Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: BubbleTree

https://packages.ecosyste.ms/registries/bioconductor.org/packages/BubbleTree

BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data
1 version
Latest release: 10 months ago
14,520 downloads total

Papers Mentioning BubbleTree 3

10.1371/journal.pgen.1008743

The genomic landscape of metastasis in treatment-naïve breast cancer models
Cited by: 16
Author(s): Christina R. Ross, Karol Szczepanek, Maxwell Lee, Howard H. Yang, Tinghu Qiu, Jack D. Sanford, Kent W. Hunter
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0205406

Examining the contribution of smoking and HPV towards the etiology of oral cavity squamous cell carcinoma using high-throughput sequencing: A prospective observational study
Cited by: 10
Author(s): Andrew P Zammit, Rohit Anthony Sinha, Caroline Cooper, Christopher Perry, Ian H. Frazer, Zewen Kelvin Tuong
Software Mentions: 6
Published: almost 6 years ago

10.18632/oncotarget.15014

The subclonal structure and genomic evolution of oral squamous cell carcinoma revealed by ultra-deep sequencing
Cited by: 22
Author(s): Siavosh Tabatabaeifar, Mads Thomassen, Martin Jakob Larsen, Stine Rosenkilde Larsen, Torben A. Kruse, Jens Ahm Sørensen
Software Mentions: 1
Published: over 7 years ago