Projects: bioconductor: GenomicDataCommons
https://packages.ecosyste.ms/registries/bioconductor.org/packages/GenomicDataCommons
NIH / NCI Genomic Data Commons Access
1 version
Latest release: almost 2 years ago
2 dependent packages
79,649 downloads total
Enhanced Analysis
Educational Contributors:
[email protected]
[email protected]
Repository Activity:
Repository Owner:
Bioconductor (organization)
Software for the analysis and comprehension of high-throughput genomic data Institutional
Software for the analysis and comprehension of high-throughput genomic data Institutional
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+15
Institutional repository owner
Repository owned by research institution -
+18
Science terms in README
9 scientific terms found in README
Penalties:
-
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning GenomicDataCommons 8
10.1155/2021/8020879
Novel lncRNA Panel as for Prognosis in Esophageal Squamous Cell Carcinoma Based on ceRNA Network MechanismCited by: 10
Author(s): Jin Zhang, Fei Xiao, Guangliang Qiang, Zhenrong Zhang, Qianli Ma, Hao Yang, H. Rosie Xing, Chaoyang Liang
Software Mentions: 22
Published: almost 4 years ago
10.3390/ijms22062822
A Detailed Catalogue of Multi-Omics Methodologies for Identification of Putative Biomarkers and Causal Molecular Networks in Translational Cancer ResearchCited by: 6
Author(s): Efstathios Iason Vlachavas, Jonas Bohn, Frank Ückert, Sylvia Nürnberg
Software Mentions: 16
Published: over 4 years ago
10.1186/s12885-020-07325-y
Identification of a novel subgroup of endometrial cancer patients with loss of thyroid hormone receptor beta expression and improved survivalCited by: 5
Author(s): Daniel G. Piqué, John M. Greally, Jessica C. Mar
Software Mentions: 5
Published: almost 5 years ago
10.1038/s41416-019-0387-8
A novel approach to modelling transcriptional heterogeneity identifies the oncogene candidate CBX2 in invasive breast carcinomaCited by: 23
Author(s): Daniel G. Piqué, Cristina Montagna, John M. Greally, Jessica C. Mar
Software Mentions: 4
Published: over 6 years ago
10.3389/fonc.2021.700568
Somatic Copy Number Alterations in Human Cancers: An Analysis of Publicly Available Data From The Cancer Genome AtlasCited by: 28
Author(s): Luuk Harbers, Federico Agostini, Marcin Nicoś, Dimitri Poddighe, Magda Bienko, Nicola Crosetto
Software Mentions: 2
Published: almost 4 years ago
10.1038/s12276-020-00525-3
Naa20, the catalytic subunit of NatB complex, contributes to hepatocellular carcinoma by regulating the LKB1–AMPK–mTOR axisCited by: 11
Author(s): Taek Yeol Jung, Jae Eun Ryu, Mi Mi Jang, Soh Yeon Lee, Gyu Rin Jin, Chan Woo Kim, Chang Kyu Lee, Hyelee Kim, Eung Han Kim, Sera Park, Seonjeong Lee, Cheolju Lee, Wankyu Kim, Tae Soo Kim, Bong Gun Ju, Hyun‐Seok Kim
Software Mentions: 1
Published: over 4 years ago
10.3389/fonc.2021.622182
Immune Modeling Analysis Reveals Immunologic Signatures Associated With Improved Outcomes in High Grade Serous Ovarian CancerCited by: 11
Author(s): Nicole James, Katherine Miller, Natalie A. LaFranzo, Erin Lips, Morgan Woodman, Joyce Ou, Jennifer Ribeiro
Software Mentions: 1
Published: over 4 years ago
10.3389/fphar.2021.634097
Prediction of Synergistic Drug Combinations for Prostate Cancer by Transcriptomic and Network CharacteristicsCited by: 8
Author(s): Shiqi Li, Fuhui Zhang, Xincai Xiao, Yanzhi Guo, Zhining Wen, Menglong Li, Xuemei Pu
Software Mentions: 1
Published: over 4 years ago