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Projects: bioconductor: BridgeDbR

https://packages.ecosyste.ms/registries/bioconductor.org/packages/BridgeDbR

Code for using BridgeDb identifier mapping framework from within R
1 version
Latest release: over 2 years ago
16,545 downloads total

Enhanced Analysis
Educational Contributors: jennifer.wokaty@sph.cuny.edu
Repository Activity:
Repository Owner: BridgeDb (organization)
README Analysis: DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +20 Educational commit emails
    1 contributors with educational email addresses
  • +2 Science terms in README
    1 scientific terms found in README
  • +10 DOI references
    1 DOI references found in README
Penalties:
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning BridgeDbR 4

10.3390/metabo9100200
The metaRbolomics Toolbox in Bioconductor and beyond
Cited by: 61
Author(s): Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy A. Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Michael Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne Thévenot, Hendrik Treutler, Ralf Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Software Mentions: 92
Published: over 6 years ago
10.1186/s12859-015-0708-8
Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment
Cited by: 13
Author(s): Anwesha Bohler, Lars Eijssen, Martijn P. van Iersel, C. René Leemans, Egon Willighagen, Martina Kutmon, Magali Jaillard, Chris T. Evelo
Software Mentions: 5
Published: almost 11 years ago
10.3389/fgene.2019.00059
Beyond Pathway Analysis: Identification of Active Subnetworks in Rett Syndrome
Cited by: 10
Author(s): Ryan Miller, Friederike Ehrhart, Lars Eijssen, Denise Slenter, Leopold Curfs, Chris T. Evelo, Egon Willighagen, Martina Kutmon
Software Mentions: 3
Published: over 7 years ago
10.3389/fgene.2018.00661
Introducing WikiPathways as a Data-Source to Support Adverse Outcome Pathways for Regulatory Risk Assessment of Chemicals and Nanomaterials
Cited by: 33
Author(s): Marvin Martens, Tim Verbruggen, Penny Nymark, Roland C. Grafström, Lyle D. Burgoon, Hristo Aladjov, Fernando Torres Andón, Chris T. Evelo, Egon Willighagen
Software Mentions: 2
Published: over 7 years ago