Papers: 10.3390/ijms22062822
https://doi.org/10.3390/ijms22062822
A Detailed Catalogue of Multi-Omics Methodologies for Identification of Putative Biomarkers and Causal Molecular Networks in Translational Cancer Research
Cited by: 6
Author(s): Efstathios Iason Vlachavas, Jonas Bohn, Frank Ückert, Sylvia Nürnberg
Published: over 4 years ago
Software Mentions 16
bioconductor: cBioPortalData
Exposes and makes available data from the cBioPortal web resourcesPapers that mentioned: 1
Very Likely Science (100)
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
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bioconductor: MultiAssayExperiment
Software for the integration of multi-omics experiments in BioconductorPapers that mentioned: 16
Very Likely Science (85)
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bioconductor: ReactomeGSA
Client for the Reactome Analysis Service for comparative multi-omics gene set analysisPapers that mentioned: 4
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bioconductor: TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC dataPapers that mentioned: 276
Very Likely Science (100)
cran: ActivePathways
Integrative Pathway Enrichment Analysis of Multivariate Omics DataPapers that mentioned: 3
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pypi: Pathway
Pathway is a data processing framework which takes care of streaming data updates for you.Papers that mentioned: 827
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