litter arthropod responses to tropical forest restoration
Cited by: 54
Author(s): Rebecca J. Cole, Karen D. Holl, Rakan A. Zahawi, Philipp Wickey, Alan R. Townsend
Software Mentions: 2
Published: almost 10 years ago

10.1002/ece3.1828

Patterns of contact call differentiation in the panmictic East African Abyssinian White‐eye Z osterops abyssinicus (Aves: Passeriformes)
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Author(s): Jan Christian Habel, Martin Husemann, Werner Ulrich
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0223932

Evaluation of bacterial proliferation with a microfluidic-based device: Antibiochip
Cited by: 0
Author(s): Valentina Gallo, Alessia Ruiba, Massimo Zanin, Paolo Begnamino, S. Ledda, Tiziana Pesce, Giovanni Melioli, M. Pizzi
Software Mentions: 2
Published: over 6 years ago

10.1186/s13568-021-01182-z

Soil fertilization affects the abundance and distribution of carbon and nitrogen cycling genes in the maize rhizosphere
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Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.3074

Dampening of population cycles in voles affects small mammal community structure, decreases diversity, and increases prevalence of a zoonotic disease
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Author(s): Frauke Ecke, David G. Angeler, Магнус Магнуссон, Hussein Khalil, Birger Hörnfeldt
Software Mentions: 2
Published: almost 9 years ago

10.3390/microorganisms9020355

Landscape Setting Drives the Microbial Eukaryotic Community Structure in Four Swedish Mountain Lakes over the Holocene
Cited by: 4
Author(s): Eric Capo, Sofia Ninnes, Isabelle Domaizon, Stefan Bertilsson, Christian Bigler, Xiaoru Wang, Richard Bindler, Johan Rydberg
Software Mentions: 2
Published: over 5 years ago

10.3390/ani11020367

Establishing Cell Lines from Fresh or Cryopreserved Tissue from the Great Crested Newt (Triturus cristatus): A Preliminary Protocol
Cited by: 4
Author(s): Julie Strand, Henrik Callesen, Cino Pertoldi, Stig Purup
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms9071419

Metagenomic Insight into the Community Structure of Maize-Rhizosphere Bacteria as Predicted by Different Environmental Factors and Their Functioning within Plant Proximity
Cited by: 12
Author(s): Saheed Adekunle Akinola, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
Software Mentions: 2
Published: almost 5 years ago

10.1002/ece3.6504

Hidden diversity in Antarctica: Molecular and morphological evidence of two different species within one of the most conspicuous ascidian species
Cited by: 6
Author(s): Micaela Ruiz, Anabela Taverna, Natalia Servetto, Ricardo Sahade, Christoph Held
Software Mentions: 2
Published: almost 6 years ago

10.1007/s10493-020-00587-y

Patterns of intraspecific morphological variability in soil mites reflect their dispersal ability
Cited by: 1
Author(s): Julia Baumann
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms9081657

Oral Microbiota Identifies Patients in Early Onset Rheumatoid Arthritis
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Author(s): Anders Esberg, Linda Johansson, Ingegerd Johansson, Solbritt Rantapää-Dahlqvist
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2016.00666

Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities
Cited by: 19
Author(s): Ali Nawaz, Witoon Purahong, Robert Lehmann, Martina Herrmann, Kirsten Küsel, Kai Uwe Totsche, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0068429

Invasion Is a Community Affair: Clandestine Followers in the Bacterial Community Associated to Green Algae, Caulerpa racemosa, Track the Invasion Source
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Author(s): Tânia Aires, Ester A. Serrão, Gary A. Kendrick, Carlos M. Duarte, Sophie Arnaud–Haond
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0188864

InDel marker based genetic differentiation and genetic diversity in traditional rice (Oryza sativa L.) landraces of Chhattisgarh, India
Cited by: 14
Author(s): Parmeshwar K. Sahu, Suvendu Mondal, Deepak Sharma, Gautam Vishwakarma, Vikash Kumar, Bikram Das
Software Mentions: 2
Published: over 8 years ago

10.1186/s12870-021-03037-y

Transcriptomic resources for prairie grass (Bromus catharticus): expressed transcripts, tissue-specific genes, and identification and validation of EST-SSR markers
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Author(s): Ming Sun, Zhixiao Dong, Jian Yang, Wen Bing Wu, Chenglin Zhang, Jianbo Zhang, Junlong Zhao, Yi Xiong, Shangang Jia, Xiao Ma
Software Mentions: 2
Published: almost 5 years ago

10.3390/microorganisms8040581

Effect of Inoculum Pretreatment on the Composition of Microbial Communities in Anaerobic Digesters Producing Volatile Fatty Acids
Cited by: 26
Author(s): Lucía Blasco, Minna Kahala, Elina Tampio, Markku Vainio, Satu Ervasti, Saija Rasi
Software Mentions: 2
Published: about 6 years ago

10.1186/s12866-020-1717-y

Diversity and geographic distribution of soil streptomycetes with antagonistic potential against actinomycetoma-causing Streptomyces sudanensis in Sudan and South Sudan
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Author(s): Mohamed E. Hamid, Thomas Reitz, Martin R.P. Joseph, Kerstin Hommel, Adil Mahgoub, Mogahid M. Elhassan, François Buscot, Mika Tarkka
Software Mentions: 2
Published: over 6 years ago

10.1007/s00244-017-0481-y

Factors Affecting Element Concentrations in Eggshells of Three Sympatrically Nesting Waterbirds in Northern Poland
Cited by: 3
Author(s): Ignacy Kitowski, Dariusz Jakubas, Piotr Indykiewicz, Dariusz Wiącek
Software Mentions: 2
Published: over 8 years ago

10.3390/microorganisms7110518

Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem
Cited by: 11
Author(s): Despoina Vokou, Savvas Genitsaris, Katerina Karamanoli, Katerina Vareli, Marina Zachari, Despoina Voggoli, Nikolaos Monokrousos, John M. Halley, Ioannis Sainis
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2017.00593

Microbial and Isotopic Evidence for Methane Cycling in Hydrocarbon-Containing Groundwater from the Pennsylvania Region
Cited by: 26
Author(s): Adrien Vigneron, Andrew N. Bishop, Eric Alsop, Kellie Hull, Ileana Rhodes, R. C. Hendricks, Ian M. Head, Nicolas Tsesmetzis
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0067280

Genetic Diversity and Population Structure of Tetraploid Wheats (Triticum turgidum L.) Estimated by SSR, DArT and Pedigree Data
Cited by: 118
Author(s): Giovanni Laidò, Giacomo Mangini, Francesca Taranto, Ágata Gadaleta, A. Blanco, Luigi Cattivelli, Daniela Marone, Anna Maria Mastrangelo, Roberto Papa, Pasquale De Vita
Software Mentions: 2
Published: almost 13 years ago

10.3390/microorganisms9061214

Gut Microbiota Dynamics in Natural Populations of Pintomyia evansi under Experimental Infection with Leishmania infantum
Cited by: 4
Author(s): Rafael José Vivero, Víctor Alfonso Castañeda-Monsalve, Lupe Romero, Gregory D. D. Hurst, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera
Software Mentions: 2
Published: about 5 years ago

10.1186/s13568-019-0770-0

Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus
Cited by: 13
Author(s): Wei Feng, Jing Zhang, Ivan Jakovlić, Fan Xiong, Shangong Wu, Hong Zou, Wenxiang Li, Ming Li, Guitang Wang
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0155239

Effects of Dispersal and Initial Diversity on the Composition and Functional Performance of Bacterial Communities
Cited by: 22
Author(s): Yinghua Zha, Mercè Berga, Jérôme Comte, Silke Langenheder
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0072627

Microbial Communities of Deep-Sea Methane Seeps at Hikurangi Continental Margin (New Zealand)
Cited by: 68
Author(s): S. Emil Ruff, Julia Arnds, Katrin Knittel, Rudolf Amann, Gunter Wegener, Alban Ramette, Antje Boetius
Software Mentions: 2
Published: over 12 years ago

10.3389/fmicb.2017.00245

Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments
Cited by: 44
Author(s): Julio Bohórquez, Terry J. McGenity, Sokratis Papaspyrou, Emilio García‐Robledo, Alfonso Corzo, Graham J. C. Underwood
Software Mentions: 2
Published: over 9 years ago

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