Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1008743

https://doi.org/10.1371/journal.pgen.1008743

The genomic landscape of metastasis in treatment-naïve breast cancer models

Cited by: 16
Author(s): Christina R. Ross, Karol Szczepanek, Maxwell Lee, Howard H. Yang, Tinghu Qiu, Jack D. Sanford, Kent W. Hunter
Published: over 4 years ago

Software Mentions 6

bioconductor: BubbleTree
BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data
Papers that mentioned: 3
bioconductor: cn.mops
cn.mops - Mixture of Poissons for CNV detection in NGS data
Papers that mentioned: 8
bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: mops
Papers that mentioned: 3
pypi: PyMT
A framework for making accelerated multitouch UI
Papers that mentioned: 12