Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/msb.20209760

https://doi.org/10.15252/msb.20209760

HMGB1 coordinates SASP‐related chromatin folding and RNA homeostasis on the path to senescence

Cited by: 27
Author(s): Konstantinos Sofiadis, Nataša Josipović, Miloš Nikolić, Yulia Kargapolova, Nadine Übelmesser, Vassiliki Varamogianni-Mamatsi, Anne Zirkel, Ioanna Papadionysiou, Gary Loughran, James Keane, Audrey M. Michel, Eduardo Gade Gusmao, Christian Becker, Janine Altmüller, Theodore Georgomanolis, Athanasia Mizi, Argyris Papantonis
Published: over 3 years ago

Software Mentions 3

bioconductor: anota2seq
Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq
Papers that mentioned: 8
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203