10.1371/journal.pone.0075293

Major Transcriptome Reprogramming Underlies Floral Mimicry Induced by the Rust Fungus Puccinia monoica in Boechera stricta
Cited by: 21
Author(s): Liliana Cano, Sylvain Raffaele, Riston Haugen, Diane G. O. Saunders, Lauriebeth Leonelli, Dan MacLean, Saskia A. Hogenhout, Sophien Kamoun
Software Mentions: 1
Published: almost 13 years ago

10.1093/bioinformatics/btz905

amplimap: a versatile tool to process and analyze targeted NGS data
Cited by: 5
Author(s): Nils Koelling, Marie Bernkopf, Eduardo Calpena, Geoffrey J. Maher, Kerry A. Miller, Hannah K Ralph, Anne Goriely, Andrew Wilkie
Software Mentions: 1
Published: over 6 years ago

10.1093/bioinformatics/btz582

amplimap: a versatile tool to process and analyze targeted NGS data
Cited by: 7
Author(s): Nils Koelling, Marie Bernkopf, Eduardo Calpena, Geoffrey J. Maher, Kerry A. Miller, Hannah K Ralph, Anne Goriely, Andrew Wilkie
Software Mentions: 1
Published: about 7 years ago

10.3390/ma12101687

Sensitivity and Uncertainty Analysis of One-Dimensional Tanaka and Liang-Rogers Shape Memory Alloy Constitutive Models
Cited by: 11
Author(s): A. B. M. Rezaul Islam, Ernur Karadoğan
Software Mentions: 1
Published: about 7 years ago

10.3389/fvets.2021.599815

Genetic Diversity of African Trypanosomes in Tsetse Flies and Cattle From the Kafue Ecosystem
Cited by: 6
Author(s): Yoshinari Nakamura, Kentaro Hayashida, Victoire Delesalle, Yongjin Qiu, Ryosuke Omori, Martin Simuunza, Chihiro Sugimoto, Boniface Namangala, Junya Yamagishi
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-83719-7

A refined proposal for the origin of dogs: the case study of Gnirshöhle, a Magdalenian cave site
Cited by: 13
Author(s): Chris Baumann, Saskia Pfrengle, Susanne C. Münzel, Martyna Molak, Tatiana R. Feuerborn, Abagail Breidenstein, Ella Reiter, Gerd Albrecht, Claus-Joachim Kind, Christian Verjux, Charlotte Leduc, Nicholas J. Conard, Dorothée G. Drucker, Liane Giemsch, Olaf Thalmann, Hervé Bocherens, Verena J. Schuenemann
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-96248-0

Spatial variability of nitrate pollution and its sources in a hilly basin of the Yangtze River based on clustering
Cited by: 5
Author(s): Yuhuan Cui, Jie Wang, Shuang Hao
Software Mentions: 1
Published: about 5 years ago

10.1093/rpd/ncv462

EXPOSURE OF THE SWISS POPULATION BY RADIODIAGNOSTICS: 2013 REVIEW
Cited by: 24
Author(s): R. le Coultre, Julie Bize, Mélanie Champendal, D.C. Wittwer, Nick Ryckx, A. Aroua, Ph. R. Trueb, Francis R. Verdun
Software Mentions: 1
Published: almost 11 years ago

10.3390/ijerph17061921

Assessing Seasonal Nitrate Contamination by Nitrate Dual Isotopes in a Monsoon-Controlled Bay with Intensive Human Activities in South China
Cited by: 9
Author(s): Jiacheng Li, Ruixue Cao, Qibin Lao, Fajin Chen, Chunqing Chen, Xin Zhou, Mengxi Yu, Qingmei Zhu
Software Mentions: 1
Published: over 6 years ago

10.3390/pharmaceutics13060790

Mechanochemistry: A Green Approach in the Preparation of Pharmaceutical Cocrystals
Cited by: 42
Author(s): Mizraín Solares-Briones, Guadalupe Coyote-Dotor, José C. Páez-Franco, Miriam R. Zermeño-Ortega, Carmen Myriam de la O Contreras, Daniel Canseco‐González, Alcives Avila‐Sorrosa, David Morales‐Morales, Juan Manuel Germán-Acacio
Software Mentions: 1
Published: about 5 years ago

10.3390/nu11081932

Children in Need—Diagnostics, Epidemiology, Treatment and Outcome of Early Onset Anorexia Nervosa
Cited by: 49
Author(s): Beate Herpertz‐Dahlmann, Brigitte Dahmen
Software Mentions: 1
Published: about 7 years ago

10.3390/foods10050948

Application of Spectrometric Technologies in the Monitoring and Control of Foods and Beverages
Cited by: 2
Author(s): Ricard Boqué, Barbara Giussani
Software Mentions: 1
Published: over 5 years ago

10.14573/altex.1710141

Computational approaches to chemical hazard assessment
Cited by: 30
Author(s): Thomas Luechtefeld
Software Mentions: 1
Published: over 9 years ago

10.1002/advs.202004831

Extracellular Vesicles from Child Gut Microbiota Enter into Bone to Preserve Bone Mass and Strength
Cited by: 61
Author(s): Yu Liu, Chun‐Yuan Chen, Zhengzhao Liu, Zhenguo Luo, Shan‐Shan Rao, Ling Jin, Tengfei Wan, Yue Tao, Yuyong Tan, Hao Yin, Fei Yang, Feiyu Huang, Jing Guo, Yiyi Wang, Kun Xia, Jia Cao, Zhenxing Wang, Chengyu Hong, Mingjie Luo, Xiaozhou Hu, Yiwei Liu, Wei Du, Jian Luo, Yingyao Hu, Yan Zhang, Jie Huang, Hong‐Ming Li, Ben Wu, Hao‐Ming Liu, Tuan‐Hui Chen, Yuxuan Qian, Youyou Li, Shi‐Kai Feng, Yang Chen, Luyue Qi, Ran Xu, Siyuan Tang, Hui Xie
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0232025

Placental defects lead to embryonic lethality in mice lacking the Formin and PCP proteins Daam1 and Daam2
Cited by: 8
Author(s): Muneo Nakaya, Kristibjorn Orri Gudmundsson, Yuko Komiya, Jonathan R. Keller, Raymond Habas, Terry P. Yamaguchi, Rieko Ajima
Software Mentions: 1
Published: over 6 years ago

10.4102/phcfm.v12i1.2390

Patient-centred care: The patients’ perspective – A mixed-methods pilot study
Cited by: 0
Author(s): Roseanne E. Turner, Elize Archer
Software Mentions: 1
Published: almost 6 years ago

10.18632/aging.203269

Bioinformatics analysis of the role of CXC ligands in the microenvironment of head and neck tumor
Cited by: 7
Author(s): Fengyang Jing, Jian-Xiong Wang, Liming Zhou, Yujie Ning, Shengqian Xu, Guoping Zhu
Software Mentions: 1
Published: about 5 years ago

10.18632/aging.103943

TCGA and ESTIMATE data mining to identify potential prognostic biomarkers in HCC patients
Cited by: 8
Author(s): Guolin He, Shunjun Fu, Li Yang, Ting Li, Purong Mei, Lei Feng, Lei Cai, Yuan Cheng, Chengyu Zhou, Yujun Tang, Wenbin Huang, Haiyan Liu, Bohong Cen, Mingxin Pan, Yi Gao
Software Mentions: 1
Published: almost 6 years ago

10.1111/acel.13253

Proteomic assessment of serum biomarkers of longevity in older men
Cited by: 9
Author(s): Eric S. Orwoll, Jack Wiedrick, Carrie M. Nielson, Jon Jacobs, Erin Baker, Paul Piehowski, Vladislav Petyuk, Yuqian Gao, Tujin Shi, Richard Smith, Douglas C. Bauer, Steven R. Cummings, Jodi Lapidus
Software Mentions: 1
Published: almost 6 years ago

10.3390/v12040394

Distinct Contributions of Different Domains within the HIV-1 Gag Polyprotein to Specific and Nonspecific Interactions with RNA
Cited by: 11
Author(s): Tomáš Kroupa, Siddhartha A.K. Datta, Alan Rein
Software Mentions: 1
Published: over 6 years ago

10.1093/bioinformatics/btab162

MixTwice: large-scale hypothesis testing for peptide arrays by variance mixing
Cited by: 4
Author(s): Zihao Zheng, Aisha M Mergaert, Irene M. Ong, Miriam A. Shelef, Michael A. Newton
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.11712

From data compilation to model validation: comparing three ecosystem models of the Tasman and Golden Bays, New Zealand
Cited by: 0
Author(s): Vidette McGregor, Péter Horn, Adèle Dutilloy, S. Deblina Datta, Alice Rogers, Javier Porobić, A. L. Dunn, Ian Tuck
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89408-9

Reference values and factors associated with hand grip strength among older adults living in southeastern Poland
Cited by: 12
Author(s): Agnieszka Wiśniowska-Szurlej, Agnieszka Ćwirlej-Sozańska, Justyna Kilian, Natalia Wołoszyn, Bernard Sozański, Anna Wilmowska-Pietruszyńska
Software Mentions: 1
Published: over 5 years ago

10.3389/fnhum.2014.00805

Quantifying the watercolor effect: from stimulus properties to neural models
Cited by: 2
Author(s): Frédéric Devinck, Peggy Gérardin, Michel Dojat, Kenneth Knoblauch
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0253862

Biomechanics of subtrochanteric fracture fixation using short cephalomedullary nails: A finite element analysis
Cited by: 10
Author(s): Dae-Kyung Kwak, Sun-Hee Bang, Won-Hyeon Kim, Sung–Jae Lee, Seunghun Lee, Je-Hyun Yoo
Software Mentions: 1
Published: about 5 years ago

10.3390/ani11092681

Regional Differences in the Diets of Adélie and Emperor Penguins in the Ross Sea, Antarctica
Cited by: 1
Author(s): Seoyeon Hong, Jong‐Ku Gal, Bo‐Yeon Lee, Wuju Son, Jin-Woo Jung, Hyoung Sul La, Kyung‐Hoon Shin, Jeong-Hoon Kim, Sung Yong Ha
Software Mentions: 1
Published: almost 5 years ago

10.1186/1744-859X-8-27

Treatment of psychotic symptoms in bipolar disorder with aripiprazole monotherapy: a meta-analysis
Cited by: 20
Author(s): Konstantinos Ν. Fountoulakis, Xénia Gonda, Eduard Vieta, Frank L. Schmidt
Software Mentions: 1
Published: over 16 years ago

10.3390/antiox10040518

Exploring Molecular Insights of Cereal Peptidic Antioxidants in Metabolic Syndrome Prevention
Cited by: 9
Author(s): Fred Kwame Ofosu, Dylis-Judith Fafa Mensah, ‪Eric Banan-Mwine Daliri, Deog‐Hwan Oh
Software Mentions: 1
Published: over 5 years ago

10.1128/AEM.01528-17

Probing the Genome-Scale Metabolic Landscape of Bordetella pertussis, the Causative Agent of Whooping Cough
Cited by: 20
Author(s): Filipe Branco dos Santos, Brett G. Olivier, Joost Boele, Vincent Smessaert, Philippe De Rop, Petra Krumpochova, Gunnar W. Klau, Martin Giera, Philippe Dehottay, Bas Teusink, Philippe Goffin
Software Mentions: 1
Published: almost 9 years ago

10.1186/s13075-019-1816-z

Microbiome dysbiosis is associated with disease duration and increased inflammatory gene expression in systemic sclerosis skin
Cited by: 24
Author(s): Michael E. Johnson, Jennifer M Franks, Guoshuai Cai, Bhaven K. Mehta, Tammara A. Wood, Kimberly Archambault, Patricia A. Pioli, Robert W. Simms, Nicole M. Orzechowski, Sarah T. Arron, Michael L. Whitfield
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2105-12-84

Meta-analysis of gene expression microarrays with missing replicates
Cited by: 3
Author(s): Fan Shi, Gad Abraham, Christopher Leckie, Izhak Haviv, Adam Kowalczyk
Software Mentions: 1
Published: over 15 years ago

10.1038/s41598-021-95416-6

Low level visual features support robust material perception in the judgement of metallicity
Cited by: 14
Author(s): Joshua S. Harvey, Hannah E. Smithson
Software Mentions: 1
Published: about 5 years ago

10.1177/2041669516687770

A Glossy Simultaneous Contrast: Conjoint Measurements of Gloss and Lightness
Cited by: 18
Author(s): Sabrina Hansmann-Roth, Pascal Mamassian
Software Mentions: 1
Published: over 9 years ago

10.1002/sim.3941

Estimating the distribution of the window period for recent HIV infections: A comparison of statistical methods
Cited by: 26
Author(s): Michael Sweeting, Daniela De Angelis, John Parry, Barbara Suligoi
Software Mentions: 1
Published: over 15 years ago

10.1093/gigascience/giz062

High-resolution computational modeling of immune responses in the gut
Cited by: 11
Author(s): Meghna Verma, Josep Bassaganya‐Riera, Andrew Leber, Nuria Tubau-Juni, Stefan Hoops, Vida Abedi, Xi Chen, Raquel Hontecillas
Software Mentions: 1
Published: about 7 years ago

10.1186/s12901-015-0019-8

Discriminant validity and test re-test reproducibility of a gait assessment in patients with vestibular dysfunction
Cited by: 17
Author(s): Annatina Schmidheiny, Jaap Swanenburg, Dominik Straumann, Eling D. de Bruin, Ruud H. Knols
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12864-020-07341-z

Multi-trait GWAS using imputed high-density genotypes from whole-genome sequencing identifies genes associated with body traits in Nile tilapia
Cited by: 36
Author(s): Grazyella Massako Yoshida, José M. Yáñez
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-015-1969-3

The impact of PPARα activation on whole genome gene expression in human precision cut liver slices
Cited by: 65
Author(s): Aafke W. F. Janssen, Bark Betzel, Geert Stoopen, Frits J. Berends, Ignace Janssen, Ad Peijnenburg, Sander Kersten
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2164-9-210

Genomics of an extreme psychrophile, Psychromonas ingrahamii
Cited by: 117
Author(s): Matilda White Riley, James T. Staley, Antoine Danchin, Ting Zhang Wang, Thomas Brettin, Loren Hauser, Miriam Land, Linda S. Thompson
Software Mentions: 1
Published: over 18 years ago

10.1186/s12711-020-00575-1

Confirmed effects of candidate variants for milk production, udder health, and udder morphology in dairy cattle
Cited by: 30
Author(s): Thierry Tribout, Pascal Croiseau, Rachel Lefebvre, Anne Barbat, Mekki Boussaha, Sébastien Fritz, Didier Boichard, Chris Hozé, Marie-Pierre Sanchez
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2164-13-54

Zonation related function and ubiquitination regulation in human hepatocellular carcinoma cells in dynamic vs. static culture conditions
Cited by: 23
Author(s): Shu Cheng, Jean‐Matthieu Prot, Éric Leclerc, Frédéric Y. Bois
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2164-6-46

Osteo-Promoter Database (OPD) – Promoter analysis in skeletal cells
Cited by: 9
Author(s): Inbal Grienberg, Dafna Benayahu
Software Mentions: 1
Published: over 21 years ago

10.1016/j.trci.2017.04.007

Power analysis to detect treatment effects in longitudinal clinical trials for Alzheimer's disease
Cited by: 6
Author(s): Zhiyue Huang, Graciela Muniz‐Terrera, Brian D. M. Tom
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0021289

Identification of a Highly Antigenic Linear B Cell Epitope within Plasmodium vivax Apical Membrane Antigen 1 (AMA-1)
Cited by: 39
Author(s): Lilian Lacerda Bueno, Francisco Pereira Lobo, Cristiane Guimarães Morais, Luíza Carvalho Mourão, Ricardo Andrez Machado-de-Ávila, Irene S. Soares, Cor Jésus Fernandes Fontes, Marcus Vinícius Guimarães Lacerda, Carlos Chávez Olórtegui, Daniella Castanheira Bartholomeu, Ricardo Toshio Fujiwara, Érika Martins Braga
Software Mentions: 1
Published: about 15 years ago

10.1186/s12862-021-01832-7

Positive selection on two mitochondrial coding genes and adaptation signals in hares (genus Lepus) from China
Cited by: 2
Author(s): Asma Awadi, Hichem Ben Slimen, Helmut Schaschl, Felix Knauer, Franz Suchentrunk
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0115388

Evoked Emotions Predict Food Choice
Cited by: 122
Author(s): Jelle R. Dalenberg, S. Gutjar, Gert J. Ter Horst, Kees de Graaf, Remco Renken, Gerry Jager
Software Mentions: 1
Published: over 11 years ago

10.1186/s12877-021-02261-3

Clinical features and outcomes of COVID-19 in older adults: a systematic review and meta-analysis
Cited by: 67
Author(s): Sunny Singhal, Pramod Kumar, Sumitabh Singh, Srishti Saha, Aparajit Ballav Dey
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0038432

Evolution of Fruit Traits in Ficus Subgenus Sycomorus (Moraceae): To What Extent Do Frugivores Determine Seed Dispersal Mode?
Cited by: 20
Author(s): Rhett D. Harrison, Nina Rønsted, Xu Liu, Jean‐Yves Rasplus, Astrid Cruaud
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0237716

Concealment of juvenile bull trout in response to temperature, light, and substrate: Implications for detection
Cited by: 0
Author(s): Russell F. Thurow, James T. Peterson, Gwynne L. Chandler, Christine M. Moffitt, T. C. Bjornn
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0140640

Patterns of Natural and Human-Caused Mortality Factors of a Rare Forest Carnivore, the Fisher (Pekania pennanti) in California
Cited by: 38
Author(s): Mourad W. Gabriel, Leslie W. Woods, Greta M. Wengert, Nicole Stephenson, J. Mark Higley, Craig M. Thompson, Sean M. Matthews, Richard A. Sweitzer, Kathryn L. Purcell, Reginald H. Barrett, Simone Keller, Patricia M. Gaffney, Megan A. Jones, Robert H. Poppenga, Janet E. Foley, Richard N. Brown, Deana L. Clifford, Benjamin N. Sacks
Software Mentions: 1
Published: almost 11 years ago

10.3390/foods10010071

Discrete Choice Analysis of Consumer Preferences for Meathybrids—Findings from Germany and Belgium
Cited by: 22
Author(s): Adriano Profeta, Marie-Christin Baune, Sergiy Smetana, Keshia Broucke, Geert Van Royen, Jochen Weiß, Volker Heinz, Nino Terjung
Software Mentions: 1
Published: over 5 years ago

10.1186/s12920-017-0284-z

In silico identification of potential key regulatory factors in smoking-induced lung cancer
Cited by: 24
Author(s): Salem A. El-aarag, Amal Mahmoud, Medhat H. Hashem, Hatem Abd Elkader, Alaa A. Hemeida, Mahmoud ElHefnawi
Software Mentions: 1
Published: about 9 years ago

10.1007/s11136-012-0189-4

Mapping analyses to estimate EQ-5D utilities and responses based on Oxford Knee Score
Cited by: 51
Author(s): Helen Dakin, Alastair Gray, David Murray
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2288-12-138

Simulation evaluation of statistical properties of methods for indirect and mixed treatment comparisons
Cited by: 71
Author(s): Fujian Song, Allan Clark, Max Bachmann, Jim Maas
Software Mentions: 1
Published: almost 14 years ago

10.1186/s12891-017-1682-2

Objective impairments of gait and balance in adults living with HIV-1 infection: a systematic review and meta-analysis of observational studies
Cited by: 35
Author(s): Karina Berner, Linzette Morris, Jochen Baumeister, Quinette Louw
Software Mentions: 1
Published: about 9 years ago

10.1128/AAC.00279-19

Fluoroquinolones in Drug-Resistant Tuberculosis: Culture Conversion and Pharmacokinetic/Pharmacodynamic Target Attainment To Guide Dose Selection
Cited by: 14
Author(s): Mohammad H. Al‐Shaer, Wael Alghamdi, Abdullah Alsultan, Guohua An, Shahriar Ahmed, Yosra Alkabab, Sayera Banu, Ketevan Barbakadze, Eric R. Houpt, Maia Kipiani, Lali Mikiashvili, J. Peter Cegielski, Russell R. Kempker, Scott K Heysell, Charles A. Peloquin
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-018-5009-y

Analysis of porcine body size variation using re-sequencing data of miniature and large pigs
Cited by: 11
Author(s): Christian Reimer, Carl-Johan Rubin, Ahmad Sharifi, Ngoc Thuy Ha, Steffen Weigend, K.-H. Waldmann, O. Distl, Sameer D. Pant, Merete Fredholm, Martin Schlather, Henner Simianer
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0178763

Sequence homology between HLA-bound cytomegalovirus and human peptides: A potential trigger for alloreactivity
Cited by: 9
Author(s): Charles A. Hall, Vishal N. Kopardé, Maximilian Jameson-Lee, Abdelrhman Elnasseh, Allison F. Scalora, David J. Kobulnicky, Myrna G. Serrano, Catherine Roberts, Gregory A. Buck, Michael C. Neale, Daniel E. Nixon, Amir A. Toor
Software Mentions: 1
Published: about 9 years ago

10.3390/molecules23081966

16-Hydroxycleroda-3,13-dien-15,16-olide and N-Methyl-Actinodaphine Potentiate Tamoxifen-Induced Cell Death in Breast Cancer
Cited by: 6
Author(s): Bharath Kumar Velmurugan, Po-Chih Wang, Ching‐Feng Weng
Software Mentions: 1
Published: about 8 years ago

10.3390/molecules20034071

Synthesis, Antifungal Activity and QSAR of Some Novel Carboxylic Acid Amides
Cited by: 20
Author(s): Shaowu Du, Huizhe Lu, Dongyan Yang, Hong Li, Xilin Gu, Chuan Wan, Changqing Jia, Mian Wang, Xiuyun Liu, Zhaohai Qin
Software Mentions: 1
Published: over 11 years ago

10.3390/molecules23061297

Beneficial Effects of Green Tea Catechins on Neurodegenerative Diseases
Cited by: 152
Author(s): Monira Pervin, Keiko Unno, Tomokazu Ohishi, Hiroki Tanabe, Noriyuki Miyoshi, Yoriyuki Nakamura
Software Mentions: 1
Published: about 8 years ago

10.3390/molecules24162978

Characterization of the Key Aroma Compounds in Marselan Wine by Gas Chromatography-Olfactometry, Quantitative Measurements, Aroma Recombination, and Omission Tests
Cited by: 30
Author(s): Jiaheng Lyu, Yue Ma, Yan Xu, Yao Nie, Ke Tang
Software Mentions: 1
Published: about 7 years ago

10.3390/molecules23010148

Current NMR Techniques for Structure-Based Drug Discovery
Cited by: 84
Author(s): Toshihiko Sugiki, Kyoko Furuita, Toshimichi Fujiwara, Chojiro Kojima
Software Mentions: 1
Published: over 8 years ago

10.3389/fchem.2018.00105

Peptide Modified ZnO Nanoparticles as Gas Sensors Array for Volatile Organic Compounds (VOCs)
Cited by: 38
Author(s): Marcello Mascini, Sara Gaggiotti, Flavio Della Pelle, Corrado Di Natale, Sinazo Qakala, Emmanuel I. Iwuoha, Paola Pittia, Darío Compagnone
Software Mentions: 1
Published: over 8 years ago

10.1186/s13024-016-0129-9

A Christianson syndrome-linked deletion mutation (∆287ES288) in SLC9A6 disrupts recycling endosomal function and elicits neurodegeneration and cell death
Cited by: 22
Author(s): Alina Ilie, Andy Gao, Jonathan P. Reid, Annie Boucher, Cassandra McEwan, Hervé Barrière, Gergely L. Lukacs, R. Anne McKinney, John Orlowski
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmolb.2017.00101

Computational Study of PCSK9-EGFA Complex with Effective Polarizable Bond Force Field
Cited by: 3
Author(s): Jian Chen, Lili Duan, Changge Ji, John Z. H. Zhang
Software Mentions: 1
Published: over 8 years ago

10.3389/fnmol.2018.00347

Modification of a Putative Third Sodium Site in the Glycine Transporter GlyT2 Influences the Chloride Dependence of Substrate Transport
Cited by: 14
Author(s): Cristina Benito-Muñoz, Almudena Perona, David Abia, Helena Santos, Enrique Núñez, Carmen Aragón, Beatriz Lopez‐Corcuera
Software Mentions: 1
Published: almost 8 years ago

10.3389/fnins.2019.00008

In Praise of Artifice Reloaded: Caution With Natural Image Databases in Modeling Vision
Cited by: 11
Author(s): Marina Martínez-Garcia, Marcelo Bertalmío, Jesús Malo
Software Mentions: 1
Published: over 7 years ago

10.3389/fonc.2020.00971

ULBP1 Is Elevated in Human Hepatocellular Carcinoma and Predicts Outcome
Cited by: 10
Author(s): Nicholas Easom, Michael Marks, Dawda Jobe, Roopinder Gillmore, Tim Meyer, Mala K. Maini, Ramou Njie
Software Mentions: 1
Published: about 6 years ago

10.3389/fphar.2019.01582

Identification of a Selective PDE4B Inhibitor From Bryophyllum pinnatum by Target Fishing Study and In Vitro Evaluation of Quercetin 3-O-α-L-Arabinopyranosyl-(1→2)-O-α-L-Rhamnopyranoside
Cited by: 9
Author(s): Estela Mariana Guimarães Lourenço, Júlia Morais Fernandes, Vinícius F. Carvalho, Raphaë͏l Grougnet, Marco A. Martins, Alessandro K. Jordão, Silvana Maria Zucolotto, Euzébio Guimarães Barbosa
Software Mentions: 1
Published: over 6 years ago

10.3390/v12010024

Dendritic Cells in HIV/SIV Prophylactic and Therapeutic Vaccination
Cited by: 9
Author(s): Eunju Ko, Marjorie Robert-Guroff
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2021.701568

Evaluation of the IKKβ Binding of Indicaxanthin by Induced-Fit Docking, Binding Pose Metadynamics, and Molecular Dynamics
Cited by: 20
Author(s): Mario Allegra, Marco Tutone, Luisa Tesoriere, Alessandro Attanzio, Giulia Culletta, Anna Maria Almerico
Software Mentions: 1
Published: almost 5 years ago

10.3389/fphar.2019.00345

Importance of Incorporating Protein Flexibility in Molecule Modeling: A Theoretical Study on Type I1/2 NIK Inhibitors
Cited by: 11
Author(s): Chao Shen, Hui Liu, Xuwen Wang, Tailong Lei, Ercheng Wang, Lei Xu, Huidong Yu, Dan Li, Xiaojun Yao
Software Mentions: 1
Published: over 7 years ago

10.3389/fpsyt.2013.00071

Meditative Movement for Depression and Anxiety
Cited by: 80
Author(s): Peter Payne, Mardi A. Crane-Godreau
Software Mentions: 1
Published: over 13 years ago

10.1016/j.heliyon.2018.e01021

Drug discovery of anticancer drugs targeting methylenetetrahydrofolate dehydrogenase 2
Cited by: 22
Author(s): Ayumu Asai, Junichi Koseki, Masamitsu Konno, Tatsunori Nishimura, Noriko Gotoh, Taroh Satoh, Yuichiro Doki, Masaki Mori, Hideshi Ishii
Software Mentions: 1
Published: over 7 years ago

10.1155/2012/579629

Composite Polylactic-Methacrylic Acid Copolymer Nanoparticles for the Delivery of Methotrexate
Cited by: 21
Author(s): Bongani Sibeko, Yahya E. Choonara, Lisa C. du Toit, Girish Modi, Dinesh Naidoo, Riaz Khan, Pradeep Kumar, Valence M. K. Ndesendo, Sunny E. Iyuke, Viness Pillay
Software Mentions: 1
Published: about 14 years ago

10.3390/polym12040881

Hydrogen Bonding in a l-Glutamine-Based Polyamidoamino Acid and its pH-Dependent Self-Ordered Coil Conformation
Cited by: 4
Author(s): F. Lazzari, Amedea Manfredi, Jenny Alongi, Fabio Ganazzoli, Francesca Vasile, Giuseppina Raffaini, Paolo Ferruti, Elisabetta Ranucci
Software Mentions: 1
Published: over 6 years ago

10.21203/rs.3.rs-871118/v1

The pH Effects on SARS-CoV and SARS-CoV-2 Spike Proteins in the Process of Binding to hACE2
Cited by: 3
Author(s): Yixin Xie, Wenhan Guo, Alan Lopez-Hernadez, Shaolei Teng, Lin Li
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0208411

Late retirement, early careers, and the aging of U.S. science and engineering professors
Cited by: 7
Author(s): Navid Ghaffarzadegan, Ran Xu
Software Mentions: 1
Published: over 7 years ago

10.1186/s12989-014-0065-1

Is the toxic potential of nanosilver dependent on its size?
Cited by: 69
Author(s): Anna Huk, Emilia Izak‐Nau, Bogumiła Reidy, Matthew Boyles, Albert Duschl, Iseult Lynch, Mária Dušinská
Software Mentions: 1
Published: over 11 years ago

10.3389/pore.2021.598460

Rac3 Expression and its Clinicopathological Significance in Patients With Bladder Cancer
Cited by: 12
Author(s): Mei Chen, Zhenyu Nie, Hui Cao, Yuanhui Gao, Xiaohong Wen, Chong Zhang, Shufang Zhang
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.9267

Potential of rice straw biochar, sulfur and ryegrass (<i>Lolium perenne</i> L.) in remediating soil contaminated with nickel through irrigation with untreated wastewater
Cited by: 27
Author(s): Inas A. Hashem, Aonalah Y. Abbas, Abo El-Nasr H. Abd El-Hamed, Haythum M.S. Salem, Omr E.M. El-Hosseiny, Mohamed Abdelsalam, Muhammad Hamzah Saleem, Wenbing Zhou, Ronggui Hu
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.6177

Social network analysis for the assessment of pig, cattle and buffalo movement in Xayabouli, Lao PDR
Cited by: 10
Author(s): Chaithep Poolkhet, Suwicha Kasemsuwan, Sithong Phiphakhavong, Intha Phouangsouvanh, Khamphouth Vongxay, Man Sub Shin, Wantanee Kalpravidh, Jan B. Hinrichs
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.5413

Roads affect the spatial structure of butterfly communities in grassland patches
Cited by: 4
Author(s): Piotr Skórka, Magdalena Lenda, Dawid Moroń
Software Mentions: 1
Published: about 8 years ago

10.7717/peerj.6280

A new testudinoid turtle from the middle to late Eocene of Vietnam
Cited by: 12
Author(s): Rafaella C Garbin, Madelaine Böhme, Walter G. Joyce
Software Mentions: 1
Published: over 7 years ago

10.1038/srep18987

Discovering new mTOR inhibitors for cancer treatment through virtual screening methods and in vitro assays
Cited by: 37
Author(s): Ling Wang, Lei Chen, Miao Yu, Lihui Xu, Bao Cheng, Yongsheng Lin, Qiong Gu, Xian-Hui He, Jing Xu
Software Mentions: 1
Published: over 10 years ago

10.7717/peerj.11953

Non-linear genetic diversity and notable population differentiation caused by low gene flow of bermudagrass [<i>Cynodon dactylon</i> (L.) Pers.] along longitude gradients
Cited by: 1
Author(s): Jing-Xue Zhang, Miaoli Wang, Jibiao Fan, Zhipeng Guo, Yongzhuo Guan, Guoqiang Qu, Chuanjie Zhang, Yuxia Guo, Xuebing Yan
Software Mentions: 1
Published: about 5 years ago

10.1038/srep31418

Understanding the molecular basis of substrate binding specificity of PTB domains
Cited by: 7
Author(s): Neetu Sain, Garima Tiwari, Debasisa Mohanty
Software Mentions: 1
Published: about 10 years ago

10.1038/srep37584

Cas9-catalyzed DNA Cleavage Generates Staggered Ends: Evidence from Molecular Dynamics Simulations
Cited by: 96
Author(s): Zhicheng Zuo, Jin Liu
Software Mentions: 1
Published: over 9 years ago

10.1038/srep42223

Effect of polarization on HIV-1protease and fluoro-substituted inhibitors binding energies by large scale molecular dynamics simulations
Cited by: 17
Author(s): Li L. Duan, Tong Zhu, Yu C. Li, Qing G. Zhang, John Z. H. Zhang
Software Mentions: 1
Published: over 9 years ago

10.1038/srep46547

Revealing inhibition difference between PFI-2 enantiomers against SETD7 by molecular dynamics simulations, binding free energy calculations and unbinding pathway analysis
Cited by: 22
Author(s): Yuzhen Niu, Danfeng Shi, Lanlan Li, Jingyun Guo, Huanxiang Liu, Xiaojun Yao
Software Mentions: 1
Published: over 9 years ago

10.14814/phy2.14508

Prominin‐1‐expressing hepatic progenitor cells induce fibrogenesis in murine cholestatic liver injury
Cited by: 7
Author(s): Michael Fenlon, Celia Short, Jiabo Xu, Nicolas Malkoff, Elaa Mahdi, Michelle Hough, Alison Glazier, Calvin Lee, Kinji Asahina, Kasper S. Wang
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-26812-8

An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12
Cited by: 18
Author(s): Chen Keasar, McGuffin Lj, Björn Wallner, Gaurav Chopra, Badri Adhikari, Debswapna Bhattacharya, Linda Blake, Bortot Lo, Ruibing Cao, Dhanasekaran Bk, Isabel Dórdio Dimas, Faccioli Ra, Eshel Faraggi, Robert Ganzynkowicz, Soma Ghosh, Artur Giełdoń, Łukasz Golon, Yiliang He, Lim Heo, Jing Hou, Muhammad Usman Ghani Khan, Firas Khatib, Khoury Ga, Chris A. Kieslich, Kim De, Paweł Krupa, Lee Gr, Li H, Jian Li, Agnieszka G. Lipska, Adam Liwo, Maghrabi Aha, Milot Mirdita, Shokoufeh Mirzaei, Magdalena A. Mozolewska, Melis Onel, С. Г. Овчинников, Akash Shah, Urvi Shah, Tomer Sidi, Adam K. Sieradzan, Magdalena J. Ślusarz, Rafał Ślusarz, James B. Smadbeck, Phanourios Tamamis, N Trieber, Tomasz Wirecki, Yuan‐Qi Yin, Y Zhang, Jaume Bacardit, Maciej Baranowski, Nicola H. Chapman, Seth Cooper, Alexandre Defelicibus, Jeff Flatten, Brian Koepnick, Zoran Popović, Bartłomiej Zaborowski, David Baker, Jianlin Cheng, Cezary Czaplewski, Acb Delbem, Christodoulos A. Floudas, A. Kloczkowski, Stanisław Ołdziej, Michael Levitt, Harold A. Scheraga, Chaok Seok, Johannes Söding, S. Vishveshwara, Xu D, Crivelli Sn
Software Mentions: 1
Published: about 8 years ago

10.3390/plants9111467

Nutrient Diagnosis of Fertigated “Prata” and “Cavendish” Banana (Musa spp.) at Plot-Scale
Cited by: 14
Author(s): Antonio João de Lima Neto, José Aridiano Lima de Deus, Vagner Alves Rodrigues Filho, William Natale, Léon E. Parent
Software Mentions: 1
Published: almost 6 years ago

10.3390/plants9020222

Comparative Inner Morphological and Chemical Studies on Reynoutria Species in Korea
Cited by: 5
Author(s): Atif Ali Khan Khalil, Kazi-Marjahan Akter, Hye-Jin Kim, Woo Sung Park, Dong-Min Kang, Kyung Ah Koo, Mi‐Jeong Ahn
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-51676-x

The “MYOCYTER” – Convert cellular and cardiac contractions into numbers with ImageJ
Cited by: 21
Author(s): Tilman Grune, Christiane Ott, Steffen Häseli, Annika Höhn, Tobias Jung
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-020-61494-1

Accelerated identification of serine racemase inhibitor from Centella asiatica
Cited by: 8
Author(s): Komal Rani, Mitali Tyagi, Mohit Mazumder, Akanksha Singh, Annaian Shanmugam, Krishna Dalal, M. Armugam Pillai, S. Gourinath, Saroj Kumar, Alagiri Srinivasan
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1000145

Intramolecular Cohesion of Coils Mediated by Phenylalanine–Glycine Motifs in the Natively Unfolded Domain of a Nucleoporin
Cited by: 49
Author(s): Viswanathan V Krishnan, Edmond Y. Lau, Justin Yamada, Daniel P. Denning, Samir S. Patel, Michael E. Colvin, Michael Rexach
Software Mentions: 1
Published: about 18 years ago

10.1371/journal.pcbi.1003368

Structural Control of Metabolic Flux
Cited by: 10
Author(s): Max Sajitz-Hermstein, Zoran Nikoloski
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-021-86712-2

Computational drug repurposing study elucidating simultaneous inhibition of entry and replication of novel corona virus by Grazoprevir
Cited by: 22
Author(s): Santosh Kumar Behera, Nazmina Vhora, Darshan Contractor, Amit Shard, Dinesh Kumar, Kiran Kalia, Alok Jain
Software Mentions: 1
Published: over 5 years ago