10.3389/fnmol.2018.00208

Chromatin Remodeling Proteins in Epilepsy: Lessons From CHD2-Associated Epilepsy
Cited by: 34
Author(s): Kay Marie Joan Lamar, Gemma L. Carvill
Software Mentions: 1
Published: about 8 years ago

10.3389/fped.2018.00163

Narrowing the Genetic Causes of Language Dysfunction in the 1q21.1 Microduplication Syndrome
Cited by: 14
Author(s): Antonio Benítez‐Burraco, Montserrat Barcos-Martínez, Isabel Espejo-Portero, Maite Fernández-Urquiza, Raúl Torres-Ruíz, Sandra Rodríguez‐Perales, Ma Salud Jiménez-Romero
Software Mentions: 1
Published: about 8 years ago

10.3389/fpsyt.2020.606372

CNVs and Chromosomal Aneuploidy in Patients With Early-Onset Schizophrenia and Bipolar Disorder: Genotype-Phenotype Associations
Cited by: 4
Author(s): Hojka Gregorič Kumperščak, Danijela Krgović, Maja Drobnič Radobuljac, Nina Senica, Andreja Zagorac, Nadja Kokalj Vokač
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0115385

The Role of Species Traits in Mediating Functional Recovery during Matrix Restoration
Cited by: 19
Author(s): Andrew D. Barnes, Rowan M. Emberson, Frank-Thorsten Krell, Raphaël K. Didham
Software Mentions: 1
Published: over 11 years ago

10.3389/fpsyg.2019.00521

Williams Syndrome, Human Self-Domestication, and Language Evolution
Cited by: 24
Author(s): Amy Niego, Antonio Benítez‐Burraco
Software Mentions: 1
Published: over 7 years ago

10.3390/genes11050525

7q35 Microdeletion and 15q13.3 and Xp22.33 Microduplications in a Patient with Severe Myoclonic Epilepsy, Microcephaly, Dysmorphisms, Severe Psychomotor Delay and Intellectual Disability
Cited by: 3
Author(s): Francesco Paduano, Emma Colao, Sara Loddo, Valeria Orlando, Francesco Trapasso, Antonio Novelli, Nicola Perrotti, Rodolfo Iuliano
Software Mentions: 1
Published: over 6 years ago

10.3390/genes12050652

8p23.2-pter Microdeletions: Seven New Cases Narrowing the Candidate Region and Review of the Literature
Cited by: 8
Author(s): Ilaria Catusi, Maria Garzo, Anna Paola Capra, Silvana Briuglia, Chiara Baldo, Maria Paola Canevini, Rachele Cantone, Flaviana Elia, Francesca Forzano, Ornella Galesi, Enrico Grosso, Michela Malacarne, Angela Peron, Corrado Romano, Monica Saccani, Lidia Larizza, Maria Paola Recalcati
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.2933

Dissecting spatiotemporal patterns of functional diversity through the lens of Darwin's naturalization conundrum
Cited by: 9
Author(s): Sara E. Campbell, Nicholas E. Mandrak
Software Mentions: 1
Published: over 9 years ago

10.3390/genes12071052

A Genomic Approach to Delineating the Occurrence of Scoliosis in Arthrogryposis Multiplex Congenita
Cited by: 3
Author(s): Xénia Latypova, Stefan Giovanni Creadore, Noémi Dahan‐Oliel, Anxhela Gjyshi Gustafson, Steven W. Hwang, Tanya Bedard, Kamran Shazand, Harold J. P. van Bosse, Philip F. Giampietro, Klaus Dieterich
Software Mentions: 1
Published: about 5 years ago

10.1038/s41436-018-0281-4

Homozygosity mapping provides supporting evidence of pathogenicity in recessive Mendelian disease
Cited by: 21
Author(s): Matthew Wakeling, Thomas W Laver, Caroline F. Wright, Elisa De Franco, Karen Stals, Ann‐Marie Patch, Andrew T. Hattersley, Sarah E. Flanagan, Sian Ellard
Software Mentions: 1
Published: over 7 years ago

10.1590/1678-4685-GMB-2016-0049

1p13.2 deletion displays clinical features overlapping Noonan syndrome, likely related to NRAS gene haploinsufficiency
Cited by: 5
Author(s): Natália Duarte Linhares, Maíra Cristina Menezes Freire, Raony Guimarães Corrêa Do Carmo Lisboa Cardenas, Heloísa B. Pena, Katherine Lachlan, Bruno Dallapiccola, Carlos A. Bacino, Bruno Delobel, Paul James, Ann‐Charlotte Thuresson, Göran Annerén, Sérgio D.J. Pena
Software Mentions: 1
Published: about 10 years ago

10.1155/2013/546909

Regression Modeling and Meta-Analysis of Diagnostic Accuracy of SNP-Based Pathogenicity Detection Tools for UGT1A1 Gene Mutation
Cited by: 3
Author(s): Fakher Rahim, Hamid Galehdari, Javad Mohammadi-Asl, Najmaldin Saki
Software Mentions: 1
Published: about 13 years ago

10.1186/s13059-014-0423-1

Deletions of chromosomal regulatory boundaries are associated with congenital disease
Cited by: 122
Author(s): Jonas Ibn-Salem, Sebastian Köhler, Michael I. Love, Ho Ryun Chung, Ni Huang, Matthew E. Hurles, Melissa A. Haendel, Nicole Washington, Damian Smedley, Christopher J. Mungall, Suzanna Lewis, Claus‐Eric Ott, Sebastian Bauer, Paul N. Schofield, Stefan Mundlos, Malte Spielmann, Peter N. Robinson
Software Mentions: 1
Published: almost 12 years ago

10.1186/s13073-015-0199-2

Phenotype-driven strategies for exome prioritization of human Mendelian disease genes
Cited by: 91
Author(s): Damian Smedley, Peter N. Robinson
Software Mentions: 1
Published: about 11 years ago

10.1186/s13073-017-0463-8

Phenotypic and molecular characterisation of CDK13-related congenital heart defects, dysmorphic facial features and intellectual developmental disorders
Cited by: 36
Author(s): Bret L. Bostwick, Scott McLean, Jennifer E. Posey, Haley Streff, Karen W. Gripp, Alyssa Blesson, Nina Powell-Hamilton, Jessica Tusi, David A. Stevenson, Ellyn Farrelly, Louanne Hudgins, Yaping Yang, Fan Xia, Xia Wang, Pengfei Liu, Magdalena Walkiewicz, Marianne McGuire, Dorothy K. Grange, Marisa V. Andrews, Marybeth Hummel, Suneeta Madan‐Khetarpal, Elena Infante, Zeynep Coban‐Akdemir, Karol Miszalski−Jamka, John L. Jefferies, Jill A. Rosenfeld, Lisa Emrick, Kimberly Nugent, James R. Lupski, John W. Belmont, Brendan Lee, Seema R. Lalani
Software Mentions: 1
Published: about 9 years ago

10.1111/tan.14195

<scp> <i>HLA‐E</i> </scp> diversity unfolded: Identification and characterization of 170 novel <scp> <i>HLA‐E</i> </scp> alleles
Cited by: 10
Author(s): Christin Paech, Viviane Albrecht, Kathrin Putke, Gerhard Schöfl, Bianca Schöne, Alexander H. Schmidt, Vinzenz Lange, Anja Klußmeier
Software Mentions: 1
Published: over 5 years ago

10.3390/jcm3020663

Microarray Technology for the Diagnosis of Fetal Chromosomal Aberrations: Which Platform Should We Use?
Cited by: 13
Author(s): Evangelia Karampetsou, Deborah Morrogh, Lyn S. Chitty
Software Mentions: 1
Published: about 12 years ago

10.3390/jcm3031018

Counseling Challenges with Variants of Uncertain Significance and Incidental Findings in Prenatal Genetic Screening and Diagnosis
Cited by: 53
Author(s): Lauren Westerfield, Sandra Darilek, Ignatia B. Van den Veyver
Software Mentions: 1
Published: almost 12 years ago

10.1007/s13238-018-0544-5

Single-cell metagenomics: challenges and applications
Cited by: 61
Author(s): Yuan Xu, Fangqing Zhao
Software Mentions: 1
Published: over 8 years ago

10.1038/s41597-021-00987-8

Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
Cited by: 6
Author(s): Vojtěch Tláskal, Vendula Brabcová, Tomáš Větrovský, Rubén López-Mondéjar, Lummy Maria Oliveira Monteiro, J. Saraiva, Ulisses Nunes da Rocha, Petr Baldrián
Software Mentions: 1
Published: about 5 years ago

10.3389/fneur.2021.678443

Frequency-Domain Optical Coherence Tomography for Intracranial Atherosclerotic Stenosis: Feasibility, Safety, and Preliminary Experience
Cited by: 6
Author(s): Bin Yang, Yiding Feng, Yan Ma, Yabing Wang, Jian Chen, Long Li, Jing Dong, Bairu Zhang, Peng Gao, Yanfei Chen, Adam A. Dmytriw, Liqun Jiao
Software Mentions: 1
Published: about 5 years ago

10.1038/srep19088

RYR2, PTDSS1 and AREG genes are implicated in a Lebanese population-based study of copy number variation in autism
Cited by: 24
Author(s): Jihane Soueid, Silva Kourtian, Nadine J. Makhoul, Joelle Makoukji, Sariah Haddad, Simona S. Ghanem, Firas Kobeissy, Rose‐Mary Boustany
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2105-11-454

On the Choice and Number of Microarrays for Transcriptional Regulatory Network Inference
Cited by: 12
Author(s): Elissa J. Cosgrove, Timothy S. Gardner, Eric D. Kolaczyk
Software Mentions: 1
Published: almost 16 years ago

10.1186/1471-2105-12-463

Lack of sufficiently strong informative features limits the potential of gene expression analysis as predictive tool for many clinical classification problems
Cited by: 11
Author(s): Kenneth R. Hess, Caimiao Wei, Yuan Qi, Takayuki Inomata, W. Fraser Symmans, Lajos Pusztai
Software Mentions: 1
Published: over 14 years ago

10.1186/s12872-019-01320-3

Total iron binding capacity (TIBC) is a potential biomarker of left ventricular remodelling for patients with iron deficiency anaemia
Cited by: 3
Author(s): Yan Chen, Jing Wan, Haidan Xia, LI Ya, Yufeng Xu, Haiyan Lin, Hassah Batool Iftikhar
Software Mentions: 1
Published: over 6 years ago

10.1186/s12863-015-0259-z

Importance of presenting the variability of the false discovery rate control
Cited by: 10
Author(s): Yi‐Ting Lin, Wen‐Chung Lee
Software Mentions: 1
Published: about 11 years ago

10.1186/s12879-017-2246-7

Brain and liver pathology, amyloid deposition, and interferon responses among older HIV-positive patients in the late HAART era
Cited by: 29
Author(s): Isaac H. Solomon, Umberto De Girolami, Sukrutha Chettimada, Vikas Misra, Elyse J. Singer, Dana Gabuzda
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2334-13-203

Plasma metabolomics identifies lipid abnormalities linked to markers of inflammation, microbial translocation, and hepatic function in HIV patients receiving protease inhibitors
Cited by: 105
Author(s): Edana Cassol, Vikas Misra, Alexander G. Holman, Anupa Kamat, Susan Morgello, Dana Gabuzda
Software Mentions: 1
Published: over 13 years ago

10.1186/2050-6511-15-66

Exploiting high-throughput cell line drug screening studies to identify candidate therapeutic agents in head and neck cancer
Cited by: 24
Author(s): Anthony C. Nichols, Morgan Black, John Yoo, Nicole Pinto, Andrew D. Fernandes, Benjamin Haibe‐Kains, Paul C. Boutros, John W. Barrett
Software Mentions: 1
Published: almost 12 years ago

10.3390/metabo9010002

Compositional Differences and Similarities between Typical Chinese Baijiu and Western Liquor as Revealed by Mass Spectrometry-Based Metabolomics
Cited by: 48
Author(s): Cheng Fang, Hai Du, Jia Wang, Yan Xu
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pgen.1001148

Widespread Over-Expression of the X Chromosome in Sterile F1 Hybrid Mice
Cited by: 108
Author(s): Jeffrey M. Good, Thomas Giger, Matthew D. Dean, Michael W. Nachman
Software Mentions: 1
Published: almost 16 years ago

10.1371/journal.pgen.1003715

Global Analysis of Fission Yeast Mating Genes Reveals New Autophagy Factors
Cited by: 86
Author(s): Lingling Sun, Ming Li, Fang Suo, Xiaoman Liu, En-Zhi Shen, Bing Yang, Meng‐Qiu Dong, Weizhong He, Li-Lin Du
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pgen.1004967

Evolutionary Signatures amongst Disease Genes Permit Novel Methods for Gene Prioritization and Construction of Informative Gene-Based Networks
Cited by: 21
Author(s): Nolan Priedigkeit, Nicholas W. Wolfe, Nathan L. Clark
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0019693

A Gene-Phenotype Network for the Laboratory Mouse and Its Implications for Systematic Phenotyping
Cited by: 12
Author(s): Octavio Espinosa, John M. Hancock
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0046091

Early Detection of Malignant Pleural Mesothelioma in Asbestos-Exposed Individuals with a Noninvasive Proteomics-Based Surveillance Tool
Cited by: 126
Author(s): Rachel Ostroff, Michael R. Mehan, A. Keith Stewart, Deborah Ayers, Edward N. Brody, Stephen Williams, S. M. Levin, Brad Black, Michael Harbut, Michele Carbone, Chandra Goparaju, Harvey I. Pass
Software Mentions: 1
Published: almost 14 years ago

10.1093/bioinformatics/btt750

Subclonal variant calling with multiple samples and prior knowledge
Cited by: 119
Author(s): Moritz Gerstung, Elli Papaemmanuil, Peter J. Campbell
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0121394

Neutral and Adaptive Drivers of Microgeographic Genetic Divergence within Continuous Populations: The Case of the Neotropical Tree Eperua falcata (Aubl.)
Cited by: 19
Author(s): Louise Brousseau, Matthieu Foll, Caroline Scotti‐Saintagne, Ivan Scotti
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0119145

Deconvoluting the Composition of Low-Frequency Hepatitis C Viral Quasispecies: Comparison of Genotypes and NS3 Resistance-Associated Variants between HCV/HIV Coinfected Hemophiliacs and HCV Monoinfected Patients in Japan
Cited by: 12
Author(s): Masato Ogishi, Hiroshi Yotsuyanagi, Takeshi Tsutsumi, Hiroyuki Gatanaga, Hirotaka Ode, Wataru Sugiura, Kyoji Moriya, Shinichi Oka, Satoshi Kimura, Kazuhiko Koike
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0186175

Comprehensive benchmarking of SNV callers for highly admixed tumor data
Cited by: 12
Author(s): Regina Bohnert, Sonia Vivas, Gunther Jansen
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41436-018-0274-3

Frequency and signature of somatic variants in 1461 human brain exomes
Cited by: 18
Author(s): Wei Wei, Michael J. Keogh, Juvid Aryaman, Zoe J. Golder, Peter Kullar, I. J. Wilson, Kevin Talbot, Martin R Turner, Chris-Anne McKenzie, Claire Troakes, Johannes Attems, Colin Smith, Safa Al Sarraj, Christopher M. Morris, Olaf Ansorge, Nick Jones, James W. Ironside, Patrick F. Chinnery
Software Mentions: 1
Published: over 7 years ago

10.1186/s13059-019-1659-6

Analysis of error profiles in deep next-generation sequencing data
Cited by: 179
Author(s): Xiaotu Ma, Ying Shao, Liqing Tian, Diane A. Flasch, Heather L. Mulder, Michael N. Edmonson, Yu Liu, Xiang Chen, Scott Newman, Joy Nakitandwe, Yongjin Li, Benshang Li, Shuhong Shen, Zhaoming Wang, Sheila Shurtleff, Leslie L. Robison, Shawn Levy, John Easton, Jinghui Zhang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.ppat.1008009

A robust human norovirus replication model in zebrafish larvae
Cited by: 99
Author(s): Jana Van Dycke, Annelii Ny, Nádia Conceição-Neto, Jan Maes, Myra Hosmillo, Arno Cuvry, Ian Goodfellow, Tatiane C Nogueira, Erik Verbeken, Jelle Matthijnssens, Peter de Witte, Johan Neyts, Joana Rocha‐Pereira
Software Mentions: 1
Published: almost 7 years ago

10.1128/mBio.00042-17

Lethal Consequences of Overcoming Metabolic Restrictions Imposed on a Cooperative Bacterial Population
Cited by: 12
Author(s): Eunhye Goo, Yong-Cheol Kang, Jae Yun Lim, Hyeonheui Ham, Ingyu Hwang
Software Mentions: 1
Published: over 9 years ago

10.1534/g3.114.012096

Insight Into Genomic Changes Accompanying Divergence: Genetic Linkage Maps and Synteny of<i>Lucania goodei</i>and<i>L. parva</i>Reveal a Robertsonian Fusion
Cited by: 10
Author(s): Emma L. Berdan, Genevieve M. Kozak, Ray Ming, A. Lane Rayburn, Ryan Kiehart, Rebecca C. Fuller
Software Mentions: 1
Published: about 12 years ago

10.1038/srep44445

Reduced DNA methylation and psychopathology following endogenous hypercortisolism – a genome-wide study
Cited by: 27
Author(s): Camilla A M Glad, Johanna C. Andersson‐Assarsson, Peter Berglund, Ragnhildur Bergthorsdottir, Oskar Ragnarsson, Gudmundur Johannsson
Software Mentions: 1
Published: over 9 years ago

10.18632/oncotarget.25436

High-throughput testing in head and neck squamous cell carcinoma identifies agents with preferential activity in human papillomavirus-positive or negative cell lines
Cited by: 13
Author(s): Farhad Ghasemi, Morgan Black, Ren Sun, Frederick S. Vizeacoumar, Nicole Pinto, Kara M. Ruicci, John Yoo, Kevin Fung, Danielle MacNeil, David A. Palma, Eric Winquist, Joe S. Mymryk, Laurie Ailles, Alessandro Datti, John W. Barrett, Paul C. Boutros, Anthony C. Nichols
Software Mentions: 1
Published: over 8 years ago

10.3390/nu10121860

The Effect of a High-Dose Vitamin B Multivitamin Supplement on the Relationship between Brain Metabolism and Blood Biomarkers of Oxidative Stress: A Randomized Control Trial
Cited by: 50
Author(s): Talitha C. Ford, Luke A. Downey, Tamara Simpson, Grace McPhee, Chris Oliver, Con Stough
Software Mentions: 1
Published: over 7 years ago

10.1155/2014/276589

A Machine Learning Approach for Specification of Spinal Cord Injuries Using Fractional Anisotropy Values Obtained from Diffusion Tensor Images
Cited by: 26
Author(s): Bunheang Tay, Jung Keun Hyun, Sejong Oh
Software Mentions: 1
Published: over 12 years ago

10.1186/1472-6750-14-58

Identification of rapidly induced genes in the response of peanut (Arachis hypogaea) to water deficit and abscisic acid
Cited by: 37
Author(s): Xiaoyun Li, Jiafeng Lü, Shuai Liu, Xu Liu, Yingying Lin, Ling Li
Software Mentions: 1
Published: about 12 years ago

10.1186/s12896-016-0325-2

Transcriptomic response of wolf spider, Pardosa pseudoannulata, to transgenic rice expressing Bacillus thuringiensis Cry1Ab protein
Cited by: 9
Author(s): Juan Wang, Yu Peng, Kaifu Xiao, Baoyang Wei, Jianwen Hu, Zhi Wang, Qisheng Song, Xuguo Zhou
Software Mentions: 1
Published: over 9 years ago

10.1186/s12896-021-00716-4

Bacteriostatic effects of benzyl isothiocyanate on Vibrio parahaemolyticus: Transcriptomic analysis and morphological verification
Cited by: 4
Author(s): Jianan Liu, Ke Zhang, Jie Song, Hongyan Wu, Hongshun Hao, Jingran Bi, Hongman Hou, Gongliang Zhang
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2020.589304

Computational Derivation of Core, Dynamic Human Blunt Trauma Inflammatory Endotypes
Cited by: 10
Author(s): Lukas Schimunek, Haley Lindberg, Maria Cohen, Rami A. Namas, Qi Mi, Jinling Yin, Derek Barclay, Fayten El-Dehaibi, Andrew Abboud, Rubén Zamora, Timothy R. Billiar, Yoram Vodovotz
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-16397-z

Different protein-protein interface patterns predicted by different machine learning methods
Cited by: 18
Author(s): Wei Wang, Yongxiao Yang, Jianxin Yin, Xinqi Gong
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12861-020-00213-5

The functions of ocu-miR-205 in regulating hair follicle development in Rex rabbits
Cited by: 13
Author(s): Gongyan Liu, Shu Li, Hongli Liu, Yanli Zhu, Liya Bai, Haitao Sun, Shuxia Gao, Wenxue Jiang, Fuchang Li
Software Mentions: 1
Published: over 6 years ago

10.1186/s12863-015-0276-y

MicroRNA profiles reveal female allotetraploid hybrid fertility
Cited by: 8
Author(s): Rong Zhou, Yanhong Wu, Min Tao, Chun Zhang, Shaojun Liu
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12863-016-0389-y

Integrative analysis of transcriptomics and proteomics of skeletal muscles of the Chinese indigenous Shaziling pig compared with the Yorkshire breed
Cited by: 47
Author(s): Huanming Yang, Xing-Li Xu, Haiming Ma, Jun Jiang
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0130430

The Impact of Climate on the Spread of Rice to North-Eastern China: A New Look at the Data from Shandong Province
Cited by: 32
Author(s): Jade d’Alpoim Guedes, Jin Gao, R. Kyle Bocinsky
Software Mentions: 1
Published: about 11 years ago

10.1186/s12864-020-06876-5

Adaptation of pine wood nematode Bursaphelenchus xylophilus to β-pinene stress
Cited by: 7
Author(s): Yongxia Li, Yuqian Feng, Xuan Wang, Jing Cui, Xun Deng, Xingyao Zhang
Software Mentions: 1
Published: about 6 years ago

10.1186/s12864-021-07759-z

Two homologous Salmonella serogroup C1-specific genes are required for flagellar motility and cell invasion
Cited by: 2
Author(s): Xiujuan Zhou, Bin Liu, Yanhong Liu, Chunlei Shi, Pina M. Fratamico, Lida Zhang, Dapeng Wang, Jianhua Zhang, Yan Cui, Ping Xu, Xianming Shi
Software Mentions: 1
Published: about 5 years ago

10.1186/s42492-019-0034-5

Facial expression recognition using three-stage support vector machines
Cited by: 14
Author(s): Issam Dagher, Elio Dahdah, Morshed Al Shakik
Software Mentions: 1
Published: over 6 years ago

10.3389/fneur.2020.577362

Neurophthalmologic and Orthoptic Ambulatory Assessments Reveal Ocular and Visual Changes in Patients With Early Alzheimer and Parkinson's Disease
Cited by: 4
Author(s): Alessia Bargagli, Enrica Fontanelli, Dario Zanca, Ilaria Castelli, Francesca Rosini, Silvia Maddii, Ilaria Di Donato, Alessandra Carluccio, Carla Battisti, Gian Marco Tosi, Maria Teresa Dotti, Alessandra Rufa
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12864-016-3017-3

Transcriptome analysis of smooth cordgrass (Spartina alterniflora Loisel), a monocot halophyte, reveals candidate genes involved in its adaptation to salinity
Cited by: 34
Author(s): Renesh Bedre, Venkata Mangu, Subodh Srivastava, Luis E. Sanchez, Niranjan Baisakh
Software Mentions: 1
Published: about 10 years ago

10.1186/s12864-016-3253-6

Transcriptome analysis reveals dynamic changes in coxsackievirus A16 infected HEK 293T cells
Cited by: 23
Author(s): Jun Jin, Rujiao Li, Chunlai Jiang, Ruosi Zhang, Xiaomeng Ge, Liang Fang, Xin Sheng, Wenwen Dai, Meili Chen, Jiayan Wu, Jingfa Xiao, Weiheng Su
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-020-6509-0

Dynamic transcriptome profiling exploring cold tolerance in forensically important blow fly, Aldrichina grahami (Diptera: Calliphoridae)
Cited by: 6
Author(s): Zhuoying Liu, Han Han, Fanming Meng, Yangshuai Jiang, Jifeng Cai
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-018-5199-3

Transcriptome profiling of two contrasting ornamental cabbage (Brassica oleracea var. acephala) lines provides insights into purple and white inner leaf pigmentation
Cited by: 25
Author(s): Si-Won Jin, Abdur Rahim, Khandker Shazia Afrin, Jong-In Park, Jong-Goo Kang, Ill–Sup Nou
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12864-020-6533-0

Identification of transcriptome and fluralaner responsive genes in the common cutworm Spodoptera litura Fabricius, based on RNA-seq
Cited by: 17
Author(s): Zhong‐Qiang Jia, Di Liu, Yajun Peng, Zhaojun Han, Chunqing Zhao, Tao Tang
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-15-571

RNA-Seq for gene identification and transcript profiling of three Stevia rebaudiana genotypes
Cited by: 54
Author(s): Junwen Chen, Kai Hou, Peng Qin, Hongchang Liu, Bin Yi, Wenting Yang, Wei Wu
Software Mentions: 1
Published: about 12 years ago

10.1186/s12864-015-1873-x

De novo transcriptome sequencing and comprehensive analysis of the drought-responsive genes in the desert plant Cynanchum komarovii
Cited by: 35
Author(s): Xueqing Ma, Ping Wang, Sihong Zhou, Yipeng Sun, Nana Liu, Xiaoning Li, Yuxia Hou
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12864-019-6111-5

Small RNA and degradome deep sequencing reveal respective roles of cold-related microRNAs across Chinese wild grapevine and cultivated grapevine
Cited by: 13
Author(s): Pengfei Wang, Yang Yang, Hongmei Shi, Yongmei Wang, Fengshan Ren
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12864-020-6698-6

Transcriptomic analysis of sea cucumber (Holothuria leucospilota) coelomocytes revealed the echinoderm cytokine response during immune challenge
Cited by: 9
Author(s): Xiaofen Wu, Ting Chen, Da Huo, Zonghe Yu, Yao Ruan, Chuhang Cheng, Xiao Jiang, Chen Ren
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-019-6022-5

Candidates for chemosensory genes identified in the Chinese citrus fly, Bactrocera minax, through a transcriptomic analysis
Cited by: 17
Author(s): Zhongzhen Wu, CongBao Kang, Meng-Qiu Qu, Junlong Chen, Ming‐Shun Chen, Shuying Bin, Jintian Lin
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-016-2532-6

RNA sequencing to characterize transcriptional changes of sexual maturation and mating in the female oriental fruit fly Bactrocera dorsalis
Cited by: 20
Author(s): Weiwei Zheng, Deye Luo, Fensheng Wu, Jialu Wang, Hongyu Zhang
Software Mentions: 1
Published: over 10 years ago

10.1155/2013/532936

Interactive Multigrid Refinement for Deformable Image Registration
Cited by: 1
Author(s): Wu Zhou, Yaoqin Xie
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0144184

Free Form Deformation–Based Image Registration Improves Accuracy of Traction Force Microscopy
Cited by: 22
Author(s): Álvaro Jorge-Peñas, Alicia Izquierdo-Álvarez, Rocío Aguilar-Cuenca, Miguel Vicente‐Manzanares, José Manuel García Aznar, Hans Van Oosterwyck, Elena M. De‐Juan‐Pardo, Carlos Ortíz-de-Solórzano, Arrate Muñoz-Barrutia
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0110594

Comparison of Total Variation with a Motion Estimation Based Compressed Sensing Approach for Self-Gated Cardiac Cine MRI in Small Animal Studies
Cited by: 17
Author(s): Juan F P J Abascal, Paula Montesinos, Eugenio Marinetto, Javier Pascau, Manuel Desco
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12864-020-6492-5

Integrated mRNA and miRNA transcriptome analysis reveals a regulatory network for tuber expansion in Chinese yam (Dioscorea opposita)
Cited by: 19
Author(s): Yunyi Zhou, Jie Zhan, Saba Hameed, Dong Xiao, Jiasui Zhan, Aiqing Wang, Long-Fei He
Software Mentions: 1
Published: over 6 years ago

10.3389/frobt.2021.616470

Approaches for Efficiently Detecting Frontier Cells in Robotics Exploration
Cited by: 7
Author(s): Phillip Quin, Dac Dang Khoa Nguyen, Thanh Long Vu, Alen Alempijevic, Gavin Paul
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-021-07403-w

Transcriptome sequencing and metabolome analysis of food habits domestication from live prey fish to artificial diets in mandarin fish (Siniperca chuatsi)
Cited by: 16
Author(s): Shan He, Jun-Jie You, Xu‐Fang Liang, Zhi-Lu Zhang, Yanpeng Zhang
Software Mentions: 1
Published: over 5 years ago

10.1120/jacmp.v11i3.3175

Assessment of a commercially available automatic deformable registration system
Cited by: 27
Author(s): B. G. Fallone, D. Ryan C. Rivest, Terence Riauka, Albert Murtha
Software Mentions: 1
Published: about 16 years ago

10.1186/s12864-020-06802-9

Genome-wide analysis of proline-rich extension-like receptor protein kinase (PERK) in Brassica rapa and its association with the pollen development
Cited by: 14
Author(s): Guohu Chen, Jian Wang, Hao Wang, Chenggang Wang, Xiaoyan Tang, Jie Li, Lei Zhang, Jinhui Song, Jinfeng Hou, Lingyun Yuan
Software Mentions: 1
Published: about 6 years ago

10.1007/s10822-013-9684-0

Computational analysis of local membrane properties
Cited by: 136
Author(s): Vytautas Gapsys, Bert L. de Groot, Rodolfo Briones
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12864-019-6094-2

MicroRNAs and their regulatory networks in Chinese Gushi chicken abdominal adipose tissue during postnatal late development
Cited by: 21
Author(s): Yi Chen, Yaping Zhao, Wenjiao Jin, Yuanfang Li, Yanhua Zhang, Xuejie Ma, Guirong Sun, Ruili Han, Yadong Tian, Hong Li, Xiangtao Kang, Guoxi Li
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-2164-14-377

Insight into the specific virulence related genes and toxin-antitoxin virulent pathogenicity islands in swine streptococcosis pathogen Streptococcus equi ssp. zooepidemicus strain ATCC35246
Cited by: 24
Author(s): Zhe Ma, Jianing Geng, Yang Li, Bin Xu, Ruoyu Jia, Yue Li, Qingshu Meng, Hongjie Fan, Songnian Hu
Software Mentions: 1
Published: about 13 years ago

10.1186/s12864-016-3127-y

De novo assembly and transcriptome characterization of spruce dwarf mistletoe Arceuthobium sichuanense uncovers gene expression profiling associated with plant development
Cited by: 21
Author(s): Yonglin Wang, Xuewu Li, Weifen Zhou, Tao Li, Chengming Tian
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12864-015-1658-2

Genome-wide transcriptomic analysis of a superior biomass-degrading strain of A. fumigatus revealed active lignocellulose-degrading genes
Cited by: 35
Author(s): Youzhi Miao, Dongyang Liu, Guangqi Li, Li Pan, Yangchun Xu, Qirong Shen, Ruifu Zhang
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2164-12-186

A systematic analysis of the skeletal muscle miRNA transcriptome of chicken varieties with divergent skeletal muscle growth identifies novel miRNAs and differentially expressed miRNAs
Cited by: 86
Author(s): Tingting Li, Rimao Wu, Yong Zhang, Dahai Zhu
Software Mentions: 1
Published: over 15 years ago

10.1186/s12864-018-4565-5

Molecular mechanisms of an antimicrobial peptide piscidin (Lc-pis) in a parasitic protozoan, Cryptocaryon irritans
Cited by: 8
Author(s): Ruan-Ni Chen, Yong Mao, Jun Wang, Min Liu, Ying Qiao, Libing Zheng, Yongquan Su, Qiaozhen Ke, Weiqiang Zheng
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-018-4706-x

Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress
Cited by: 50
Author(s): Ke Wang, Zhenyu Bai, Qianyu Liang, Qinglin Liu, Lei Zhang, Yuanzhi Pan, Guangli Liu, Beibei Jiang, Fan Zhang, Jing Yin
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-15-14

Differential transcriptional profile of Corynebacterium pseudotuberculosis in response to abiotic stresses
Cited by: 40
Author(s): Anne Cybelle Pinto, Pablo Henrique Caracciolo Gomes de Sá, Rommel Thiago Jucá Ramos, Silvanira Barbosa, Hivana Patricia Melo Barbosa, Adriana Carneiro Ribeiro, Wanderson Marques Silva, Flávia Souza Rocha, Mariana Passos Santana, Thiago Luiz de Paula Castro, Anderson Miyoshi, Maria Paula Cruz Schneider, Artur M. S. Silva, Vasco Azevedo
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2296-14-64

Identifying frailty: do the Frailty Index and Groningen Frailty Indicator cover different clinical perspectives? a cross-sectional study
Cited by: 67
Author(s): Irene Drubbel, Nienke Bleijenberg, Guido Kranenburg, René Eijkemans, Marieke J. Schuurmans, Niek J. de Wit, Mattijs E. Numans
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2318-10-57

A Frailty Instrument for primary care: findings from the Survey of Health, Ageing and Retirement in Europe (SHARE)
Cited by: 368
Author(s): Román Romero-Ortuño, Cathal Walsh, Brian A. Lawlor, Rose Anne Kenny
Software Mentions: 1
Published: about 16 years ago

10.1186/s12877-019-1242-8

Prognostic value of frailty in elderly patients with acute coronary syndrome: a systematic review and meta-analysis
Cited by: 38
Author(s): Qingyu Dou, Wen Wang, Hui Wang, Yao Ma, Shan Hai, Xiufang Lin, Ying Liu, Xinjun Zhang, Jiarui Wu, Birong Dong
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-020-06976-2

Comparative analysis of diet-associated responses in two rice planthopper species
Cited by: 6
Author(s): Hai‐Jian Huang, Jia‐Rong Cui, Xiao‐Yue Hong
Software Mentions: 1
Published: about 6 years ago

10.1186/s12889-019-7860-4

Identification of food insecurity factors in French-speaking Belgium: a qualitative study
Cited by: 2
Author(s): Vincent Huberland, Pascal Semaille, Nadine Kacenelenbogen
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-015-2357-8

De novo comparative transcriptome analysis provides new insights into sucrose induced somatic embryogenesis in camphor tree (Cinnamomum camphora L.)
Cited by: 36
Author(s): Xueping Shi, Cuijie Zhang, Qinhong Liu, Zhe Zhang, Bo Zheng, Manzhu Bao
Software Mentions: 1
Published: over 10 years ago

10.3390/brainsci7110150

Digital Platforms in the Assessment and Monitoring of Patients with Bipolar Disorder
Cited by: 40
Author(s): Arvind Rajagopalan, Pranav R. Shah, Melvyn W. Zhang, Roger Ho
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12864-017-4055-1

Physiological and de novo transcriptome analysis of the fermentation mechanism of Cerasus sachalinensis roots in response to short-term waterlogging
Cited by: 44
Author(s): Peng Zhang, Deguo Lyu, Luting Jia, Jun He, Sijun Qin
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0159255

Co-Expression of Cancer Stem Cell Markers Corresponds to a Pro-Tumorigenic Expression Profile in Pancreatic Adenocarcinoma
Cited by: 32
Author(s): J. Škoda, Markéta Hermanová, Tomáš Loja, Pavel Němec, Jakub Neradil, Petr Karásek, Renata Veselská
Software Mentions: 1
Published: about 10 years ago

10.12688/f1000research.4431.2

ReactomeFIViz: a Cytoscape app for pathway and network-based data analysis
Cited by: 135
Author(s): Guanming Wu, Eric T. Dawson, Adrian Duong, Robin Haw, Lincoln Stein
Software Mentions: 1
Published: almost 12 years ago

10.3389/fimmu.2020.00198

Impaired Airway Epithelial Barrier Integrity in Response to Stenotrophomonas maltophilia Proteases, Novel Insights Using Cystic Fibrosis Bronchial Epithelial Cell Secretomics
Cited by: 6
Author(s): Kevin Molloy, Gerard Cagney, Eugene Dillon, Kieran Wynne, Catherine M. Greene, Noel G. McElvaney
Software Mentions: 1
Published: over 6 years ago