Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: LEA

https://packages.ecosyste.ms/registries/bioconductor.org/packages/LEA

LEA: an R package for Landscape and Ecological Association Studies
1 version
Latest release: about 1 year ago
47,834 downloads total

Papers Mentioning LEA 139

10.1093/gigascience/giz028
Rice Galaxy: an open resource for plant science
Cited by: 13
Author(s): Venice Margarette Juanillas, Alexis Dereeper, Nicolas Beaume, Gaëtan Droc, Joshua Gregor A. Dizon, J. Mendoza, Jon Peter Perdon, Locedie Mansueto, Lindsay R. Triplett, Jillian M. Lang, Gabriel Zhou, Kunalan Ratharanjan, Beth Plale, Jason Haga, Jan E. Leach, Manuel Ruiz, Michael J. Thomson, Nickolai Alexandrov, Pierre Larmande, Tobias Kretzschmar, Ramil Mauleon
Software Mentions: 18
Published: over 5 years ago
10.7717/peerj.11534
<i>AlleleShift:</i> an R package to predict and visualize population-level changes in allele frequencies in response to climate change
Cited by: 5
Author(s): Roeland Kindt
Software Mentions: 12
Published: over 3 years ago
10.1038/s41437-021-00418-9
Population genomics and conservation management of a declining tropical rodent
Cited by: 9
Author(s): Brenton von Takach, Cara E. Penton, Brett P. Murphy, Ian J. Radford, Hugh F. Davies, Brydie M. Hill, Sam C. Banks
Software Mentions: 9
Published: over 3 years ago
10.1371/journal.pone.0241025
Genome-wide SNP analysis to assess the genetic population structure and diversity of Acrocomia species
Cited by: 13
Author(s): Brenda Gabriela Diaz, Maria Imaculada Zucchi, Alessandro Alves‐Pereira, Caléo Panhoca de Almeida, Aline Costa Lima Moraes, Suelen Alves Vianna, Joaquim Adelino de Azevedo-Filho, Carlos Augusto Colombo
Software Mentions: 9
Published: over 3 years ago
10.3390/ijms161226230
MicroRNA-Target Network Inference and Local Network Enrichment Analysis Identify Two microRNA Clusters with Distinct Functions in Head and Neck Squamous Cell Carcinoma
Cited by: 12
Author(s): Steffen Sass, Adriana Pitea, Kristian Unger, Julia Heß, Nikola S. Mueller, Fabian J. Theis
Software Mentions: 9
Published: almost 9 years ago
10.1002/ece3.5070
Next‐generation phylogeography of the cockle<i>Cerastoderma glaucum</i>: Highly heterogeneous genetic differentiation in a lagoon species
Cited by: 10
Author(s): Ludmila Sromek, Didier Forcioli, Rafał Lasota, Paola Furla, Maciej Wołowicz
Software Mentions: 9
Published: over 5 years ago
10.1111/eva.12932
Fine‐scale seascape genomics of an exploited marine species, the common cockle <i>Cerastoderma edule</i>, using a multimodelling approach
Cited by: 25
Author(s): Ilaria Coscia, Sophie B. Wilmes, Joseph E. Ironside, Alice Goward‐Brown, Enda O’Dea, Shelagh K. Malham, Allan D. McDevitt, Peter Robins
Software Mentions: 8
Published: over 4 years ago
10.1002/ece3.5734
Predicting the success of an invader: Niche shift versus niche conservatism
Cited by: 21
Author(s): Stéphanie Sherpa, Maya Guéguen, Julien Renaud, Michaël G. B. Blum, Thierry Gaude, Frédéric Laporte, Mustafa Akiner, Bülent Alten, Carles Aranda, Hélène Barre‐Cardi, Romeo Bellini, Mikel Bengoa Paulis, Xiaoguang Chen, Roger Eritja, Eleonora Flacio, Cipriano Foxi, Intan H. Ishak, Katja Kalan, Shinji Kasai, Fabrizio Montarsi, I. Pajović, Dušan Petrić, Rosa Termine, Nataša Turić, Gonzalo M. Vazquez‐Prokopec, Enkelejda Velo, Goran Vignjević, Xiaohong Zhou, Laurence Després
Software Mentions: 8
Published: about 5 years ago
10.3390/microorganisms7110492
Genetic and Phenotypic Characterisation of a Saccharomyces cerevisiae Population of ‘Merwah’ White Wine
Cited by: 8
Author(s): Nadine Feghali, Warren Albertin, Edouard Tabet, Ziad Rizk, Angela Bianco, Giacomo Zara, Isabelle Masneuf‐Pomarède, Marilena Budroni
Software Mentions: 7
Published: about 5 years ago
10.3390/genes12050637
Insight into the Genetic Population Structure of Wild Red Foxes in Poland Reveals Low Risk of Genetic Introgression from Escaped Farm Red Foxes
Cited by: 2
Author(s): Heliodor Wierzbicki, Magdalena Zatoń‐Dobrowolska, Anna Mucha, Magdalena Moska
Software Mentions: 7
Published: over 3 years ago
10.1038/s41598-020-67397-5
Genome-wide patterns of differentiation over space and time in the Queensland fruit fly
Cited by: 14
Author(s): Ángel David Popa-Báez, Renee A. Catullo, Siu Fai Lee, Heng Lin Yeap, Roslyn Mourant, Michael Frommer, J. A. Sved, Emilie Cameron, Owain Edwards, Phillip W. Taylor, John G. Oakeshott
Software Mentions: 7
Published: over 4 years ago
10.1093/aobpla/plab049
Genetic diversity and population structure of a global invader Mayweed chamomile (<i>Anthemis cotula</i>): management implications
Cited by: 2
Author(s): Subodh Adhikari, Samuel R. Revolinski, Sanford D. Eigenbrode, Ian C. Burke
Software Mentions: 7
Published: over 3 years ago
10.1002/ece3.6978
Implications of genetic heterogeneity for plant translocation during ecological restoration
Cited by: 2
Author(s): Taylor M. Crow, C. Alex Buerkle, Daniel E. Runcie, Kristina M. Hufford
Software Mentions: 6
Published: almost 4 years ago
10.1186/s12864-019-5453-3
Genome-wide signatures of local adaptation among seven stoneflies species along a nationwide latitudinal gradient in Japan
Cited by: 15
Author(s): Maribet Gamboa, Kozo Watanabe
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pntd.0006698
Population genomics of Culiseta melanura, the principal vector of Eastern equine encephalitis virus in the United States
Cited by: 5
Author(s): John Soghigian, Theodore G. Andreadis, Goudarz Molaei
Software Mentions: 6
Published: over 6 years ago
10.1002/ece3.6378
Long‐lived marine species may be resilient to environmental variability through a temporal portfolio effect
Cited by: 1
Author(s): Jacek Maselko, Kimberly R. Andrews, Paul A. Hohenlohe
Software Mentions: 6
Published: over 4 years ago
10.1111/eva.13291
A comparison of microsatellites and genome‐wide SNPs for the detection of admixture brings the first molecular evidence for hybridization between <i>Mustela eversmanii</i> and <i>M. putorius</i> (Mustelidae, Carnivora)
Cited by: 11
Author(s): Lajos Szatmári, Tamás Cserkész, Levente Laczkó, József Lanszki, Cino Pertoldi, Alexei V. Abramov, Morten Elmeros, Barnabás Ottlecz, Zsolt Hegyeli, Gábor Sramkó
Software Mentions: 6
Published: about 3 years ago
10.3389/fpls.2018.01148
The Contribution of Neutral and Environmentally Dependent Processes in Driving Population and Lineage Divergence in Taiwania (Taiwania cryptomerioides)
Cited by: 8
Author(s): Yi Shao Li, Chih-Hsiung Chang, Chun‐Neng Wang, Philip Thomas, Jeng Der Chung, Shih Ying Hwang
Software Mentions: 6
Published: over 6 years ago
10.1002/ece3.5961
Do different rates of gene flow underlie variation in phenotypic and phenological clines in a montane grasshopper community?
Cited by: 4
Author(s): R. O. Slatyer, Sean D. Schoville, César R. Nufio, Lauren B. Buckley
Software Mentions: 6
Published: almost 5 years ago
10.3390/biology10080734
Genetic Diversity and Population Differentiation of Kashgarian Loach (Triplophysa yarkandensis) in Xinjiang Tarim River Basin
Cited by: 4
Author(s): Xiaoyun Zhou, Shaokui Yi, Wenhao Zhao, Qiong Zhou, Jianzhong Shen, Dapeng Li, Bin Huo, Rong Tang
Software Mentions: 6
Published: over 3 years ago
10.1534/g3.117.300152
Heterogeneous Patterns of Genetic Diversity and Differentiation in European and Siberian Chiffchaff (<i>Phylloscopus collybita abietinus/P. tristis</i>)
Cited by: 4
Author(s): Venkat Talla, Faheema Kalsoom, Daria Shipilina, И. М. Марова, Niclas Backström
Software Mentions: 6
Published: almost 7 years ago
10.3389/fpls.2018.01322
Potential of Genome-Wide Studies in Unrelated Plus Trees of a Coniferous Species, Cryptomeria japonica (Japanese Cedar)
Cited by: 13
Author(s): Yuichiro Hiraoka, Eitaro Fukatsu, Kentaro Mishima, Tomonori Hirao, Kenjiro Teshima, Miho Tamura, Miyoko Tsubomura, Taiichi Iki, Masayuki Kurita, Makoto Takahashi, Atsushi Watanabe
Software Mentions: 5
Published: about 6 years ago
10.1111/eva.13030
Contrasted patterns of local adaptation to climate change across the range of an evergreen oak, <i>Quercus aquifolioides</i>
Cited by: 25
Author(s): Fang Du, Tianrui Wang, Yuyao Wang, S. Ueno, Guillaume de Lafontaine
Software Mentions: 5
Published: over 4 years ago
10.1111/eva.12794
Landscape genomics to the rescue of a tropical bee threatened by habitat loss and climate change
Cited by: 37
Author(s): Rodolfo Jaffé, Jamille Costa Veiga, Nathaniel S. Pope, Éder Cristian Malta de Lanes, Carolina da Silva Carvalho, Ronnie Alves, Sónia C. S. Andrade, Maria Cristina Arias, Vanessa Bonatti, Alysson Massote Carvalho, Marina S. de Castro, Felipe Andrés León Contrera, Tiago Maurício Francoy, Breno Magalhães Freitas, Tereza Cristina Giannini, Michael Hrncir, Celso Feitosa Martins, Guilherme de Oliveira, Antônio Mauro Saraiva, Bruno de Almeida Souza, Vera Lúcia Imperatriz-Fonseca
Software Mentions: 5
Published: over 5 years ago
10.1111/eva.12647
Population genomics of the introduced and cultivated Pacific kelp<i>Undaria pinnatifida</i>: Marinas-not farms-drive regional connectivity and establishment in natural rocky reefs
Cited by: 43
Author(s): Jaromir Guzinski, Marion Ballenghien, Claire Daguin‐Thiébaut, Laurent Lévêque, Frédérique Viard
Software Mentions: 5
Published: over 6 years ago
10.1111/1755-0998.12694
An integrated framework to identify wildlife populations under threat from climate change
Cited by: 64
Author(s): Orly Razgour, John B. Taggart, Stéphanie Manel, Javier Juste, Carlos Ibáñez, Hugo Rebelo, Antton Alberdi, Gareth Jones, Kirsty Park
Software Mentions: 5
Published: over 7 years ago
10.1111/eva.13219
Whole genome genotyping reveals discrete genetic diversity in north‐east Atlantic maerl beds
Cited by: 3
Author(s): Tom L. Jenkins, Marie‐Laure Guillemin, Cornelia Simon-Nutbrown, Heidi L. Burdett, Jamie R. Stevens, Viviana Peña
Software Mentions: 5
Published: over 3 years ago
10.1111/eva.12907
<i>Rattus</i>population genomics across the Haida Gwaii archipelago provides a framework for guiding invasive species management
Cited by: 11
Author(s): Bryson M. F. Sjodin, Robyn L. Irvine, Adam T. Ford, Gregg R. Howald, Michael A. Russello
Software Mentions: 4
Published: almost 5 years ago
10.1111/eva.12990
Genomic population structure of Striped Bass (<i>Morone saxatilis</i>) from the Gulf of St. Lawrence to Cape Fear River
Cited by: 12
Author(s): Nathalie M. LeBlanc, Benjamin I. Gahagan, Samuel N. Andrews, Trevor S. Avery, Gregory Neils Puncher, Benjamin J. Reading, Colin F. Buhariwalla, R. Allen Curry, Andrew R. Whiteley, Scott A. Pavey
Software Mentions: 4
Published: over 4 years ago
10.3389/fgene.2021.642504
Genetic Diversity and Demographic History of the Shaggy Soft-Haired Mouse Abrothrix hirta (Cricetidae; Abrotrichini)
Cited by: 8
Author(s): Lourdes Valdez, Guillermo D’Elı́a
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-018-22580-7
Brettanomyces bruxellensis population survey reveals a diploid-triploid complex structured according to substrate of isolation and geographical distribution
Cited by: 70
Author(s): Marta Avramova, Alice Cibrario, Emilien Peltier, Monika Coton, Emmanuel Coton, Joseph Schacherer, Giuseppe Spano, Vittorio Capozzi, Giuseppe Blaiotta, Franck Salin, Marguerite Dols‐Lafargue, Paul R. Grbin, Chris Curtin, Warren Albertin, Isabelle Masneuf‐Pomarède
Software Mentions: 4
Published: over 6 years ago
10.1186/s13071-018-2933-2
Aedes aegypti in the Black Sea: recent introduction or ancient remnant?
Cited by: 37
Author(s): Panayiota Kotsakiozi, Andrea Gloria‐Soria, Francis Schaffner, Vincent Robert, Jeffrey R. Powell
Software Mentions: 4
Published: over 6 years ago
10.3390/plants10081572
Genome-Environment Association Analysis for Bio-Climatic Variables in Common Bean (Phaseolus vulgaris L.) from Brazil
Cited by: 3
Author(s): Júlio César Ferreira Elias, Maria Celeste Gonçalves‐Vidigal, Andrea Ariani, Giseli Valentini, Maria da Conceição Martiniano-Souza, Mariana Vaz Bisneta, Paul Gepts
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pgen.1008348
Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon
Cited by: 35
Author(s): Quentin Rougemont, Jean‐Sébastien Moore, Thibault Leroy, Éric Normandeau, Eric B. Rondeau, Ruth E. Withler, Donald M. Van Doornik, Penelope A. Crane, Kerry A. Naish, John Carlos Garza, Terry D. Beacham, Ben F. Koop, Louis Bernatchez
Software Mentions: 4
Published: about 4 years ago
10.1186/s12864-020-07198-2
GWAS unveils features between early- and late-flowering pearl millets
Cited by: 10
Author(s): Oumar Diack, Ghislain Kanfany, Mame Codou Guèye, Ousmane Sy, Amadou Fofana, Hamidou Tall, Desalegn D. Serba, Leïla Zekraoui, Cécile Berthouly‐Salazar, Yves Vigouroux, Diaga Diouf, Ndjido Ardo Kane
Software Mentions: 4
Published: about 4 years ago
10.1186/s12983-019-0316-y
Combining morphological and genomic evidence to resolve species diversity and study speciation processes of the Pallenopsis patagonica (Pycnogonida) species complex
Cited by: 11
Author(s): Jana S. Dömel, Till‐Hendrik Macher, Lars Dietz, sabrina e duncan, Christoph Mayer, Andrey Rozenberg, Katherine Wolcott, Florian Leese, Roland R. Melzer
Software Mentions: 4
Published: about 5 years ago
10.1038/s41598-021-85735-z
The phylogeographic history of Krascheninnikovia reflects the development of dry steppes and semi-deserts in Eurasia
Cited by: 9
Author(s): Anna Seidl, Karin Tremetsberger, Simon Pfanzelt, Frank R. Blattner, Barbara Neuffer, Nikolai Friesen, Herbert Hurka, А. И. Шмаков, Batlai Oyuntsetseg, Anže Žerdoner Čalasan, Polina V. Vesselova, Karl‐Georg Bernhardt
Software Mentions: 4
Published: over 3 years ago
10.1002/ece3.5950
Continent‐wide population genomic structure and phylogeography of North America’s most destructive conifer defoliator, the spruce budworm (<i>Choristoneura fumiferana</i>)
Cited by: 19
Author(s): Lisa M. Lumley, Esther Pouliot, Jérôme Laroche, Brian Boyle, Bryan M. T. Brunet, Roger C. Levesque, Felix A. H. Sperling, Michel Cusson
Software Mentions: 4
Published: almost 5 years ago
10.1002/ece3.7322
Local environment‐driven adaptive evolution in a marine invasive ascidian (<i>Molgula manhattensis</i>)
Cited by: 10
Author(s): Yiyong Chen, Yangchun Gao, Xuena Huang, Shiguo Li, Aibin Zhan
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-020-70798-1
Signatures of local adaptation in the spatial genetic structure of the ascidian Pyura chilensis along the southeast Pacific coast
Cited by: 9
Author(s): Nicolás I. Segovia, Claudio A. González‐Wevar, Pilar A. Haye
Software Mentions: 4
Published: about 4 years ago
10.1186/s12864-018-4579-z
Combining six genome scan methods to detect candidate genes to salinity in the Mediterranean striped red mullet (Mullus surmuletus)
Cited by: 42
Author(s): Alicia Dalongeville, Laura Benestan, David Mouillot, Stéphane Lobreaux, StĂŠphanie Manel
Software Mentions: 3
Published: over 6 years ago
10.1093/aobpla/plaa003
Range-wide neutral and adaptive genetic structure of an endemic herb from Amazonian Savannas
Cited by: 17
Author(s): Amanda R. Silva, Luciana C. Resende‐Moreira, Carolina da Silva Carvalho, Éder Cristian Malta de Lanes, Mabel Ortiz-Vera, Pedro Lage Viana, Rodolfo Jaffé
Software Mentions: 3
Published: almost 5 years ago
10.1038/s41598-017-05256-6
Postglacial range expansion and the role of ecological factors in driving adaptive evolution of Musa basjoo var. formosana
Cited by: 9
Author(s): Jui Hung Chen, Chang-Jen Huang, Yu Long Lai, Chih-Hsiung Chang, Pei Chun Liao, Shih Ying Hwang, Chih Wen Sun
Software Mentions: 3
Published: over 7 years ago
10.1186/s13071-020-04278-w
Genetic structure of the mosquito Aedes aegypti in local forest and domestic habitats in Gabon and Kenya
Cited by: 12
Author(s): Siyang Xia, Luciano V. Cosme, Joel Lutomiah, Rosemary Sang, Marc F. Ngangue, Nil Rahola, Diégo Ayala, Jeffrey R. Powell
Software Mentions: 3
Published: over 4 years ago
10.1111/mec.15590
Genetic evidence for the origin of <i>Aedes aegypti</i> , the yellow fever mosquito, in the southwestern Indian Ocean
Cited by: 38
Author(s): John Soghigian, Andrea Gloria‐Soria, Vincent Robert, Gilbert Le Goff, Anna‐Bella Failloux, Jeffrey R. Powell
Software Mentions: 3
Published: about 4 years ago
10.3389/fgene.2020.00218
Comparing the Performance of Microsatellites and RADseq in Population Genetic Studies: Analysis of Data for Pike (Esox lucius) and a Synthesis of Previous Studies
Cited by: 64
Author(s): Johanna Sunde, Yeşerin Yıldırım, Petter Tibblin, Anders Forsman
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0192386
Geographical and environmental determinants of the genetic structure of wild barley in southeastern Anatolia
Cited by: 6
Author(s): Reza Pournosrat, Selma Kaya, Salar Shaaf, Benjamin Kilian, Hakan Özkan
Software Mentions: 3
Published: almost 7 years ago
10.3389/fpls.2018.00532
Landscape Genomic Conservation Assessment of a Narrow-Endemic and a Widespread Morning Glory From Amazonian Savannas
Cited by: 41
Author(s): Éder Cristian Malta de Lanes, Nathaniel S. Pope, Ronnie Alves, Nelson M. Carvalho Filho, Tereza Cristina Giannini, Ana María Giulietti, Vera Lúcia Imperatriz-Fonseca, Waléria Pereira Monteiro, Guilherme Oliveira, Amanda R. Silva, José Oswaldo Siqueira, Pedro Walfir M. Souza-Filho, Santelmo Vasconcelos, Rodolfo Jaffé
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pone.0137671
Integrating mRNA and miRNA Weighted Gene Co-Expression Networks with eQTLs in the Nucleus Accumbens of Subjects with Alcohol Dependence
Cited by: 70
Author(s): Mohammed Mamdani, Vernell Williamson, Gowon O. McMichael, Tana Blevins, Fazil Alıev, Amy Adkins, Laura M. Hack, Tim B. Bigdeli, Andrew D. van der Vaart, Bradley Todd Web, Silviu‐Alin Bacanu, Gursharan Kalsi, Kenneth S. Kendler, Michael F. Miles, Danielle M. Dick, Brien P. Riley, Catherine I. Dumur, Vladimir I. Vladimirov
Software Mentions: 3
Published: about 9 years ago
10.3389/fpls.2020.583738
Identification of New Leaf Rust Resistance Loci in Wheat and Wild Relatives by Array-Based SNP Genotyping and Association Genetics
Cited by: 26
Author(s): Fizza Fatima, Brent D. McCallum, Curtis Pozniak, Colin W. Hiebert, Curt A. McCartney, George Fedak, Frank M. You, Sylvie Cloutier
Software Mentions: 3
Published: about 4 years ago
10.1186/s12862-021-01920-8
Genetic relationships between sympatric and allopatric Coregonus ciscoes in North and Central Europe
Cited by: 3
Author(s): Thomas Mehner, Stefan Palm, Bo Delling, Juha Karjalainen, Jolanta Kiełpińska, Asja Vogt, Joerg Freyhof
Software Mentions: 3
Published: about 3 years ago
10.1186/s12864-021-07907-5
Genomic signatures of natural selection at phenology-related genes in a widely distributed tree species Fagus sylvatica L
Cited by: 5
Author(s): Joanna Meger, Bartosz Ulaszewski, Jarosław Burczyk
Software Mentions: 3
Published: over 3 years ago
10.3389/fpls.2018.00092
Adaptive Genetic Divergence Despite Significant Isolation-by-Distance in Populations of Taiwan Cow-Tail Fir (Keteleeria davidiana var. formosana)
Cited by: 20
Author(s): Kai Ming Shih, Chih-Hsiung Chang, Jeng Der Chung, Yu Chung Chiang, Shih Ying Hwang
Software Mentions: 3
Published: almost 7 years ago
10.1002/ece3.7429
Rivers, not refugia, drove diversification in arboreal, sub‐Saharan African snakes
Cited by: 10
Author(s): Kaitlin E. Allen, Eli Greenbaum, Paul M Hime, Walter Paulin Tapondjou N., Viktoria V. Sterkhova, Chifundera Kusamba, Mark‐Oliver Rödel, Johannes Penner, A. Townsend Peterson, Rafe M. Brown
Software Mentions: 3
Published: over 3 years ago
10.1002/ece3.2550
The challenge of separating signatures of local adaptation from those of isolation by distance and colonization history: The case of two white pines
Cited by: 69
Author(s): Simon Nadeau, Patrick G. Meirmans, Sally N. Aitken, Kermit Ritland, Nathalie Isabel
Software Mentions: 3
Published: about 8 years ago
10.3389/fgene.2020.580630
Ecological Factors Generally Not Altitude Related Played Main Roles in Driving Potential Adaptive Evolution at Elevational Range Margin Populations of Taiwan Incense Cedar (Calocedrus formosana)
Cited by: 4
Author(s): Wei Ming Chien, Chih-Hsiung Chang, Yu Chung Chiang, Shih Ying Hwang
Software Mentions: 3
Published: about 4 years ago
10.3389/fgene.2019.01101
Habitat Loss Does Not Always Entail Negative Genetic Consequences
Cited by: 26
Author(s): Carolina da Silva Carvalho, Éder Cristian Malta de Lanes, Amanda R. Silva, Cecílio Fróis Caldeira, Nelson Carvalho-Filho, Markus Gastauer, Vera Lúcia Imperatriz-Fonseca, Wilson Nascimento Júnior, Guilherme Oliveira, José Oswaldo Siqueira, Pedro Lage Viana, Rodolfo Jaffé
Software Mentions: 3
Published: about 5 years ago
10.1002/evl3.90
Landscape permeability and individual variation in a dispersal-linked gene jointly determine genetic structure in the Glanville fritillary butterfly
Cited by: 16
Author(s): Michelle F. DiLeo, Arild Husby, Marjo Saastamoinen
Software Mentions: 3
Published: almost 6 years ago
10.3389/fgene.2019.00742
Testing the Effect of Mountain Ranges as a Physical Barrier to Current Gene Flow and Environmentally Dependent Adaptive Divergence in Cunninghamia konishii (Cupressaceae)
Cited by: 10
Author(s): Yi Shao Li, Kai Ming Shih, Chih-Hsiung Chang, Jeng Der Chung, Shih Ying Hwang
Software Mentions: 3
Published: over 5 years ago
10.1002/ece3.6641
Distribution of genetic variation underlying adult migration timing in steelhead of the Columbia River basin
Cited by: 12
Author(s): Erin E. Collins, John S. Hargrove, Thomas A. Delomas, Shawn R. Narum
Software Mentions: 3
Published: over 4 years ago
10.1186/s13048-020-00696-7
Transcriptomics of cumulus cells – a window into oocyte maturation in humans
Cited by: 16
Author(s): Brandon A. Wyse, Noga Fuchs Weizman, Seth Kadish, Hanna Bałakier, Mugundhine Sangaralingam, Clifford L. Librach
Software Mentions: 3
Published: over 4 years ago
10.1186/s13072-019-0296-3
Accurate ethnicity prediction from placental DNA methylation data
Cited by: 39
Author(s): Victor Yuan, Emily Price, Giulia Gobbo, Sara Mostafavi, Brian Cox, Alexandra M. Binder, Karin B. Michels, Carmen J. Marsit, Wendy P. Robinson
Software Mentions: 3
Published: over 5 years ago
10.1002/ece3.3514
Population genomics of the Asian tiger mosquito,<i>Aedes albopictus</i>: insights into the recent worldwide invasion
Cited by: 81
Author(s): Panayiota Kotsakiozi, Joshua B. Richardson, Verena Pichler, Guido Favia, Ademir Jesús Martins, Sandra Urbanelli, Peter Armbruster, Adalgisa Caccone
Software Mentions: 3
Published: about 7 years ago
10.3389/fpls.2017.01961
Rhizobium Impacts on Seed Productivity, Quality, and Protection of Pisum sativum upon Disease Stress Caused by Didymella pinodes: Phenotypic, Proteomic, and Metabolomic Traits
Cited by: 37
Author(s): Nima Ranjbar Sistani, Hans‐Peter Kaul, Getinet Desalegn, Stefanie Wienkoop
Software Mentions: 3
Published: about 7 years ago
10.1186/s12983-019-0335-8
Persistence of multiple patterns and intraspecific polymorphism in multi-species Müllerian communities of net-winged beetles
Cited by: 14
Author(s): Matěj Boček, Dominik Kusy, Michal Motyka, Ladislav Bocák
Software Mentions: 3
Published: about 5 years ago
10.1002/ece3.8015
Pleistocene dynamics of the Eurasian steppe as a driving force of evolution: Phylogenetic history of the genus <i>Capsella</i> (Brassicaceae)
Cited by: 7
Author(s): Anže Žerdoner Čalasan, Herbert Hurka, Dmitry A. German, Simon Pfanzelt, Frank R. Blattner, Anna Seidl, Barbara Neuffer
Software Mentions: 3
Published: over 3 years ago
10.1186/s41039-016-0035-3
Negotiated learner modelling to maintain today’s learner models
Cited by: 21
Author(s): Susan Bull
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.pgen.1005361
A Genome Scan for Genes Underlying Microgeographic-Scale Local Adaptation in a Wild Arabidopsis Species
Cited by: 54
Author(s): Susumu Kubota, Takaya Iwasaki, Kousuke Hanada, Atsushi J. Nagano, Asao Fujiyama, Atsushi Toyoda, Sumio Sugano, Yutaka Suzuki, Kouki Hikosaka, Motomi Itô, Shin Ichi Morinaga
Software Mentions: 3
Published: over 9 years ago
10.1002/ece3.3846
Oceanographic variation influences spatial genomic structure in the sea scallop,<i>Placopecten magellanicus</i>
Cited by: 11
Author(s): Mallory Van Wyngaarden, Paul V. R. Snelgrove, Claudio DiBacco, Lorraine C. Hamilton, Naiara Rodríguez-Ezpeleta, Luyao Zhan, Robert G. Beiko, Ian Bradbury
Software Mentions: 3
Published: almost 7 years ago
10.1016/j.xpro.2020.100061
Protocol for Projecting Allele Frequency Change under Future Climate Change at Adaptive-Associated Loci
Cited by: 4
Author(s): Meghan Blumstein, Andrew D. Richardson, David J. Weston, Jin Zhang, Wellington Muchero, Robin Hopkins
Software Mentions: 3
Published: about 4 years ago
10.1186/s12864-019-6015-4
Tracking the adoption of bread wheat varieties in Afghanistan using DNA fingerprinting
Cited by: 11
Author(s): Susanne Dreisigacker, Rajiv Sharma, Eric Huttner, Aziz Karimov, M. Qasem Obaidi, Pawan K. Singh, Carolina Sansaloni, Rosemary Shrestha, Kai Sonder, Hans J. Braun
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pntd.0007554
Complex interplay of evolutionary forces shaping population genomic structure of invasive Aedes albopictus in southern Europe
Cited by: 22
Author(s): Verena Pichler, Panayiota Kotsakiozi, Beniamino Caputo, Paola Serini, Adalgisa Caccone, Alessandra della Torre
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pntd.0007930
Genetic diversity of laboratory strains and implications for research: The case of Aedes aegypti
Cited by: 31
Author(s): Andrea Gloria‐Soria, John Soghigian, David Kellner, Jeffrey R. Powell
Software Mentions: 3
Published: almost 5 years ago
10.1186/s12870-020-02579-x
Genome-wide association study in accessions of the mini-core collection of mungbean (Vigna radiata) from the World Vegetable Gene Bank (Taiwan)
Cited by: 24
Author(s): Alena Sokolkova, М. О. Burlyaeva, Tatjana Valiannikova, M. A. Vishnyakova, Roland Schafleitner, Cheng‐Ruei Lee, Chau‐Ti Ting, Ramakrishnan M. Nair, Sergey V. Nuzhdin, Maria Samsonova, Eric von Wettberg
Software Mentions: 2
Published: about 4 years ago
10.1186/s12862-018-1325-8
First genomic study on Lake Tanganyika sprat Stolothrissa tanganicae: a lack of population structure calls for integrated management of this important fisheries target species
Cited by: 10
Author(s): Els L. R. De Keyzer, Zoë De Corte, Maarten Van Steenberge, Joost Raeymaekers, Federico C. F. Calboli, Nikol Kmentová, Théophile N’Sibula Mulimbwa, M. Virgilio, Carl Vangestel, Pascal Masilya Mulungula, Filip Volckaert, Maarten Pieterjan Vanhove
Software Mentions: 2
Published: almost 6 years ago
10.1186/1471-2148-6-93
Cited by: 104
Author(s): Robin M. D. Beck, Olaf R. P. Bininda‐Emonds, Marcel Cardillo, Fu Guo Robert Liu, Andy Purvis
Software Mentions: 2
Published: almost 19 years ago
10.1186/1471-2164-11-194
Evidence of perturbations of cell cycle and DNA repair pathways as a consequence of human and murine NF1-haploinsufficiency
Cited by: 17
Author(s): Alexander Pemov, Caroline Park, Karlyne M. Reilly, Douglas R. Stewart
Software Mentions: 2
Published: over 14 years ago
10.1186/s12864-021-07682-3
Population transcriptomic sequencing reveals allopatric divergence and local adaptation in Pseudotaxus chienii (Taxaceae)
Cited by: 8
Author(s): Li Liu, Zhen Wang, Yingjuan Su, Ting Wang
Software Mentions: 2
Published: over 3 years ago
10.1186/1755-8794-5-48
Integrative analysis of neuroblastoma and pheochromocytoma genomics data
Cited by: 15
Author(s): Péter M. Szabó, Miklós Pintér, Dorottya Szabó, Adrienn Zsippai, Attila Patócs, András Falus, Kàroly Rácz, Péter Igaz
Software Mentions: 2
Published: about 12 years ago
10.1186/s12870-016-0782-8
Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”
Cited by: 35
Author(s): Felix Seifert, Sandra Bössow, Jochen Kumlehn, Heike Gnad, Stefan Scholten
Software Mentions: 2
Published: over 8 years ago
10.1093/molbev/msab092
Migration through a Major Andean Ecogeographic Disruption as a Driver of Genetic and Phenotypic Diversity in a Wild Tomato Species
Cited by: 14
Author(s): Jacob B. Landis, Christopher M. Miller, Amanda K. Broz, Alexandra Bennett, Noelia Carrasquilla‐Garcia, Douglas R. Cook, Patricia A. Bedinger, Gaurav D. Moghe
Software Mentions: 2
Published: over 3 years ago
10.7717/peerj.8139
Genetic structure of Australian glass shrimp,<i>Paratya australiensis,</i>in relation to altitude
Cited by: 2
Author(s): Sharmeen Rahman, Daniel J. Schmidt, Jane Hughes
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pntd.0008492
Insecticide resistance and genetic structure of Aedes aegypti populations from Rio de Janeiro State, Brazil
Cited by: 10
Author(s): Rafi Ur Rahman, Luciano V. Cosme, Monique Melo Costa, Luana Carrara, José Bento Pereira Lima, Ademir Jesús Martins
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0187744
Genetic and physical mapping of anther extrusion in elite European winter wheat
Cited by: 14
Author(s): Quddoos H. Muqaddasi, Klaus Pillen, Jörg Plieske, Martin W. Ganal, Marion S. Röder
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0134126
Altitudinal Barrier to the Spread of an Invasive Species: Could the Pyrenean Chain Slow the Natural Spread of the Pinewood Nematode?
Cited by: 22
Author(s): Julien Haran, Alain Roques, Alexis Bernard, Christelle Robinet, Géraldine Roux
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0011031
Acetaminophen Modulates the Transcriptional Response to Recombinant Interferon-β
Cited by: 16
Author(s): Aaron Farnsworth, Anathea S. Flaman, Shiv S. Prasad, Caroline Gravel, Andrew Williams, Carole L. Yauk, Xuguang Li
Software Mentions: 2
Published: over 14 years ago
10.1002/ece3.6716
Association of genetic and climatic variability in giant sequoia, <i>Sequoiadendron giganteum</i> , reveals signatures of local adaptation along moisture‐related gradients
Cited by: 6
Author(s): Rainbow DeSilva, Richard S. Dodd
Software Mentions: 2
Published: about 4 years ago
10.1002/ece3.6614
Exploring genomic variation associated with drought stress in <i>Picea mariana</i> populations
Cited by: 4
Author(s): Joseph D. Napier, Guillaume de Lafontaine, Feng Sheng Hu
Software Mentions: 2
Published: over 4 years ago
10.1002/ece3.7812
Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
Cited by: 8
Author(s): Jeronymo Dalapicolla, Ronnie Alves, Rodolfo Jaffé, Santelmo Vasconcelos, Eder S. Pires, Gisele Nunes, José A. Pereira, José Tasso Felix Guimarães, Mariana Costa Dias, Taís Nogueira Fernandes, Daniela S. Scherer, Fernando Marino Gomes dos Santos, Alexandre Castilho, Mirella Pupo Santos, Emiliano Nicolas Calderón, Rodrigo Lemes Martins, Rodrigo Nunes da Fonseca, Francisco de Assis Esteves, Cecílio Fróis Caldeira, Guilherme Oliveira
Software Mentions: 2
Published: over 3 years ago
10.1002/ece3.2985
Genomic and phenotypic signatures of climate adaptation in an <i>Anolis</i> lizard
Cited by: 24
Author(s): Ariel Rodríguez, Tia Rusciano, Rickeisha Hamilton, Leondra Holmes, Deidra Jordan, Katharina C. Wollenberg Valero
Software Mentions: 2
Published: over 7 years ago
10.1002/ece3.6702
Species complex diversification by host plant use in an herbivorous insect: The source of Puerto Rican cactus mealybug pest and implications for biological control
Cited by: 8
Author(s): Daniel Poveda-Martínez, María Belén Aguirre, Guillermo A. Logarzo, Stephen D. Hight, Serguei V. Triapitsyn, Hilda Diaz-Sotero, M. D. Vitorino, Esteban Hasson
Software Mentions: 2
Published: over 4 years ago
10.1111/eva.13236
Invasion and rapid adaptation of guppies (<i>Poecilia reticulata</i>) across the Hawaiian Archipelago
Cited by: 3
Author(s): William C. Rosenthal, Peter B. McIntyre, Peter J. Lisi, Robert B. Prather, Kristine N. Moody, Michael J. Blum, J. Derek Hogan, Sean D. Schoville
Software Mentions: 2
Published: over 3 years ago
10.3389/fgene.2019.00954
Last-Generation Genome–Environment Associations Reveal the Genetic Basis of Heat Tolerance in Common Bean (Phaseolus vulgaris L.)
Cited by: 61
Author(s): Felipe López-Hernández, Andrés J. Cortés
Software Mentions: 2
Published: almost 5 years ago
10.3389/fpls.2020.562432
Rpv29, Rpv30 and Rpv31: Three Novel Genomic Loci Associated With Resistance to Plasmopara viticola in Vitis vinifera
Cited by: 32
Author(s): Maryam Sargolzaei, Giuliana Maddalena, N. Bitsadze, D. Maghradze, P.A. Bianco, O. Failla, Silvia Laura Toffolatti, Gabriella De Lorenzis
Software Mentions: 2
Published: about 4 years ago
10.1534/g3.117.041228
Genomic Comparison of Indigenous African and Northern European Chickens Reveals Putative Mechanisms of Stress Tolerance Related to Environmental Selection Pressure
Cited by: 28
Author(s): Damarius S. Fleming, Steffen Weigend, Henner Simianer, Annett Weigend, Max F. Rothschild, Carl J. Schmidt, C. M. Ashwell, Michael E. Persia, James M. Reecy, Susan J. Lamont
Software Mentions: 2
Published: over 7 years ago
10.1038/s41437-019-0249-4
Genomic signatures of seed mass adaptation to global precipitation gradients in sorghum
Cited by: 27
Author(s): J Wang, Zhenbin Hu, Hari D. Upadhyaya, Geoffrey P. Morris
Software Mentions: 2
Published: over 5 years ago
10.3390/s140100975
Efficient Hardware Implementation of the Lightweight Block Encryption Algorithm LEA
Cited by: 46
Author(s): Donggeon Lee, Dong-Chan Kim, Daesung Kwon, Howon Kim
Software Mentions: 2
Published: almost 11 years ago
10.3390/s19194312
PRISEC: Comparison of Symmetric Key Algorithms for IoT Devices
Cited by: 51
Author(s): Daniel A. F. Saraiva, Valderi Reis Quietinho Leithardt, Diandre de Paula, André Sales Mendes, Gabriel Villarrubia González, Paul Crocker
Software Mentions: 2
Published: about 5 years ago
10.3390/ijms22041676
Advances in De Novo Drug Design: From Conventional to Machine Learning Methods
Cited by: 103
Author(s): Varnavas D. Mouchlis, Antreas Afantitis, Angela Serra, Michele Fratello, Anastasios G. Papadiamantis, Vassilis Aidinis, Iseult Lynch, Dario Greco, Georgia Melagraki
Software Mentions: 2
Published: almost 4 years ago
10.1002/ece3.4125
Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms
Cited by: 17
Author(s): Anastasia Klimova, Alfredo Ortega‐Rubio, David L. J. Vendrami, Joseph I. Hoffman
Software Mentions: 1
Published: over 6 years ago