Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: EWCE

https://packages.ecosyste.ms/registries/bioconductor.org/packages/EWCE

Expression Weighted Celltype Enrichment
2 versions
Latest release: about 1 year ago
7,207 downloads total

Papers Mentioning EWCE 13

Cross-platform transcriptional profiling identifies common and distinct molecular pathologies in Lewy body diseases
Cited by: 23
Author(s): Rahel Feleke, Regina H. Reynolds, Amy M. Smith, Bension S. Tilley, Sarah A. Gagliano Taliun, John Hardy, Paul M. Matthews, Steve Gentleman, David R. Owen, Michael R. Johnson, Prashant K. Srivastava, Mina Ryten
Software Mentions: 14
Published: over 3 years ago

10.3390/genes12040491

Dissection of the Genetic Association between Anorexia Nervosa and Obsessive–Compulsive Disorder at the Network and Cellular Levels
Cited by: 4
Author(s): Weichen Song, Weidi Wang, Shunying Yu, Guan Ning Lin
Software Mentions: 6
Published: over 3 years ago

10.1093/brain/awaa242

Functional gene networks reveal distinct mechanisms segregating in migraine families
Cited by: 14
Author(s): Anne Marie Rasmussen, Lisette J. A. Kogelman, David M. Kristensen, Mona Ameri Chalmer, Jes Olesen, Thomas Folkmann Hansen
Software Mentions: 5
Published: about 4 years ago

10.3390/life11020172

Integrative Analysis Identified Key Schizophrenia Risk Factors from an Abnormal Behavior Mouse Gene Set
Cited by: 1
Author(s): Chen Miao, Weidi Wang, Weichen Song, Wei Qian, Guan Ning Lin
Software Mentions: 5
Published: over 3 years ago

10.1038/s41398-017-0058-6

Enriched expression of genes associated with autism spectrum disorders in human inhibitory neurons
Cited by: 43
Author(s): Ping Wang, Dejian Zhao, Herbert M. Lachman, Deyou Zheng
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41398-021-01256-3

Functional brain defects in a mouse model of a chromosomal t(1;11) translocation that disrupts DISC1 and confers increased risk of psychiatric illness
Cited by: 3
Author(s): Marion Bonneau, Shane T. O’ Sullivan, Miguel A. Gonzalez‐Lozano, Paul Baxter, Phillippe Gautier, Elena Marchisella, Neil Robert Hardingham, Robert Chesters, Helen S. Torrance, David M. Howard, Maurits A. Jansen, Melanie McMillan, Yasmin Singh, Michel Didier, Frank Koopmans, Colin A. Semple, Hansjürgen Volkmer, Maarten Loos, Kevin Fox, Giles E. Hardingham, Anthony C. Vernon, David J. Porteous, August B. Smit, David J. Price, J. Kirsty Millar
Software Mentions: 3
Published: almost 4 years ago

10.1093/bioinformatics/btab175

Modeling multifunctionality of genes with secondary gene co-expression networks in human brain provides novel disease insights
Cited by: 3
Author(s): Juan A. Sánchez, Ana Luisa Gil-Martínez, Alejandro Cisterna, Sonia García-Ruiz, Alicia Gómez-Pascual, Regina H. Reynolds, Mike A. Nalls, John Hardy, Mina Ryten, Juan A. Botía
Software Mentions: 3
Published: over 3 years ago

10.3389/fncel.2020.00059

Cell Type-Specific Gene Network-Based Analysis Depicts the Heterogeneity of Autism Spectrum Disorder
Cited by: 8
Author(s): Jinting Guan, Yiping Lin, Guoli Ji
Software Mentions: 3
Published: over 4 years ago

10.1093/brain/awaa217

Dystonia genes functionally converge in specific neurons and share neurobiology with psychiatric disorders
Cited by: 45
Author(s): Niccolò E. Mencacci, Regina H Reynolds, Sonia García-Ruiz, Jana Vandrovcová, Paola Forabosco, Álvaro Sánchez‐Ferrer, Viola Volpato, Juan A. Botía, Karishma D’Sa, Paola Forabosco, Sebastian Guelfi, John Hardy, Jana Vandrovcová, Chris-Ann Mackenzie, Adaikalavan Ramasamy, Mina Ryten, Colin Smith, Daniah Trabzuni, Michael E. Weale, Alastair Noyce, Rauan Kaiyrzhanov, Ben Middlehurst, Demis A. Kia, Manuela Tan, Henry Houlden, Huw R. Morris, Hélène Plun‐Favreau, Peter Holmans, John Hardy, Daniah Trabzuni, José Brás, John P. Quinn, Kin Y. Mok, Kerri J. Kinghorn, Kimberley Billingsley, Nicholas W. Wood, Patrick A. Lewis, Rita Guerreiro, Ruth C. Lovering, Lea R’Bibo, Claudia Manzoni, Mie Rizig, Mina Ryten, Sebastian Guelfi, Valentina Escott‐Price, Viorica Chelban, Thomas Foltynie, Nigel Williams, Chingiz Shashakin, Nazira Zharkinbekova, Elena Zholdybayeva, Akbota Aitkulova, Kirsten Harvey, Michael E. Weale, Kailash P. Bhatia, Caleb Webber, John Hardy, Juan A. Botía, Mina Ryten
Software Mentions: 2
Published: over 4 years ago

10.1038/s41398-021-01432-5

A bioinformatic study revealed serotonergic neurons are involved in the etiology and therapygenetics of anxiety disorders
Cited by: 2
Author(s): Hankui Liu, Sijie He, Jianguo Zhang
Software Mentions: 1
Published: over 3 years ago

10.1093/braincomms/fcaa122

Analysis of brain atrophy and local gene expression in genetic frontotemporal dementia
Cited by: 15
Author(s): André Altmann, David M. Cash, Martina Bocchetta, Carolin Heller, Regina H Reynolds, Katrina Moore, Rhian S. Convery, David L. Thomas, John C. van Swieten, Fermín Moreno, Raquel Sánchez‐Valle, Barbara Borroni, Robert Laforce, Mario Masellis, Maria Carmela Tartaglia, Caroline Graff, Daniela Galimberti, James B. Rowe, Elizabeth Finger, Matthis Synofzik, Rik Vandenberghe, Alexandre de Mendonça, Fabrizio Tagliavini, Isabel Santana, Simon Ducharme, Chris Butler, Alex Gerhard, Johannes Levin, Adrian Danek, Giovanni B. Frisoni, Roberta Ghidoni, Sandro Sorbi, Markus Otto, Mina Ryten, Jonathan D. Rohrer, Genfi Genetic Ftd Initiative
Software Mentions: 1
Published: almost 5 years ago

10.3389/fnins.2016.00016

Identification of Vulnerable Cell Types in Major Brain Disorders Using Single Cell Transcriptomes and Expression Weighted Cell Type Enrichment
Cited by: 181
Author(s): Nathan G. Skene, Seth G. N. Grant
Software Mentions: 1
Published: almost 9 years ago

10.1007/s00401-020-02181-3

Large-scale pathway specific polygenic risk and transcriptomic community network analysis identifies novel functional pathways in Parkinson disease
Cited by: 62
Author(s): Sara Bandrés‐Ciga, Sara Sáez-Atiénzar, J. J. Kim, Mary B. Makarious, Faraz Faghri, Mónica Díez-Fairén, Hirotaka Iwaki, Hampton Leonard, Juan A. Botía, Mina Ryten, Dena G. Hernandez, J. Raphael Gibbs, Jinhui Ding, Ziv Gan‐Or, Alastair J. Noyce, Lasse Pihlstrøm, Ali Torkamani, Anthony R. Soltis, Clifton L. Dalgard, Sonja W. Scholz, Bryan J. Traynor, Debra Ehrlich, Clemens R. Scherzer, Matthew Bookman, Mark Cookson, Cornelis Blauwendraat, Michael A. Nalls, Andrew B. Singleton
Software Mentions: 1
Published: over 4 years ago