bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1186/s12862-019-1442-z

Genetic and morphological divergence at a biogeographic break in the beach-dwelling brooder Excirolana hirsuticauda Menzies (Crustacea, Peracarida)
Cited by: 15
Author(s): Pilar A. Haye, Nicolás I. Segovia, Andrea I. Varela, Rodrigo Rojas, Marcelo M. Rivadeneira, Martín Thiel
Software Mentions: 2
Published: over 5 years ago

10.1038/srep42278

Linking gene expression to productivity to unravel long- and short-term responses of seagrasses exposed to CO2 in volcanic vents
Cited by: 20
Author(s): Irene Olivé, João Silva, Chiara Lauritano, Monya M. Costa, Miriam Ruocco, Gabriele Procaccini, Rui Santos
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep36645

Tracking modern human population history from linguistic and cranial phenotype
Cited by: 11
Author(s): Hugo Reyes-Centeno, Katerina Harvati, Gerhard Jäger
Software Mentions: 2
Published: about 8 years ago

10.3390/insects8030064

Monitoring Effect of Fire on Ant Assemblages in Brazilian Rupestrian Grasslands: Contrasting Effects on Ground and Arboreal Fauna
Cited by: 13
Author(s): Diego V. Anjos, Ricardo I. Campos, Renata Bernardes Faria Campos, Sérvio Pontes Ribeiro
Software Mentions: 2
Published: over 7 years ago

10.1038/srep31447

Simulated leakage of high pCO2 water negatively impacts bivalve dominated infaunal communities from the Western Baltic Sea
Cited by: 21
Author(s): Hanna Schade, Lisa Mevenkamp, Katja Guilini, Stefanie Meyer, Stanislav N. Gorb, Doris Abele, Alexandra Vanreusel, Frank Melzner
Software Mentions: 2
Published: over 8 years ago

10.1038/srep36169

Stepwise onset of the Icehouse world and its impact on Oligo-Miocene Central Asian mammals
Cited by: 21
Author(s): Mathias Harzhauser, Gudrun Daxner-Höck, Paloma López-Guerrero, Olivier Maridet, Adriana Oliver, Werner E. Piller, Sylvain Richoz, Margarita A. Erbajeva, Thomas A. Neubauer, Ursula B. Göhlich
Software Mentions: 2
Published: almost 8 years ago

10.1016/j.heliyon.2020.e05295

Multivariate analysis for yield and yield-related traits of sesame (Sesamum indicum L.) genotypes
Cited by: 6
Author(s): Fiseha Baraki, Zenawi Gebregergis, Yirga Belay, Muez Berhe, Goitom Teame, Mohammed Hassen, Zerabruk Gebremedhin, A Mohammad Abadi, Weres Negash, Alem Atsbeha, Goitom Araya
Software Mentions: 2
Published: about 4 years ago

10.1007/s11274-020-2806-7

Preparation and characterization of site-specific dechlorinating microbial inocula capable of complete dechlorination enriched in anaerobic microcosms amended with clay mineral
Cited by: 4
Author(s): Zsuzsanna Nagymáté, Laura Jurecska, Csaba Romsics, Ferenc Tóth, Viktória Bódai, Éva Mészáros, Attila Szabó, Balázs Erdélyi, Károly Màrialigeti
Software Mentions: 2
Published: almost 5 years ago

10.1080/08912963.2017.1341503

Eocene sand tiger sharks (Lamniformes, Odontaspididae) from the Bolca Konservat-Lagerstätte, Italy: palaeobiology, palaeobiogeography and evolutionary significance
Cited by: 13
Author(s): Giuseppe Marramà, Andrea Engelbrecht, Giorgio Carnevale, Jürgen Kriwet
Software Mentions: 2
Published: over 7 years ago

10.1590/1678-4685-GMB-2017-0031

Ecological drivers of plant genetic diversity at the southern edge of geographical distributions: Forestal vines in a temperate region
Cited by: 7
Author(s): Michel J. F. Barros, José Alexandre Felizola Diniz‐Filho, Loreta B. Freitas
Software Mentions: 2
Published: almost 7 years ago

10.3390/genes12071022

The Influence of Soil Fertilization on the Distribution and Diversity of Phosphorus Cycling Genes and Microbes Community of Maize Rhizosphere Using Shotgun Metagenomics
Cited by: 12
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 3 years ago

10.1016/j.geoderma.2019.01.001

Impact of conservation tillage in rice–based cropping systems on soil aggregation, carbon pools and nutrients
Cited by: 101
Author(s): Rajiv Nandan, Vikram Singh, S. K. Singh, Virender Kumar, Kali Krishna Hazra, Chaitanya Prasad Nath, Shishpal Poonia, R. K. Malik, Ranjan Bhattacharyya, Andrew J. McDonald
Software Mentions: 2
Published: over 5 years ago

10.1186/s43008-019-0007-5

The extremely halotolerant black yeast Hortaea werneckii - a model for intraspecific hybridization in clonal fungi
Cited by: 25
Author(s): Polona Zalar, Jerneja Zupančič, Cene Gostinčar, Janja Zajc, G.S. de Hoog, Filomena De Leo, Armando Azúa-Bustos, Nina Gunde‐Cimerman
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-017-04934-9

Large perturbations in CO2 flux and subsequent chemosynthesis are induced in agricultural soil by the addition of elemental sulfur
Cited by: 8
Author(s): Brian P. Kelleher, Paul Flanagan, Kris M. Hart, André J. Simpson, Seth F. Oppenheimer, Brian T. Murphy, Shane S. O’Reilly, Sean Jordan, Anthony Grey, A. D. Ibrahim, Christopher C. R. Allen
Software Mentions: 2
Published: over 7 years ago

10.3390/genes10100827

Comparative Study of Gut Microbiota in Wild and Captive Giant Pandas (Ailuropoda melanoleuca)
Cited by: 54
Author(s): Wei Guo, Saurabh Mishra, Chengdong Wang, Hemin Zhang, Ruihong Ning, Fanli Kong, Bo Zeng, Jiangchao Zhao, Ying Liu
Software Mentions: 2
Published: about 5 years ago

10.3389/fvets.2019.00354

Respiratory Dysbiosis in Canine Bacterial Pneumonia: Standard Culture vs. Microbiome Sequencing
Cited by: 14
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: about 5 years ago

10.3389/fpls.2018.01566

Mechanical Effects of Cellulose, Xyloglucan, and Pectins on Stomatal Guard Cells of Arabidopsis thaliana
Cited by: 20
Author(s): Hojae Yi, Yue Rui, Baris Kandemir, James Wang, Charles T. Anderson, Virendra M. Puri
Software Mentions: 2
Published: about 6 years ago

10.3389/fpls.2016.01619

Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production
Cited by: 34
Author(s): José L. Rambla, Almudena Trapero-Mozos, Gianfranco Diretto, Ángela Rubio-Moraga, Antonio Granell, Lourdes Gómez-Gómez, Oussama Ahrazem
Software Mentions: 2
Published: about 8 years ago

10.3389/fvets.2020.00115

Effects of Tilmicosin Treatment on the Nasopharyngeal Microbiota of Feedlot Cattle With Respiratory Disease During the First Week of Clinical Recovery
Cited by: 7
Author(s): Mohamed Zeineldin, James Lowe, Brian Aldridge
Software Mentions: 2
Published: over 4 years ago

10.3389/fpls.2014.00806

Genetic diversity in aspen and its relation to arthropod abundance
Cited by: 6
Author(s): Chunxia Zhang, Barbara Vornam, Katharina Volmer, Kathleen Prinz, Frauke Kleemann, Lars Köhler, Andrea Polle, Reiner Finkeldey
Software Mentions: 2
Published: almost 10 years ago

10.18699/VJ21.058

Biochemical composition of tomato fruits of various colors
Cited by: 5
Author(s): А. Б. Курина, Solovieva Ae, Khrapalova Ia, A. M. Artemyeva
Software Mentions: 2
Published: about 3 years ago

10.3389/fpls.2015.00636

Host and non-host roots in rice: cellular and molecular approaches reveal differential responses to arbuscular mycorrhizal fungi
Cited by: 67
Author(s): Valentina Fiorilli, Marta Vallino, Chiara Biselli, Antonella Faccio, Paolo Bagnaresi, Paola Bonfante
Software Mentions: 2
Published: over 9 years ago

10.3389/fnut.2021.590978

Mainstreaming Local Food Species for Nutritional and Livelihood Security: Insights From Traditional Food Systems of Adi Community of Arunachal Pradesh, India
Cited by: 3
Author(s): Ranjay K. Singh, Rakesh Bhardwaj, Anamika Singh, Temin Payum, Kumar Arvind, Anshuman Singh, L. Wangchu, Sanjay Kumar Upadhyay
Software Mentions: 2
Published: over 3 years ago

10.3389/fpls.2015.00490

Characterization of culturable bacterial endophytes and their capacity to promote plant growth from plants grown using organic or conventional practices
Cited by: 101
Author(s): Ye Xia, Seth DeBolt, Jean-Luc Dreyer, Delia Scott, Mark A. Williams
Software Mentions: 2
Published: over 9 years ago

10.3390/genes12040535

Metagenomics Assessment of Soil Fertilization on the Chemotaxis and Disease Suppressive Genes Abundance in the Maize Rhizosphere
Cited by: 6
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-017-06714-x

Bottom-up effects on herbivore-induced plant defences: a case study based on compositional patterns of rhizosphere microbial communities
Cited by: 14
Author(s): Emilio Benítez, Daniel Paredes, Estefanı́a Rodrı́guez, Diana Aldana, Mónica González, R. Nogales, Mercedes Campos, Beatriz González Moreno
Software Mentions: 2
Published: over 7 years ago

10.1128/mSphere.00208-21

Cyanophage Diversity and Community Structure in Dead Zone Sediments
Cited by: 8
Author(s): Elias Broman, Karin Holmfeldt, Stefano Bonaglia, Per Hall, Francisco J. A. Nascimento
Software Mentions: 2
Published: over 3 years ago

10.1186/s12898-018-0164-1

Interference competition as a key determinant for spatial distribution of mangrove crabs
Cited by: 19
Author(s): Stefano Cannicci, Marco Fusi, Filippo Cimò, Farid Dahdouh‐Guebas, Sara Fratini
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2017.00574

Characterization of Unexplored Deadwood Mycobiome in Highly Diverse Subtropical Forests Using Culture-independent Molecular Technique
Cited by: 30
Author(s): Witoon Purahong, Katherina A. Pietsch, Guillaume Lentendu, Ricardo Schöps, Helge Bruelheide, Christian Wirth, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2014.00105

Stormwater runoff drives viral community composition changes in inland freshwaters
Cited by: 25
Author(s): Kurt E. Williamson, Jamie V. Harris, Jasmin C. Green, Faraz Rahman, Randolph M. Chambers
Software Mentions: 2
Published: over 10 years ago

10.3389/fmicb.2018.00214

Characterization of Asymptomatic Bacteriuria Escherichia coli Isolates in Search of Alternative Strains for Efficient Bacterial Interference against Uropathogens
Cited by: 21
Author(s): Christoph Stork, Beáta Kovács, Barnabás Rózsai, Johannes Putze, Matthias Kiel, Ágnes Dorn, Judit Kovács, Szilvia Melegh, Andreas Leimbach, Tamás Kovács, G. Schneider, Mónika Kerényi, Levente Emődy, Ulrich Dobrindt
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2015.01166

Taxonomic and functional characteristics of microbial communities and their correlation with physicochemical properties of four geothermal springs in Odisha, India
Cited by: 57
Author(s): Jhasketan Badhai, Tarini Shankar Ghosh, Subrata K. Das
Software Mentions: 2
Published: about 9 years ago

10.3389/fmicb.2017.00608

Inbred Mouse Populations Exhibit Intergenerational Changes in Intestinal Microbiota Composition and Function Following Introduction to a Facility
Cited by: 16
Author(s): Jocelyn M. Choo, Paul J. Trim, Lex E. X. Leong, Guy C. J. Abell, Carly Brune, Nicole Jeffries, Steven Wesselingh, T. Neil Dear, Marten F. Snel, Geraint B. Rogers
Software Mentions: 2
Published: over 7 years ago

10.1002/mnfr.201900403

A Two‐Week Treatment with Plant Extracts Changes Gut Microbiota, Caecum Metabolome, and Markers of Lipid Metabolism in ob/ob Mice
Cited by: 14
Author(s): Amandine Brochot, Vincent Azalbert, Jean‐François Landrier, Franck Tourniaire, Matteo Sérino
Software Mentions: 2
Published: over 5 years ago

10.1002/mgg3.934

MtDNA polymorphism analyses in the Chinese Mongolian group: Efficiency evaluation and further matrilineal genetic structure exploration
Cited by: 11
Author(s): Qiong Lan, Ting Xie, Xiaoye Jin, Yingying Fang, Shuyan Mei, Guang Yang, Bofeng Zhu
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2012.00434

Lower Respiration in the Littoral Zone of a Subtropical Shallow Lake
Cited by: 8
Author(s): Ng Haig They, David da Motta Marques, Rafael Siqueira Souza
Software Mentions: 2
Published: almost 12 years ago

10.1136/bmjopen-2016-013844

TAxonomy of Self-reported Sedentary behaviour Tools (TASST) framework for development, comparison and evaluation of self-report tools: content analysis and systematic review
Cited by: 40
Author(s): Philippa M. Dall, Elaine Coulter, Claire Fitzsimons, Dawn A. Skelton, Sébastien Chastin
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2017.01911

Denitrification and Biodiversity of Denitrifiers in a High-Mountain Mediterranean Lake
Cited by: 18
Author(s): Antonio Castellano‐Hinojosa, David Correa‐Galeote, Presentación Carrillo, Eulogio J. Bedmar, Juan Manuel Medina‐Sánchez
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2018.02082

Desiccation- and Saline-Tolerant Bacteria and Archaea in Kalahari Pan Sediments
Cited by: 33
Author(s): Steffi Genderjahn, Mashal Alawi, Kai Mangelsdorf, Fabian Horn, Dirk Wagner
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2016.01046

Populations of Stored Product Mite Tyrophagus putrescentiae Differ in Their Bacterial Communities
Cited by: 35
Author(s): Tomáš Erban, Pavel B. Klimov, Jaroslav Smrž, Thomas W. Phillips, Marta Nešvorná, Jan Kopecký, Jan Hubert
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2018.01923

Genetic and Functional Diversity of Bacterial Microbiome in Soils With Long Term Impacts of Petroleum Hydrocarbons
Cited by: 64
Author(s): Anna Gałązka, Jarosław Grządziel, Rafał Gałązka, Aleksandra Ukalska‐Jaruga, Joanna Strzelecka, Bożena Smreczak
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.00648

Land Use and Seasonal Effects on the Soil Microbiome of a Brazilian Dry Forest
Cited by: 54
Author(s): Gileno Vieira Lacerda-Júnior, Melline Fontes Noronha, Lucélia Cabral, Tiago Palladino Delforno, Sanderson Tarciso Pereira de Sousa, Paulo Ivan Fernandes‐Júnior, I. S. de Melo, Valéria Maia de Oliveira
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2018.00851

Rearing Water Treatment Induces Microbial Selection Influencing the Microbiota and Pathogen Associated Transcripts of Cod (Gadus morhua) Larvae
Cited by: 28
Author(s): Ragnhild Inderberg Vestrum, Kari J.K. Attramadal, Per Winge, Keshuai Li, Yngvar Ôlsen, Atle M. Bones, Ôlav Vadstein, Ingrid Bakke
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.00537

Fungal Community Structural and Microbial Functional Pattern Changes After Soil Amendments by Oilseed Meals of Jatropha curcas and Camelina sativa: A Microcosm Study
Cited by: 10
Author(s): Ping Hu, Liangjun Wu, Emily B. Hollister, Autumn S. Wang, Anilkumar C. Somenahally, Frank M. Hons, Terry J. Gentry
Software Mentions: 2
Published: over 5 years ago

10.3390/molecules25030661

Hydrocarbon Removal by Two Differently Developed Microbial Inoculants and Comparing Their Actions with Biostimulation Treatment
Cited by: 35
Author(s): Joanna Brzeszcz, Piotr Kapusta, Teresa Steliga, A. Turkiewicz
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2014.00473

Biogeographic congruency among bacterial communities from terrestrial sulfidic springs
Cited by: 23
Author(s): Brendan Headd, Annette Summers Engel
Software Mentions: 2
Published: about 10 years ago

10.3389/fmicb.2016.01286

Salicornia strobilacea (Synonym of Halocnemum strobilaceum) Grown under Different Tidal Regimes Selects Rhizosphere Bacteria Capable of Promoting Plant Growth
Cited by: 41
Author(s): Ramona Marasco, Francesca Mapelli, Eleonora Rolli, María J. Mosqueira, Marco Fusi, Paola Bariselli, M. Venkat Ram Reddy, Ameur Chérif, George Tsiamis, Sara Borin, Daniele Daffonchio
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2018.00354

Linking the Effect of Antibiotics on Partial-Nitritation Biofilters: Performance, Microbial Communities and Microbial Activities
Cited by: 34
Author(s): Alejandro González‐Martínez, Alejandro Margareto, Alejandro Rodríguez-Sánchez, Chiara Pesciaroli, M. Silvia Díaz˗Cruz, Damià Barceló, Riku Vahala
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2017.01849

Reclassification of Paenibacillus riograndensis as a Genomovar of Paenibacillus sonchi: Genome-Based Metrics Improve Bacterial Taxonomic Classification
Cited by: 24
Author(s): Fernando Hayashi Sant’Anna, Adriana Ambrosini, Rocheli de Souza, Gabriela de Carvalho Fernandes, Evelise Bach, Eduardo Balsanelli, Valter A. Baura, Luciana Fernandes de Brito, Volker F. Wendisch, Fábio de Oliveira Pedrosa, Emanuel Maltempi de Souza, Luciane Maria Pereira Passaglia
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2015.01168

Seasonal and spatial patterns of microbial diversity along a trophic gradient in the interconnected lakes of the Osterseen Lake District, Bavaria
Cited by: 48
Author(s): Katrin Zwirglmaier, Katharina Keiz, Marion Engel, Juergen Geist, Uta Raeder
Software Mentions: 2
Published: about 9 years ago

10.3390/molecules24101955

Technologies for the Selection, Culture and Metabolic Profiling of Unique Rhizosphere Microorganisms for Natural Product Discovery
Cited by: 13
Author(s): Saliya Gurusinghe, Tabin L. Brooks, Russell A. Barrow, Xiaocheng Zhu, Agasthya Thotagamuwa, Paul G. Dennis, Vadakattu V. S. R. Gupta, Thiru Vanniasinkam, Leslie A. Weston
Software Mentions: 2
Published: over 5 years ago

10.1186/s13568-018-0644-x

Disease outbreak accompanies the dispersive structure of shrimp gut bacterial community with a simple core microbiota
Cited by: 48
Author(s): Zhiyuan Yao, Kunjie Yang, Lei Huang, Xiaolin Huang, Linglin Qiuqian, Kai Wang, Demin Zhang
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2018.00423

Halotolerant Exiguobacterium profundum PHM11 Tolerate Salinity by Accumulating L-Proline and Fine-Tuning Gene Expression Profiles of Related Metabolic Pathways
Cited by: 21
Author(s): Vikas Patel, R. P. Srivastava, Anjney Sharma, Anchal Srivastava, Surinder Singh, Alok Kumar Srivastava, Prem Lal Kashyap, Hillol Chakdar, Kurinji Pandiyan, Alok Kalra, Anil Kumar Saxena
Software Mentions: 2
Published: over 6 years ago

10.3390/molecules26092825

Quality Evaluation of Light- and Dark-Colored Hungarian Honeys, Focusing on Botanical Origin, Antioxidant Capacity and Mineral Content
Cited by: 19
Author(s): Alexandra Bodó, Lilla Radványi, Tamás Kőszegi, Rita Csepregi, Dávid U. Nagy, Ágnes Farkas, Marianna Kocsis
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2017.00792

Differing Complex Microbiota Alter Disease Severity of the IL-10−/− Mouse Model of Inflammatory Bowel Disease
Cited by: 39
Author(s): Marcia L. Hart, Aaron C. Ericsson, Craig L. Franklin
Software Mentions: 2
Published: over 7 years ago

10.1093/molbev/msaa137

Collagen Sequence Analysis Reveals Evolutionary History of Extinct West Indies Nesophontes (Island-Shrews)
Cited by: 12
Author(s): Michael Buckley, Virginia L. Harvey, Johanset Orihuela, Alexis M. Mychajliw, Joseph N. Keating, Juan N. Almonte Milán, Craig Lawless, Andrew Chamberlain, Victoria M. Egerton, Phillip L. Manning
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2012.00422

Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change
Cited by: 51
Author(s): Sophie Charvet, Warwick F. Vincent, A. Comeau, Connie Lovejoy
Software Mentions: 2
Published: almost 13 years ago

10.3389/fmicb.2019.00996

Bacterial Community 16S rRNA Gene Sequencing Characterizes Riverine Microbial Impact on Lake Michigan
Cited by: 26
Author(s): Cindy H. Nakatsu, Muruleedhara N. Byappanahalli, Meredith B. Nevers
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.01686

Pathobiomes Differ between Two Diseases Affecting Reef Building Coralline Algae
Cited by: 10
Author(s): Anne-Leïla Meistertzheim, Maggy M. Nugues, Gaëlle Quéré, Pierre E. Galand
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2020.00683

Impact of Salinity on the Gastrointestinal Bacterial Community of Theodoxus fluviatilis
Cited by: 12
Author(s): Carmen Kivistik, Jan Knobloch, Kairi Käiro, Helen Tammert, Veljo Kisand, Jan‐Peter Hildebrandt, Daniel P. R. Herlemann
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2017.01098

Marine Group II Dominates Planktonic Archaea in Water Column of the Northeastern South China Sea
Cited by: 28
Author(s): Haodong Liu, Chuanlun L. Zhang, Chunyan Yang, Songze Chen, Zhiwei Cao, Zhiwei Zhang, Jie Tian
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2019.02365

Temporal Dynamics of the Soil Metabolome and Microbiome During Simulated Anaerobic Soil Disinfestation
Cited by: 44
Author(s): Shashika S. Hewavitharana, Emmi Klarer, Andrew J. Reed, Rachel Leisso, Brenton C. Poirier, Loren Honaas, David R. Rudell, Mark Mazzola
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2018.00857

Rhizosphere Protists Change Metabolite Profiles in Zea mays
Cited by: 19
Author(s): Anke Kuppardt, Thomas Fester, Claus Härtig, Antonis Chatzinotas
Software Mentions: 2
Published: over 6 years ago

10.3390/microorganisms9081778

From Water into Sediment—Tracing Freshwater Cyanobacteria via DNA Analyses
Cited by: 13
Author(s): Ebuka Canisius Nwosu, Patricia Roeser, Shuai Yang, Lars Ganzert, Olaf Dellwig, Sylvia Pinkerneil, Achim Brauer, Elke Dittmann, Dirk Wagner, Susanne Liebner
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2016.00752

Snapshot of a Bacterial Microbiome Shift during the Early Symptoms of a Massive Sponge Die-Off in the Western Mediterranean
Cited by: 36
Author(s): Andrea Blanquer, María Jesús Uriz, Emma Cebrián, Pierre E. Galand
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2019.01937

Root-Associated Microbial Communities of Abies nordmanniana: Insights Into Interactions of Microbial Communities With Antioxidative Enzymes and Plant Growth
Cited by: 16
Author(s): Adriana M. García-Lemos, Dominik K. Großkinsky, Michaela Schiller Stokholm, Ole Lund, Mette Haubjerg Nicolaisen, Thomas Roitsch, Bjarke Veierskov, Ole Nybroe
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2019.02523

Culture-Dependent and -Independent Analyses Reveal the Diversity, Structure, and Assembly Mechanism of Benthic Bacterial Community in the Ross Sea, Antarctica
Cited by: 15
Author(s): Anzhang Li, Xiqiu Han, Mingxia Zhang, Zhihui Yang, Meng Chen, Qing Yao, Honghui Zhu
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2019.02252

Resistance Breeding of Common Bean Shapes the Physiology of the Rhizosphere Microbiome
Cited by: 34
Author(s): Lucas William Mendes, Maria Luíza Morais Barreto de Chaves, Mariley de Cássia da Fonseca, Rodrigo Mendes, Jos M. Raaijmakers, Siu Mui Tsai
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2018.02903

Water Quality and Total Microbial Load: A Double-Threshold Identification Procedure Intended for Space Applications
Cited by: 6
Author(s): Stefano Amalfitano, Caterina Levantesi, Laurent Garrelly, D. Giacosa, Francesca Bersani, Simona Rossetti
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2017.01585

Succession and Fermentation Products of Grass Carp (Ctenopharyngodon idellus) Hindgut Microbiota in Response to an Extreme Dietary Shift
Cited by: 68
Author(s): Yao Tong Hao, Shan Wu, Fan Xiong, Ngoc Tuan Tran, Ivan Jakovlić, Hong Zou, Wen Xiang Li, Gui Tang Wang
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.01796

Biases in Prokaryotic Community Amplicon Sequencing Affected by DNA Extraction Methods in Both Saline and Non-saline Soil
Cited by: 12
Author(s): Kehui Xie, Yong Deng, Xuze Zhang, Xueting Wang, Guangbo Kang, Liang Bai, He Huang
Software Mentions: 2
Published: over 6 years ago

10.1186/s12915-019-0702-0

Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
Cited by: 18
Author(s): Isidro Álvarez‐Escribano, Christoph Sasse, Jin Woo Bok, Hyunsoo Na, Mojgan Amirebrahimi, Anna Lipzen, Wendy Schackwitz, Joel Martin, Kerrie Barry, Gabriel Gutiérrez, Sara Cea-Sánchez, Ana T. Marcos, Igor V. Grigoriev, Nancy P. Keller, Gerhard H. Braus, David Cánovas
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2018.03275

The Influence of Bt Maize Cultivation on Communities of Arbuscular Mycorrhizal Fungi Revealed by MiSeq Sequencing
Cited by: 15
Author(s): Huilan Zeng, Wang Zhong, Fengxiao Tan, Yinghua Shu, Ying Feng, Jianwu Wang
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2018.00279

Cultivation-Independent and Cultivation-Dependent Analysis of Microbes in the Shallow-Sea Hydrothermal System Off Kueishantao Island, Taiwan: Unmasking Heterotrophic Bacterial Diversity and Functional Capacity
Cited by: 23
Author(s): Kai Tang, Yao Zhang, Dan Lin, Han Yu, Chen‐Tung Arthur Chen, Deli Wang, Yu‐Shih Lin, Jia Sun, Qiang Zheng, Nianzhi Jiao
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2016.01782

Distinct Factors Shape Aquatic and Sedimentary Microbial Community Structures in the Lakes of Western China
Cited by: 47
Author(s): Jian Yang, Hongchen Jiang, Geng Wu, Wen Li, Guojing Zhang
Software Mentions: 2
Published: about 8 years ago

10.3390/microorganisms9020355

Landscape Setting Drives the Microbial Eukaryotic Community Structure in Four Swedish Mountain Lakes over the Holocene
Cited by: 4
Author(s): Eric Capo, Sofia Ninnes, Isabelle Domaizon, Stefan Bertilsson, Christian Bigler, Xiaoru Wang, Richard Bindler, Johan Rydberg
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12915-015-0192-7

Sympatric ecological divergence associated with a color polymorphism
Cited by: 27
Author(s): Henrik Kusche, Kathryn R. Elmer, Axel Meyer
Software Mentions: 2
Published: about 9 years ago

10.1186/s13568-021-01182-z

Soil fertilization affects the abundance and distribution of carbon and nitrogen cycling genes in the maize rhizosphere
Cited by: 20
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: almost 4 years ago

10.3390/microorganisms7120682

Temperature Effects on Methanogenesis and Sulfidogenesis during Anaerobic Digestion of Sulfur-Rich Macroalgal Biomass in Sequencing Batch Reactors
Cited by: 17
Author(s): Heejung Jung, Jaai Kim, Changsoo Lee
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2015.00379

Cropping systems modulate the rate and magnitude of soil microbial autotrophic CO2 fixation in soil
Cited by: 39
Author(s): Xin Wu, Tida Ge, Wei Wang, Yuan Huang, Carl‐Eric Wegner, Zhenke Zhu, Andrew S. Whiteley, Jinshui Wu
Software Mentions: 2
Published: over 9 years ago

10.3390/microorganisms9071373

Can Potato Plants Be Colonized with the Fungi Metarhizium and Beauveria under Their Natural Load in Agrosystems?
Cited by: 15
Author(s): Maksim Tyurin, Мarsel R. Kabilov, Н. В. Смирнова, Oksana G. Tomilova, O. N. Yaroslavtseva, Tatyana Alikina, В. В. Глупов, V. Yu. Kryukov
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2020.00012

The Role of Microbial Mats in the Removal of Hexavalent Chromium and Associated Shifts in Their Bacterial Community Composition
Cited by: 11
Author(s): Raeid M. M. Abed, Mary Shanti, T. S. Muthukrishnan, Zayana Al-Riyami, Bernhard Pracejus, Daniel Moraetis
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2018.00495

Host Age Affects the Development of Southern Catfish Gut Bacterial Community Divergent From That in the Food and Rearing Water
Cited by: 47
Author(s): Zhimin Zhang, Dapeng Li, Mohamed M. Refaey, Weigang Xu, Rong Tang, Li Li
Software Mentions: 2
Published: over 6 years ago

10.1002/ece3.6762

Genetic diversity, population structure, and gene flow analysis of lowland bamboo [<i>Oxytenanthera abyssinica</i> (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2202-13-68

Somato-dendritic morphology and dendritic signal transfer properties differentiate between fore- and hindlimb innervating motoneurons in the frog Rana esculenta
Cited by: 0
Author(s): András Stelescu, János Sümegi, Ildikó Wéber, András Birinyi, Ervin Wolf
Software Mentions: 2
Published: over 12 years ago

10.3390/microorganisms7020033

Cave Drip Water-Related Samples as a Natural Environment for Aromatic Hydrocarbon-Degrading Bacteria
Cited by: 15
Author(s): Eric de Lima Silva Marques, Gislaine S. Silva, João Carlos Teixeira Dias, Eduardo Gross, Moara Silva Costa, Rachel Passos Rezende
Software Mentions: 2
Published: almost 6 years ago

10.3390/microorganisms8060938

Sex-Specific Associations between Gut Prevotellaceae and Host Genetics on Adiposity
Cited by: 26
Author(s): Amelia Marti, José Ignacio Riezu-Boj, Elizabeth Guruceaga, Fermı́n I. Milagro, J. Alfredo Martínéz
Software Mentions: 2
Published: over 4 years ago

10.1186/s12859-019-3153-2

3-Dimensional facial expression recognition in human using multi-points warping
Cited by: 11
Author(s): Olalekan Agbolade, Azree Nazri, Razali Yaakob, Abdul Ghani, Yoke Kqueen Cheah
Software Mentions: 2
Published: almost 5 years ago

10.1186/1471-2180-12-140

Diversity and dynamics of Archaea in an activated sludge wastewater treatment plant
Cited by: 41
Author(s): Nils Johan Fredriksson, Malte Hermansson, Britt‐Marie Wilén
Software Mentions: 2
Published: almost 13 years ago

10.1002/ece3.7416

Changes in the Montagu’s Harrier Circus pygargus diet in Eastern Poland across decades promote insects and reptilians, but not birds and rodents
Cited by: 2
Author(s): Ignacy Kitowski, Dariusz Jakubas, Paweł Mirski, Grzegorz Pitucha, Kornelia Markowska
Software Mentions: 2
Published: over 3 years ago

10.1186/s12866-020-01923-3

Metagenomics revealing molecular profiling of community structure and metabolic pathways in natural hot springs of the Sikkim Himalaya
Cited by: 29
Author(s): Nitish Sharma, Jitesh Kumar, Md Minhajul Abedin, Dinabandhu Sahoo, Ashok Pandey, Amit Kumar, Sudhir P. Singh
Software Mentions: 2
Published: over 4 years ago

10.3390/microorganisms8101484

Seasonality in Spatial Turnover of Bacterioplankton Along an Ecological Gradient in the East China Sea: Biogeographic Patterns, Processes and Drivers
Cited by: 7
Author(s): Hanjing Hu, Jiaying He, Huizhen Yan, Dandi Hou, Demin Zhang, Lian Liu, Kai Wang
Software Mentions: 2
Published: about 4 years ago

10.3390/microorganisms9071419

Metagenomic Insight into the Community Structure of Maize-Rhizosphere Bacteria as Predicted by Different Environmental Factors and Their Functioning within Plant Proximity
Cited by: 12
Author(s): Saheed Adekunle Akinola, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 3 years ago

10.1002/ece3.6631

DNA barcode assessment and population structure of aphidophagous hoverfly <i>Sphaerophoria scripta</i>: Implications for conservation biological control
Cited by: 4
Author(s): Nemanja Gojković, Ljubinka Francuski, Jasmina Ludoški, Vesna Milankov
Software Mentions: 2
Published: over 4 years ago

10.3390/microorganisms9051088

Metagenomics Analysis Reveals an Extraordinary Inner Bacterial Diversity in Anisakids (Nematoda: Anisakidae) L3 Larvae
Cited by: 4
Author(s): Susana C. Arcos, Felipe Lira, Lee Robertson, Miguel Ángel González Rebollo, Noelia Carballeda-Sangiao, Isabel Sánchez‐Alonso, Laura Zamorano, Mercedes Careche, Yolanda Jiménez‐Ruiz, Ricardo Ramos, Carlos Lloréns, Miguel González‐Muñoz, Antonio Oliver, José Luis Martínez, Andrés Navas
Software Mentions: 2
Published: over 3 years ago

10.3390/ani11020367

Establishing Cell Lines from Fresh or Cryopreserved Tissue from the Great Crested Newt (Triturus cristatus): A Preliminary Protocol
Cited by: 4
Author(s): Julie Strand, Henrik Callesen, Cino Pertoldi, Stig Purup
Software Mentions: 2
Published: almost 4 years ago

10.1002/ece3.4998

High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary
Cited by: 9
Author(s): Angelina Nunziata, Laura Benedetti, Ilaria Marchioni, C. Cervelli
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms8060908

Future Climate Significantly Alters Fungal Plant Pathogen Dynamics during the Early Phase of Wheat Litter Decomposition
Cited by: 17
Author(s): Sara Fareed Mohamed Wahdan, Shakhawat Hossen, Benjawan Tanunchai, Martin Schädler, François Buscot, Witoon Purahong
Software Mentions: 2
Published: over 4 years ago

10.1002/ece3.2714

Does thinning-induced gap size result in altered soil microbial community in pine plantation in eastern Tibetan Plateau?
Cited by: 31
Author(s): Bing Yang, Xiaoyun Pang, Bin Hu, Weikai Bao, Guangming Tian
Software Mentions: 2
Published: over 7 years ago

10.1186/s12870-021-03037-y

Transcriptomic resources for prairie grass (Bromus catharticus): expressed transcripts, tissue-specific genes, and identification and validation of EST-SSR markers
Cited by: 11
Author(s): Ming Sun, Zhixiao Dong, Jian Yang, Wen Bing Wu, Chenglin Zhang, Jianbo Zhang, Junlong Zhao, Yi Xiong, Shangang Jia, Xiao Ma
Software Mentions: 2
Published: over 3 years ago

Projects: bioconductor: PAST

Papers Mentioning PAST 2,336