Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: MSstatsTMT
https://packages.ecosyste.ms/registries/bioconductor.org/packages/MSstatsTMT
Protein Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
1 version
Latest release: about 1 year ago
2 dependent packages
13,402 downloads total
Papers Mentioning MSstatsTMT 5
10.1074/mcp.RA120.002105
MSstatsTMT: Statistical Detection of Differentially Abundant Proteins in Experiments with Isobaric Labeling and Multiple MixturesCited by: 70
Author(s): Ting Huang, Meena Choi, Manuel Tzouros, Sabrina Golling, Nikhil J. Pandya, Balázs Bánfai, Tom Dunkley, Olga Vitek
Software Mentions: 7
Published: about 4 years ago
10.7554/eLife.61590
Genetic disruption of WASHC4 drives endo-lysosomal dysfunction and cognitive-movement impairments in mice and humansCited by: 23
Author(s): Jamie L Courtland, Tyler Wa Bradshaw, Greg Waitt, Erik J. Soderblom, Tricia Ho, Anna Rajab, Ricardo Vancini, Il Hwan Kim, Scott H. Soderling
Software Mentions: 6
Published: almost 4 years ago
10.7554/eLife.62320
Multiplexed proteomics of autophagy-deficient murine macrophages reveals enhanced antimicrobial immunity via the oxidative stress responseCited by: 9
Author(s): Timurs Maculins, Erik Verschueren, Trent Hinkle, Meena Choi, Patrick Chang, Cécile Chalouni, Shilpa Rao, Youngsu Kwon, Junghyun Lim, Anand Kumar Katakam, Ryan C. Kunz, Brian K. Erickson, Ting Huang, Tsung-Heng Tsai, Olga Vitek, Mike Reichelt, Yasin Şenbabaoğlu, Brent McKenzie, John R. Rohde, Ivan Đikić, Donald S. Kirkpatrick, Aditya Murthy
Software Mentions: 4
Published: over 3 years ago
10.1038/s42003-020-01384-4
Multiplexed quantitative proteomics provides mechanistic cues for malaria severity and complexityCited by: 15
Author(s): Vipin Kumar, Ray S, Shalini Aggarwal, Deeptarup Biswas, Manali Jadhav, Radha Yadav, Sanjeev Sabnis, Soumaditya Banerjee, Arunansu Talukdar, Sanjay Kumar Kochar, Suvin Shetty, Kunal Sehgal, Swati Patankar, Sanjeeva Srivastava
Software Mentions: 3
Published: about 4 years ago
10.3390/ijms221910556
Lipidomic and Proteomic Alterations Induced by Even and Odd Medium-Chain Fatty Acids on Fibroblasts of Long-Chain Fatty Acid Oxidation DisordersCited by: 4
Author(s): Khaled I. Alatibi, Stefan Tholen, Zeinab Wehbe, Judith Hagenbuchner, Daniela Karall, Michael J. Ausserlechner, Oliver Schilling, Sarah C. Grünert, Jerry Vockley, Sara Tucci
Software Mentions: 2
Published: about 3 years ago