10.1371/journal.pone.0247854

CoViD-19, learning from the past: A wavelet and cross-correlation analysis of the epidemic dynamics looking to emergency calls and Twitter trends in Italian Lombardy region
Cited by: 10
Author(s): Bruno Alessandro Rivieccio, Alessandra Micheletti, Manuel Maffeo, Matteo Zignani, Alessandro Comunian, Federica Nicolussi, Silvia Salini, Giancarlo Manzi, F. Auxilia, M. Giudici, Giovanni Naldi, Sabrina Gaito, Silvana Castaldi, Elia Biganzoli
Software Mentions: 3
Published: over 5 years ago

10.1093/gigascience/giy084

SL-quant: a fast and flexible pipeline to quantify spliced leader trans-splicing events from RNA-seq data
Cited by: 11
Author(s): Carlo Yague-Sanz, Damien Hermand
Software Mentions: 3
Published: about 8 years ago

10.1186/s13643-015-0014-6

Insertion torque recordings for the diagnosis of contact between orthodontic mini-implants and dental roots: protocol for a systematic review
Cited by: 12
Author(s): Reint Meursinge Reynders, Luisa Ladu, Laura Ronchi, Nicola Di Girolamo, Jan de Lange, Nia Roberts, Annette Plüddemann
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pone.0236684

Distinct patterns of activity in individual cortical neurons and local networks in primary somatosensory cortex of mice evoked by square-wave mechanical limb stimulation
Cited by: 2
Author(s): Mischa V Bandet, Bin Dong, Ian R. Winship
Software Mentions: 3
Published: over 5 years ago

10.1177/23813377211027556

Wag the Dog: A Digital Literacies Narrative
Cited by: 4
Author(s): Elizabeth A. Baker
Software Mentions: 3
Published: about 5 years ago

10.1186/s12969-018-0265-6

Proceedings of the 25th European Paediatric Rheumatology Congress (PReS 2018)
Cited by: 27
Author(s):
Software Mentions: 3
Published: about 8 years ago

10.1186/s13072-019-0276-7

Ovarian dysfunction following prenatal exposure to an insecticide, chlordecone, associates with altered epigenetic features
Cited by: 16
Author(s): Louis Legoff, Ouzna Dali, Shereen Cynthia D’Cruz, Antonio Suglia, Aurore Gély-Pernot, Chloé Hémery, Pierre-Yves Kernanec, Abbassia Demmouche, Christine Kervarrec, Sergei G. Tevosian, Luc Multigner, Fátima Smagulova
Software Mentions: 3
Published: over 7 years ago

10.1007/s10822-014-9720-8

Efficient calculation of SAMPL4 hydration free energies using OMEGA, SZYBKI, QUACPAC, and Zap TK
Cited by: 13
Author(s): Benjamin A. Ellingson, Matthew T. Geballe, S. Włodek, Christopher I. Bayly, A. Geoffrey Skillman, Anthony Nicholls
Software Mentions: 3
Published: over 12 years ago

10.1007/s12559-017-9536-7

Evaluating Integration Strategies for Visuo-Haptic Object Recognition
Cited by: 12
Author(s): Sibel Toprak, Nicolás Navarro-Guerrero, Stefan Wermter
Software Mentions: 3
Published: over 8 years ago

10.1186/s13643-017-0529-0

Telephone consultations for general practice: a systematic review
Cited by: 130
Author(s): Martin Downes, Merehau Cindy Mervin, Joshua Byrnes, Paul Anthony Scuffham
Software Mentions: 3
Published: about 9 years ago

10.7717/peerj.603

GroopM: an automated tool for the recovery of population genomes from related metagenomes
Cited by: 228
Author(s): Michael Imelfort, Donovan H. Parks, Ben J. Woodcroft, Paul G. Dennis, Philip Hugenholtz, Gene W. Tyson
Software Mentions: 3
Published: almost 12 years ago

10.2174/138920209789177575

Hidden Markov Models and their Applications in Biological Sequence Analysis
Cited by: 247
Author(s): Byung-Jun Yoon
Software Mentions: 3
Published: almost 17 years ago

10.1186/s12862-015-0358-5

The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record
Cited by: 167
Author(s): Allison Y. Hsiang, Daniel J. Field, Timothy H. Webster, Adam D.B. Behlke, Matthew Davis, Rachel A. Racicot, Jacques A. Gauthier
Software Mentions: 3
Published: about 11 years ago

10.7554/eLife.37621

Strong biomechanical relationships bias the tempo and mode of morphological evolution
Cited by: 34
Author(s): Martha M. Muñoz, Yinan Hu, Philip S. L. Anderson, S. N. Patek
Software Mentions: 3
Published: about 8 years ago

10.1186/1471-2164-15-148

Improving transcriptome construction in non-model organisms: integrating manual and automated gene definition in Emiliania huxleyi
Cited by: 30
Author(s): Ester Feldmesser, Shilo Rosenwasser, Assaf Vardi, Shifra Ben‐Dor
Software Mentions: 3
Published: over 12 years ago

10.5195/jmla.2018.283

A systematic approach to searching: an efficient and complete method to develop literature searches
Cited by: 247
Author(s): Wichor M. Bramer, Gerdien B. de Jonge, Melissa L. Rethlefsen, F. Mast, Jos Kleijnen
Software Mentions: 3
Published: almost 8 years ago

10.1111/imm.13248

The cytotoxic molecule granulysin is capable of inducing either chemotaxis or fugetaxis in dendritic cells depending on maturation: a role for V<i>δ</i>2⁺<i>γδ</i> T cells in the modulation of immune response to tumour?
Cited by: 8
Author(s): Emma L Sparrow, Daniel Fowler, Joe R Fenn, Jonathan Caron, John Copier, Angus Dalgleish, Mark Bodman‐Smith
Software Mentions: 3
Published: almost 6 years ago

10.1186/s13321-019-0403-2

CyBy2: a strongly typed, purely functional framework for chemical data management
Cited by: 0
Author(s): Stefan Höck, Rainer Riedl
Software Mentions: 3
Published: over 6 years ago

10.1186/s12915-020-0744-3

A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici
Cited by: 80
Author(s): Thomas Badet, Ursula Oggenfuss, Leen Nanchira Abraham, Bruce A. McDonald, Daniel Croll
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2105-10-S1-S4

SE: an algorithm for deriving sequence alignment from a pair of superimposed structures
Cited by: 7
Author(s): Chin‐Hsien Tai, James J. Vincent, Changhoon Kim, Byung Kook Lee
Software Mentions: 3
Published: over 17 years ago

10.1371/journal.pone.0208901

The sequencing and interpretation of the genome obtained from a Serbian individual
Cited by: 3
Author(s): Wazim Mohammed Ismail, Kymberleigh A. Pagel, Vikas Pejaver, Simo V. Zhang, Sofía Casasa, Matthew Mort, David Neil Cooper, Matthew W. Hahn, Predrag Radivojac
Software Mentions: 3
Published: over 7 years ago

10.1111/j.1742-4658.2011.08320.x

Crystal structure of Onconase at 1.1 Å resolution – insights into substrate binding and collective motion
Cited by: 13
Author(s): Daniel E. Holloway, Umesh Singh, Kuslima Shogen, K. Ravi Acharya
Software Mentions: 3
Published: almost 15 years ago

10.1371/journal.pone.0252245

Rationale and validation of a novel mobile application probing motor inhibition: Proof of concept of CALM-IT
Cited by: 1
Author(s): Elise M. Cardinale, Reut Naim, Simone P. Haller, Ramaris E. German, Christian Botz-Zapp, Jessica Bezek, David C. Jangraw, Melissa A. Brotman
Software Mentions: 3
Published: about 5 years ago

10.1186/s40168-021-01065-2

Parabacteroides produces acetate to alleviate heparanase-exacerbated acute pancreatitis through reducing neutrophil infiltration
Cited by: 73
Author(s): Yuanyuan Lei, Li Tang, Shuang Liu, Shiping Hu, Ling-Yi Wu, Yaojiang Liu, Min Ye, Shengjie Huang, Xuefeng Tang, Tao Tang, Xiao‐Fan Zhao, Israël Vlodavsky, Shuo Zeng, Bo Tang, Shiming Yang
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-38744-y

Sources and selection of snow-specific microbial communities in a Greenlandic sea ice snow cover
Cited by: 27
Author(s): Lorrie Maccario, Shelly D. Carpenter, Jody W. Deming, Timothy M. Vogel, Catherine Larose
Software Mentions: 3
Published: over 7 years ago

10.3389/fgene.2020.00101

Skewed X-Chromosome Inactivation and Compensatory Upregulation of Escape Genes Precludes Major Clinical Symptoms in a Female With a Large Xq Deletion
Cited by: 15
Author(s): Cíntia Barros Santos-Rebouças, Raquel Boy, Evelyn Quintanilha Vianna, Andressa Pereira Gonçalves, Rafael Mina Piergiorge, Bianca Barbosa Abdala, J. M. Santos, Veluma Calassara, Filipe Brum Machado, Enrique Medina‐Acosta, Márcia Mattos Gonçalves Pimentel
Software Mentions: 3
Published: over 6 years ago

10.3390/insects11090634

Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
Cited by: 4
Author(s): Ruslan Deviatiiarov, R. T. Ayupov, Alexander Laikov, Elena Shagimardanova, Takahiro Kikawada, Oleg Gusev
Software Mentions: 3
Published: almost 6 years ago

10.1107/S160057671600995X

<i>WavePropaGator</i>: interactive framework for X-ray free-electron laser optics design and simulations
Cited by: 25
Author(s): Liubov Samoylova, A. V. Buzmakov, Oleg Chubar, H. Sinn
Software Mentions: 3
Published: about 10 years ago

10.3389/fcell.2020.00386

1Q12 Loci Movement in the Interphase Nucleus Under the Action of ROS Is an Important Component of the Mechanism That Determines Copy Number Variation of Satellite III (1q12) in Health and Schizophrenia
Cited by: 9
Author(s): Marina S. Konkova, Elizaveta S. Ershova, Ekaterina A. Savinova, Elena M. Malinovskaya, Galina Shmarina, А. В. Мартынов, Roman V. Veiko, Natalia V. Zakharova, Pavel E. Umriukhin, G. P. Kostyuk, В. Л. Ижевская, Sergey I. Kutsev, Natalia N. Veiko, Svetlana V. Kostyuk
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0093628

Lifespan Analyses of Forest Raptor Nests: Patterns of Creation, Persistence and Reuse
Cited by: 18
Author(s): María V. Jiménez‐Franco, José Antonio Martínez, José F. Calvo
Software Mentions: 3
Published: over 12 years ago

10.3389/fpsyg.2020.01683

Mindfulness, Compassion, and Self-Compassion Among Health Care Professionals: What's New? A Systematic Review
Cited by: 90
Author(s): Ciro Conversano, Rebecca Ciacchini, Graziella Orrù, Mariagrazia Di Giuseppe, Angelo Gemignani, Andrea Poli
Software Mentions: 3
Published: about 6 years ago

10.1007/s00330-020-06921-7

Calcium scoring: a personalized probability assessment predicts the need for additional or alternative testing to coronary CT angiography
Cited by: 9
Author(s): Judit Simon, Lili Száraz, Bálint Szilveszter, Alexisz Panajotu, Ádám L. Jermendy, Andrea Bartykowszki, Melinda Boussoussou, Borbála Vattay, Zsófia Drobni, Béla Merkely, Pál Maurovich-Horvat, Márton Kolossváry
Software Mentions: 3
Published: over 6 years ago

10.1038/srep09207

miRNA in situ hybridization in circulating tumor cells - MishCTC
Cited by: 36
Author(s): Francisco G. Ortega, José A. Lorente, José Luis García Puche, Maria P. Ruiz, Rosario M. Sánchez‐Martín, Diego Pérez, Juan José Díaz‐Mochón, María José Serrano
Software Mentions: 3
Published: over 11 years ago

10.3390/ani11071863

Differential Expression and Functional Analysis of CircRNA in the Ovaries of Low and High Fecundity Hanper Sheep
Cited by: 8
Author(s): Aiju Liu, Xiaoyong Chen, Menghe Liu, Limeng Zhang, Xiaofei Ma, Shujun Tian
Software Mentions: 3
Published: about 5 years ago

10.1093/molbev/msaa305

dadi.CUDA: Accelerating Population Genetics Inference with Graphics Processing Units
Cited by: 13
Author(s): Ryan N. Gutenkunst
Software Mentions: 3
Published: over 5 years ago

10.3390/ijerph18052713

A Real-Time Artificial Intelligence-Assisted System to Predict Weaning from Ventilator Immediately after Lung Resection Surgery
Cited by: 18
Author(s): Ying-Jen Chang, Kuo‐Chuan Hung, Li‐Kai Wang, Chia-Hung Yu, Chao-Kun Chen, Hung-Tze Tay, Jhi-Joung Wang, Chia‐Jung Chen
Software Mentions: 3
Published: over 5 years ago

10.1038/s41398-017-0036-z

Psychiatric polygenic risk associates with cortical morphology and functional organization in aging
Cited by: 6
Author(s): Annie Lee, Mojun Shen, Anqi Qiu
Software Mentions: 3
Published: over 8 years ago

10.3390/jpm11020131

Common Treatment, Common Variant: Evolutionary Prediction of Functional Pharmacogenomic Variants
Cited by: 6
Author(s): Laura B. Scheinfeldt, Andrew Brangan, Dara Kusic, Sudhir Kumar, Neda Gharani
Software Mentions: 3
Published: over 5 years ago

10.1002/2211-5463.13207

The mitochondrial fission factor FIS1 promotes stemness of human lung cancer stem cells via mitophagy
Cited by: 11
Author(s): Rachel Liu, Zhiwei Sun, Ting Ye, Jingyuan Li, Bin Zeng, Qiting Zhao, Yunlong Wang, H. Rosie Xing
Software Mentions: 3
Published: about 5 years ago

10.1002/ece3.6043

Fatty acid‐based diet estimates suggest ringed seal remain the main prey of southern Beaufort Sea polar bears despite recent use of onshore food resources
Cited by: 17
Author(s): Jennifer Bourque, Todd C. Atwood, George J. Divoky, Connie Stewart, Melissa A. McKinney
Software Mentions: 3
Published: over 6 years ago

10.1111/ibi.12337

Maximizing dietary information retrievable from carcasses of Great Cormorants <i>Phalacrocorax carbo</i> using a combined morphological and molecular analytical approach
Cited by: 10
Author(s): Johannes Oehm, Bettina Thalinger, Hannes Mayr, Michael Traugott
Software Mentions: 3
Published: over 10 years ago

10.1111/jam.13590

16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria
Cited by: 41
Author(s): George S. Watts, Ken Youens‐Clark, Marvin J. Slepian, Donna M. Wolk, Marc M. Oshiro, Gregory S. Metzger, Dalia Dhingra, Lee D. Cranmer, Bonnie Hurwitz
Software Mentions: 3
Published: almost 9 years ago

10.1038/s41598-020-79082-8

Human extrahepatic and intrahepatic cholangiocyte organoids show region-specific differentiation potential and model cystic fibrosis-related bile duct disease
Cited by: 37
Author(s): Monique M A Verstegen, Floris J.M. Roos, Ksenia Burka, Helmuth Gehart, Myrthe Jager, Maaike de Wolf, Marcel J. C. Bijvelds, Hugo R. de Jonge, Arif Ibrahim Ardisasmita, Nick A. van Huizen, Henk P. Roest, Jeroen de Jonge, Michael Koch, Francesco Pampaloni, Sabine A. Fuchs, Imre F. Schene, Theo M. Luider, Hubert P.J. van der Doef, Frank Bodewes, Ruben H J de Kleine, Bart Spee, Gert‐Jan Kremers, Hans Clevers, Jan N. M. IJzermans, Edwin Cuppen, Luc J. W. van der Laan
Software Mentions: 3
Published: over 5 years ago

10.2196/jmir.3692

“Friending” Teens: Systematic Review of Social Media in Adolescent and Young Adult Health Care
Cited by: 161
Author(s): Lael M. Yonker, Shiyi Zan, Christina V. Scirica, Kamal Jethwani, T. Bernard Kinane
Software Mentions: 3
Published: over 11 years ago

10.1186/s13059-020-1938-2

Nanopore sequencing-based genome assembly and evolutionary genomics of circum-basmati rice
Cited by: 69
Author(s): Jae Young Choi, Zoe N. Lye, Simon C. Groen, Xiaofeng Dai, Priyesh Rughani, Sophie Zaaijer, Eoghan Harrington, Sissel Juul, Michael D. Purugganan
Software Mentions: 3
Published: over 6 years ago

10.1186/s12859-016-1292-2

Integration of metabolomics, lipidomics and clinical data using a machine learning method
Cited by: 45
Author(s): Animesh Acharjee, Zsuzsanna Ament, James A. West, Elizabeth Stanley, Julian L. Griffin
Software Mentions: 3
Published: almost 10 years ago

10.1186/s13104-021-05573-0

Wellmap: a file format for microplate layouts
Cited by: 0
Author(s): Kale Kundert
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0235422

Non-specific protection from respiratory tract infections in cattle generated by intranasal administration of an innate immune stimulant
Cited by: 8
Author(s): William H. Wheat, Lyndah Chow, Vanessa Rozo, Julia A. Herman, Kelly Still Brooks, Aimée C. Colbath, R.L. Hunter, Steven Dow
Software Mentions: 3
Published: about 6 years ago

10.1186/1471-2164-13-361

Quantitative RNA-Seq analysis in non-model species: assessing transcriptome assemblies as a scaffold and the utility of evolutionary divergent genomic reference species
Cited by: 85
Author(s): Emily A. Hornett, Christopher W. Wheat
Software Mentions: 3
Published: over 14 years ago

10.1155/2016/1562041

Transcript Polymorphism Rates in Soybean Seed Tissue Are Increased in a Single Transformant of Glycine max
Cited by: 2
Author(s): Kevin Lambirth, Adam M. Whaley, Jessica A. Schlueter, Kenneth J. Piller, Kenneth L. Bost
Software Mentions: 3
Published: over 9 years ago

10.3390/ijms21020547

Open Data for Differential Network Analysis in Glioma
Cited by: 8
Author(s): Claire Jean-Quartier, Fleur Jeanquartier, Andreas Holzinger
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0232774

The effectiveness of smoking cessation, alcohol reduction, diet and physical activity interventions in changing behaviours during pregnancy: A systematic review of systematic reviews
Cited by: 18
Author(s): Nicola Heslehurst, Louise Hayes, Dan Jones, James Newham, Joan Olajide, Louise A. McLeman, Catherine McParlin, Caroline De Brún, Liane B. Azevedo
Software Mentions: 3
Published: about 6 years ago

10.1161/STROKEAHA.118.020811

Genetic Study of White Matter Integrity in UK Biobank (N=8448) and the Overlap With Stroke, Depression, and Dementia
Cited by: 58
Author(s): Loes C.A. Rutten-Jacobs, Daniel J. Tozer, Marco Duering, Rainer Malik, Martin Dichgans, Hugh S. Markus, Matthew Traylor
Software Mentions: 3
Published: about 8 years ago

10.1038/s41598-018-31031-2

Cytochrome C oxidase Inhibition and Cold Plasma-derived Oxidants Synergize in Melanoma Cell Death Induction
Cited by: 37
Author(s): Rajesh Kumar Gandhirajan, Katrin Rödder, Yana Bodnar, Gabriella Pasqual-Melo, Steffen Emmert, Corinne E. Griguer, Klaus‐Dieter Weltmann, Sander Bekeschus
Software Mentions: 3
Published: almost 8 years ago

10.1002/2211-5463.13147

Dapagliflozin reverses the imbalance of T helper 17 and T regulatory cells by inhibiting SGK1 in a mouse model of diabetic kidney disease
Cited by: 15
Author(s): Dan Wang, Zikun Zhang, Zekun Si, Yanlin Yang, Shuangshuang Li, Yan Xue
Software Mentions: 3
Published: over 5 years ago

10.1111/jcmm.16750

Identification and characterization of N6‐methyladenosine modification of circRNAs in glioblastoma
Cited by: 8
Author(s): Yuhao Zhang, Xiuchao Geng, Jintao Xu, Qiang Li, Liangchao Hao, Zhaomu Zeng, Menglin Xiao, Jia Song, Fulin Liu, Chuan Fang, Hong Wang
Software Mentions: 3
Published: about 5 years ago

10.1002/2211-5463.12684

<i>S</i> ‐allyl‐ <scp>l</scp> ‐cysteine (SAC) protects hepatocytes from alcohol‐induced apoptosis
Cited by: 13
Author(s): Peng Chen, Mei Chen Hu, Feng Liu, Henghai Yu, Chen Chen
Software Mentions: 3
Published: about 7 years ago

10.1186/s12874-021-01295-w

Quality assessment tools used in systematic reviews of in vitro studies: A systematic review
Cited by: 35
Author(s): Linh Tran, Dao Ngoc Hien Tam, Abdelrahman Elshafay, Thao Dang, Kenji Hirayama, Nguyen Tien Huy
Software Mentions: 3
Published: over 5 years ago

10.2196/28328

Biannual Differences in Interest Peaks for Web Inquiries Into Ear Pain and Ear Drops: Infodemiology Study
Cited by: 1
Author(s): Faris F. Brkic, Gerold Besser, Martin Schally, Elisabeth M Schmid, Thomas Parzefall, Dominik Riss, David T. Liu
Software Mentions: 3
Published: about 5 years ago

10.1186/1471-2180-9-255

Proteome analysis of Aspergillus niger: Lactate added in starch-containing medium can increase production of the mycotoxin fumonisin B2 by modifying acetyl-CoA metabolism
Cited by: 50
Author(s): Louise Marie Sørensen, René Lametsch, Mikael Rørdam Andersen, Per Væggemose Nielsen, Jens Christian Frisvad
Software Mentions: 3
Published: over 17 years ago

10.1038/s41598-021-89495-8

The SoftWipe tool and benchmark for assessing coding standards adherence of scientific software
Cited by: 6
Author(s): Adrian Zapletal, Dimitri Höhler, Carsten Sinz, Alexandros Stamatakis
Software Mentions: 3
Published: over 5 years ago

10.1186/s12967-021-03083-y

Gene clusters based on OLIG2 and CD276 could distinguish molecular profiling in glioblastoma
Cited by: 1
Author(s): Minjie Fu, Jinsen Zhang, Weifeng Liu, Shan He, Jingwen Zhang, Daniel Tennant, Wei Hua, Ying Mao
Software Mentions: 3
Published: almost 5 years ago

10.1186/s12859-016-1380-3

ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons
Cited by: 24
Author(s): Giovanni Scala, Ornella Affinito, Domenico Palumbo, Ermanno Florio, Antonella Monticelli, Gennaro Miele, Lorenzo Chiariotti, Sérgio Cocozza
Software Mentions: 3
Published: over 9 years ago

10.1002/2211-5463.12581

Differential regulation of brain‐derived neurotrophic factor (BDNF) expression in sensory neuron axons by miRNA‐206
Cited by: 6
Author(s): Shiva Shrestha, Monichan Phay, Hak Hee Kim, Pedram Pouladvand, Seung Joon Lee, Soonmoon Yoo
Software Mentions: 3
Published: over 7 years ago

10.3389/fgene.2014.00277

Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae
Cited by: 14
Author(s): Elena Gómez-Díaz, Ana Rivero, Fabrice Chandre, Victor G. Corcés
Software Mentions: 3
Published: almost 12 years ago

10.3390/cancers12040845

Combination Treatment with Cold Physical Plasma and Pulsed Electric Fields Augments ROS Production and Cytotoxicity in Lymphoma
Cited by: 26
Author(s): Christina M. Wolff, Juergen F. Kolb, Klaus‐Dieter Weltmann, Thomas von Woedtke, Sander Bekeschus
Software Mentions: 3
Published: over 6 years ago

10.3389/fgene.2021.625846

Comprehensive Analysis of Differentially Expressed lncRNA, circRNA and mRNA and Their ceRNA Networks in Mice With Severe Acute Pancreatitis
Cited by: 14
Author(s): Bing Wang, Jun Wu, Qilin Huang, Xiaohui Yuan, Yi Yang, Wen Jiang, Yi Wen, Lijun Tang, Haiyan Sun
Software Mentions: 3
Published: over 5 years ago

10.1186/s13643-020-01331-8

Attachment and relationship-based interventions for families during neonatal intensive care hospitalization: a study protocol for a systematic review and meta-analysis
Cited by: 6
Author(s): Ah. Rim Kim, Soo-Yeon Kim, Ji Eun Yun
Software Mentions: 3
Published: over 6 years ago

10.1002/2211-5463.13212

C188‐9 reduces TGF‐β1‐induced fibroblast activation and alleviates ISO‐induced cardiac fibrosis in mice
Cited by: 3
Author(s): Jiao Liu, Yuxuan Jin, Bei Wang, Jinying Zhang, Shengkai Zuo
Software Mentions: 3
Published: about 5 years ago

10.2196/jmir.1432

Review of Extracting Information From the Social Web for Health Personalization
Cited by: 54
Author(s): Luis Fernández-Luque, Randi Karlsen, Jason Bonander
Software Mentions: 3
Published: over 15 years ago

10.1111/2041-210X.13583

rasterdiv—An Information Theory tailored R package for measuring ecosystem heterogeneity from space: To the origin and back
Cited by: 27
Author(s): Duccio Rocchini, Elisa Thouverai, Matteo Marcantonio, Martina Iannacito, Daniele Da Re, Michele Torresani, Giovanni Bacaro, Manuele Bazzichetto, Alessandra Bernardi, Giles M. Foody, Reinhard Furrer, David Kleijn, Stefano Larsen, Jonathan Lenoir, Marco Malavasi, Elisa Marchetto, Filippo Messori, Alessandro Montaghi, Vítězslav Moudrý, Babak Naimi, Carlo Ricotta, Micol Rossini, Francesco Santi, Maria J. Santos, Michael E. Schaepman, Fabian Schneider, Leila Schuh, S. Silvestri, Petra Šímová, A.K. Skidmore, Clara Tattoni, Enrico Tordoni, Saverio Vicario, Piero Zannini, Martin Wegmann
Software Mentions: 3
Published: over 5 years ago

10.18632/oncotarget.17329

Identification of aberrantly expressed long non-coding RNAs in stomach adenocarcinoma
Cited by: 49
Author(s): Jianbin Gu, Yong Li, Li Fan, Qun Zhao, Bibo Tan, Kelei Hua, Guobin Wu
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0147727

Transcriptomic Determinants of Scrapie Prion Propagation in Cultured Ovine Microglia
Cited by: 12
Author(s): Juan F. Muñoz-Gutiérrez, Sebastián Aguilar Pierlé, David A. Schneider, Timothy V. Baszler, James B. Stanton
Software Mentions: 3
Published: over 10 years ago

10.3389/fgene.2020.568052

Whole-Exome Sequencing of Discordant Monozygotic Twin Families for Identification of Candidate Genes for Microtia-Atresia
Cited by: 7
Author(s): Xinmiao Fan, Ping Lu, Hao Sun, Yu‐Shan Chen, Pu Wang, Tao Liu, Rui Jiang, Xuegong Zhang, Xiaowei Chen
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12916-021-02009-1

Association of statin use in older people primary prevention group with risk of cardiovascular events and mortality: a systematic review and meta-analysis of observational studies
Cited by: 14
Author(s): Kamal Awad, Maged Mohammed, M.M. Zaki, Abdelrahman Ibrahim Abushouk, Gregory Y.H. Lip, Michael J. Blaha, Carl J. Lavie, Peter P. Tóth, J. Wouter Jukema, Naveed Sattar, Maciej Banach
Software Mentions: 3
Published: about 5 years ago

10.1186/s12872-020-01354-y

Relationship between fluoroquinolones and the risk of aortic diseases: a meta-analysis of observational studies
Cited by: 15
Author(s): Xiao Ce Dai, Xin Yang, Lan Ma, Guan Min Tang, Yan Pan, Hui Lin Hu
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2016.01759

Bacterial Genomics Reveal the Complex Epidemiology of an Emerging Pathogen in Arctic and Boreal Ungulates
Cited by: 32
Author(s): Taya Forde, Karin Orsel, Ruth N. Zadoks, Roman Biek, Layne G. Adams, Sylvia Checkley, Tracy Davison, Jeroen De Buck, Mathieu Dumond, Brett Elkin, Laura Finnegan, Bryan Macbeth, Cait Nelson, Amanda Niptanatiak, Shane Sather, Helen Schwantje, Frank van der Meer, Susan Kutz
Software Mentions: 3
Published: almost 10 years ago

10.1371/journal.ppat.1004156

Dynamics of HIV Latency and Reactivation in a Primary CD4+ T Cell Model
Cited by: 71
Author(s): Pejman Mohammadi, Julia di Iulio, Miguel Muñoz, Raquel Martínez, István Bartha, Matthias Cavassini, Christian W. Thorball, Jacques Fellay, Niko Beerenwinkel, Angela Ciuffi, Amalio Telenti
Software Mentions: 3
Published: about 12 years ago

10.3389/fvets.2018.00229

Evaluation of the Performance of the IDvet IFN-Gamma Test for Diagnosis of Bovine Tuberculosis in Spain
Cited by: 12
Author(s): María Luisa de la Cruz, Adam J. Branscum, Jesus Nacar, Enrique Pages, Pilar Pozo, Andrés Perez, Anna Grau, José Luis Sáez, Lucía de Juan, Rosa Díaz, Olga Mínguez, Julio Álvarez
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pgen.1009687

Reduction of Derlin activity suppresses Notch-dependent tumours in the C. elegans germ line
Cited by: 2
Author(s): Ramya Singh, Ryan B Smit, Xin Wang, Chris Wang, Hilary Racher, Dave Hansen
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0022201

A Computational-Experimental Approach Identifies Mutations That Enhance Surface Expression of an Oseltamivir-Resistant Influenza Neuraminidase
Cited by: 50
Author(s): Jesse D. Bloom, Jagannath S. Nayak, David Baltimore
Software Mentions: 3
Published: about 15 years ago

10.1002/2211-5463.12830

Hypoxia potentiates the capacity of melanoma cells to evade cisplatin and doxorubicin cytotoxicity via glycolytic shift
Cited by: 6
Author(s): Ming Zhuo, Falih M. Gorgun, Douglas S. Tyler, Ella W. Englander
Software Mentions: 3
Published: over 6 years ago

10.3389/fonc.2020.01397

Exploring Specific miRNA-mRNA Axes With Relationship to Taxanes-Resistance in Breast Cancer
Cited by: 12
Author(s): Danni Chen, Chang Bao, Feng Zhao, Haogang Yu, Guansheng Zhong, Liang Xu, Senxiang Yan
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0105707

Changes in Cecal Microbiota and Mucosal Gene Expression Revealed New Aspects of Epizootic Rabbit Enteropathy
Cited by: 50
Author(s): Christine Bäuerl, María Carmen Collado, Manuel Zúñiga, E. Blas, Gaspar Pérez‐Martínez
Software Mentions: 3
Published: almost 12 years ago

10.1371/journal.pone.0239385

Multiple drivers of the COVID-19 spread: The roles of climate, international mobility, and region-specific conditions
Cited by: 36
Author(s): Yasuhiro Kubota, Takayuki Shiono, Buntarou Kusumoto, Junichi Fujinuma
Software Mentions: 3
Published: almost 6 years ago

10.1016/j.ebiom.2021.103371

Value of total cholesterol readings earlier versus later in life to predict cardiovascular risk
Cited by: 3
Author(s): Andreas Leiherer, Hanno Ulmer, Axel Muendlein, Christoph H. Saely, Alexander Vonbank, Peter Fraunberger, Bernhard Foeger, Eva-Maria Brandtner, Wolfgang Brozek, Gabriële Nagel, Emanuel Zitt, Heinz Drexel, Hans Concin
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0194036

Allele-specific DNA methylation of disease susceptibility genes in Japanese patients with inflammatory bowel disease
Cited by: 11
Author(s): Hirofumi Chiba, Yoichi Kakuta, Yoshitaka Kinouchi, Yosuke Kawai, Kazuhiro Watanabe, Munenori Nagao, Takeo Naito, Motoyuki Onodera, Rintaro Moroi, Masatake Kuroha, Yoshitake Kanazawa, Tsutomu Kimura, Hisashi Shiga, Katsuya Endo, Kenichi Negoro, Masao Nagasaki, Michiaki Unno, Tooru Shimosegawa
Software Mentions: 3
Published: over 8 years ago

10.1007/s10822-019-00236-6

Electrostatic-field and surface-shape similarity for virtual screening and pose prediction
Cited by: 23
Author(s): Ann E. Cleves, Stephen R. Johnson, Ajay N. Jain
Software Mentions: 3
Published: almost 7 years ago

10.7717/peerj-cs.688

A novel few-shot learning based multi-modality fusion model for COVID-19 rumor detection from online social media
Cited by: 5
Author(s): Hengyang Lu, Fan Cheng, Xiaoning Song, Wei Fang
Software Mentions: 3
Published: almost 5 years ago

10.3390/foods9050652

An Infant Milk Formula Supplemented with Heat-Treated Probiotic Bifidobacterium animalis subsp. lactis CECT 8145, Reduces Fat Deposition in C. elegans and Augments Acetate and Lactate in a Fermented Infant Slurry
Cited by: 13
Author(s): Ángela Silva, Núria González, Ana Terrén, Antonio G. Garcı́a, Juan F. Martínez-Blanch, Vanessa Illescas, Javier Morales, Marcos Maroto, Salvador Genovés, Daniel Ramón, Patricia Martorell, Empar Chenoll
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.ppat.1001328

A Novel Toxoplasma gondii Nuclear Factor TgNF3 Is a Dynamic Chromatin-Associated Component, Modulator of Nucleolar Architecture and Parasite Virulence
Cited by: 36
Author(s): Alejandro Olguin-Lamas, Edwige Madec, Agnès Hovasse, Elisabeth Werkmeister, Isabelle Callebaut, Christian Slomianny, Stéphane Delhaye, Thomas Mouveaux, Christine Schaeffer-Reiss, Alain Van Dorsselaer, Stanislas Tomavo
Software Mentions: 3
Published: over 15 years ago

10.1186/s13643-020-01349-y

Effectiveness and cost-effectiveness of telehealth in rural and remote emergency departments: a systematic review protocol
Cited by: 14
Author(s): Christina Tsou, Suzanne Robinson, James H. Boyd, Andrew Jamieson, Robert Blakeman, Kylie Bosich, Justin Yeung, Stephanie Waters, Delia Hendrie
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.ppat.1008562

High-resolution analysis of Merkel Cell Polyomavirus in Merkel Cell Carcinoma reveals distinct integration patterns and suggests NHEJ and MMBIR as underlying mechanisms
Cited by: 22
Author(s): Manja Czech-Sioli, Thomas Guenther, Marlin Therre, Michael Spohn, Daniela Indenbirken, Juliane Theiß, Sabine Riethdorf, Minyue Qi, Malik Alawi, Corinna Wülbeck, Irene Fernández-Cuesta, Franziska M. Esmek, Jürgen C. Becker, Adam Grundhoff, Nicole Fischer
Software Mentions: 3
Published: almost 6 years ago

10.1186/s13104-016-2099-y

Reliability and validity of the Khmer version of the 10-item Connor-Davidson Resilience Scale (Kh-CD-RISC10) in Cambodian adolescents
Cited by: 18
Author(s): Chanmettachampavieng Duong, Cameron Hurst
Software Mentions: 3
Published: about 10 years ago

10.1136/bmjopen-2020-037847

Do childhood socioeconomic circumstances moderate the association between childhood cognitive ability and all-cause mortality across the life course? Prospective observational study of the 36-day sample of the Scottish Mental Survey 1947
Cited by: 2
Author(s): Matthew H. Iveson, Drew Altschul, Ian J. Deary
Software Mentions: 3
Published: over 5 years ago

10.2196/13485

The Potential of Game-Based Digital Biomarkers for Modeling Mental Health
Cited by: 58
Author(s): Regan L. Mandryk, Max V. Birk
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0095703

Different Relationships between Temporal Phylogenetic Turnover and Phylogenetic Similarity and in Two Forests Were Detected by a New Null Model
Cited by: 4
Author(s): Jiayuan Huang, Jian Zhang, Yong Shen, Juyu Lian, Hong‐Lin Cao, Wanhui Ye, Liang Wu, Yue Bin
Software Mentions: 3
Published: over 12 years ago

10.1534/g3.114.012245

A Saturated Genetic Linkage Map of Autotetraploid Alfalfa (<i>Medicago sativa</i> L.) Developed Using Genotyping-by-Sequencing Is Highly Syntenous with the <i>Medicago truncatula</i> Genome
Cited by: 87
Author(s): Xuehui Li, Yanling Wei, Ananta Acharya, Qingzhen Jiang, Junmei Kang, E. Charles Brummer
Software Mentions: 3
Published: almost 12 years ago

10.1371/journal.pone.0182235

Natural and artificial feeding management before weaning promote different rumen microbial colonization but not differences in gene expression levels at the rumen epithelium of newborn goats
Cited by: 33
Author(s): Leticia Abecia, Elisabeth Jiménez, Gonzalo Martínez Fernández, A. I. Martín-García, E. Ramos-Morales, Eric Pinloche, Stuart E. Denman, C. J. Newbold, D. R. Yáñez-Ruíz
Software Mentions: 3
Published: almost 9 years ago

10.3389/frai.2019.00028

Challenges and Prospects in Vision and Language Research
Cited by: 34
Author(s): Kushal Kafle, Robik Shrestha, Christopher Kanan
Software Mentions: 3
Published: over 6 years ago