10.3390/ijms21249478

Toll-Like Receptor 7 Is Required for Lacrimal Gland Autoimmunity and Type 1 Diabetes Development in Male Nonobese Diabetic Mice
Cited by: 8
Author(s): Ivy L. Debreceni, Michael S. Chimenti, David Serreze, Aron M. Geurts, Yi-Guang Chen, Scott M. Lieberman
Software Mentions: 4
Published: over 5 years ago

10.3390/ijms21144865

Cytological and Gene Profile Expression Analysis Reveals Modification in Metabolic Pathways and Catalytic Activities Induce Resistance in Botrytis cinerea Against Iprodione Isolated From Tomato
Cited by: 4
Author(s): Ambreen Maqsood, Chaorong Wu, Sunny Ahmar, Haiyan Wu
Software Mentions: 4
Published: about 6 years ago

10.1186/s12985-019-1211-z

The altered gut virome community in rhesus monkeys is correlated with the gut bacterial microbiome and associated metabolites
Cited by: 9
Author(s): Heng Li, Hongzhe Li, Jingjing Wang, Lei Guo, Haitao Fan, Huiwen Zheng, Zening Yang, Xing Huang, Manman Chu, Fengmei Yang, Zhanlong He, Nan Li, Jun Yang, Qiongwen Wu, Hongzhe Shi, Longding Liu
Software Mentions: 4
Published: almost 7 years ago

10.14202/vetworld.2020.1245-1250

Effect of soybean expeller supplementation during the final phase of sow gestation on litter birth weight
Cited by: 0
Author(s): Santiago Masi Mignaco, Ana Alba-Casals, Alicia Carranza, Julián Parada
Software Mentions: 4
Published: over 6 years ago

10.3390/ijms21176067

Long-Term Impact of Chemical and Alternative Fungicides Applied to Grapevine cv Nebbiolo on Berry Transcriptome
Cited by: 7
Author(s): Raffaella Balestrini, Stefano Ghignone, Gabriela Quiroga, Valentina Fiorilli, Irene Romano, Giorgio Gambino
Software Mentions: 4
Published: almost 6 years ago

10.1186/s10020-021-00294-3

Identification of prognostic alternative splicing events related to the immune microenvironment of hepatocellular carcinoma
Cited by: 6
Author(s): Shanshan Yu, Luya Cai, Chuan Liu, Ruihong Gu, Lingyi Cai, Leying Zhuo
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.64283

Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs
Cited by: 19
Author(s): Swati Gaikwad, Fardin Ghobakhlou, David J. Young, Jyothsna Visweswaraiah, Hongen Zhang, Alan G. Hinnebusch
Software Mentions: 4
Published: over 5 years ago

10.1038/srep44171

SEDA: A software package for the Statistical Earthquake Data Analysis
Cited by: 16
Author(s): Anna Maria Lombardi
Software Mentions: 4
Published: over 9 years ago

10.3389/fmicb.2018.00297

Linking Associations of Rare Low-Abundance Species to Their Environments by Association Networks
Cited by: 10
Author(s): Tatiana V. Karpinets, Vancheswaran Gopalakrishnan, Jennifer A. Wargo, Andrew Futreal, Christopher W. Schadt, Jianhua Zhang
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0146916

Parallel Mapping of Antibiotic Resistance Alleles in Escherichia coli
Cited by: 15
Author(s): Sophie Weiss, Thomas J. Mansell, Pooneh Mortazavi, Rob Knight, Ryan T. Gill
Software Mentions: 4
Published: over 10 years ago

10.7554/eLife.65856

CRISPR-based functional genomics in human dendritic cells
Cited by: 10
Author(s): Marco Jost, Amy N. Jacobson, Jeffrey A. Hussmann, Giana Cirolia, Michael A. Fischbach, Jonathan S. Weissman
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0209055

Extent of the annual Gulf of Mexico hypoxic zone influences microbial community structure
Cited by: 14
Author(s): Lauren Gillies Campbell, J. Cameron Thrash, Nancy N. Rabalais, Olivia U. Mason
Software Mentions: 4
Published: about 7 years ago

10.1371/journal.pone.0180561

Three distinct pneumotypes characterize the microbiome of the lung in BALB/cJ mice
Cited by: 7
Author(s): Julia Scheiermann, Dennis M. Klinman
Software Mentions: 4
Published: about 9 years ago

10.1371/journal.pone.0149171

RNA-Seq Reveals the Angiogenesis Diversity between the Fetal and Adults Bone Mesenchyme Stem Cell
Cited by: 2
Author(s): Xin Zhao, Yingmin Han, Yu Liang, Chao Nie, Jian Wang
Software Mentions: 4
Published: over 10 years ago

10.3389/fimmu.2021.716075

Transcriptome Analysis of Peripheral Blood Mononuclear Cells Reveals Distinct Immune Response in Asymptomatic and Re-Detectable Positive COVID-19 Patients
Cited by: 10
Author(s): Jiaqi Zhang, Dan Lin, Kui Li, Xiangming Ding, Lin Li, Yuntao Liu, Dongdong Liu, Jing Lin, Xiangyun Teng, Yizhe Li, Ming Liu, Jian Shen, Xiaodan Wang, He Dan, Yawei Shi, Dawei Wang, Jianhua Xu
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41388-018-0273-5

KMT2C mediates the estrogen dependence of breast cancer through regulation of ERα enhancer function
Cited by: 91
Author(s): Kinisha Gala, Qing Li, Amit Sinha, Pedram Razavi, M. Dorso, Francisco Sanchez‐Vega, Young Rock Chung, Ronald C. Hendrickson, James J. Hsieh, Michael F. Berger, Nikolaus Schultz, Alessandro Pastore, Omar Abdel‐Wahab, Sarat Chandarlapaty
Software Mentions: 4
Published: about 8 years ago

10.3389/fphar.2021.625543

The Synergistic Effects of 5-Aminosalicylic Acid and Vorinostat in the Treatment of Ulcerative Colitis
Cited by: 10
Author(s): Lina He, Shuting Wen, Zhuotai Zhong, Senhui Weng, Qilong Jiang, Hong Mi, Fengbin Liu
Software Mentions: 4
Published: about 5 years ago

10.1186/s12944-019-1142-0

LncRNA SNHG8 is identified as a key regulator of acute myocardial infarction by RNA-seq analysis
Cited by: 26
Author(s): Liuan Zhuo, Yi-Tao Wen, Yong Wang, Zhi-Fang Liang, Gang Wu, Nong Mei-dan, Miao Liu
Software Mentions: 4
Published: over 6 years ago

10.1136/jitc-2020-001610

Neoadjuvant chemoradiation alters biomarkers of anticancer immunotherapy responses in locally advanced rectal cancer
Cited by: 17
Author(s): Incheol Seo, Hye Won Lee, Sang Jun Byun, Jee Young Park, Hyeonji Min, Sung Hwan Lee, Ju-Seog Lee, Shin Kim, Sung Uk Bae
Software Mentions: 4
Published: over 5 years ago

10.1186/s12890-018-0675-8

Latent class analysis to define radiological subgroups in pulmonary nontuberculous mycobacterial disease
Cited by: 12
Author(s): Steven Cowman, Joseph Jacob, S. Obaidee, Andres Floto, Robert Wilson, Charles Haworth, Michael R. Loebinger
Software Mentions: 4
Published: almost 8 years ago

10.3389/fgene.2018.00228

Network Rewiring in Cancer: Applications to Melanoma Cell Lines and the Cancer Genome Atlas Patients
Cited by: 6
Author(s): Kuan Fu Ding, Darren Finlay, Hongwei Yin, William P.D. Hendricks, Chris Sereduk, Jeffrey Kiefer, Aleksandar Sekulić, Patricia LoRusso, Kristiina Vuori, Jeffrey M. Trent, Nicholas J. Schork
Software Mentions: 4
Published: about 8 years ago

10.1155/2020/8347639

A Five-Genes-Based Prognostic Signature for Cervical Cancer Overall Survival Prediction
Cited by: 21
Author(s): Menghuang Zhao, Wenbin Huang, Shuangwei Zou, Qi Shen, Xueqiong Zhu
Software Mentions: 4
Published: over 6 years ago

10.3389/fphys.2020.01019

Genome-Wide Network of lncRNA–mRNA During Ovine Oocyte Development From Germinal Vesicle to Metaphase II in vitro
Cited by: 15
Author(s): Jun-Jie Wang, Menghan Niu, Teng Zhang, Wei Shen, Cao H
Software Mentions: 4
Published: almost 6 years ago

10.3389/fpls.2021.643137

Nepenthes × ventrata Transcriptome Profiling Reveals a Similarity Between the Evolutionary Origins of Carnivorous Traps and Floral Organs
Cited by: 4
Author(s): А. В. Щенникова, Alexey V. Beletsky, M. A. Filyushin, М. А. Слугина, Eugeny V. Gruzdev, Andrey V. Mardanov, Е. З. Кочиева, Н. В. Равин
Software Mentions: 4
Published: about 5 years ago

10.1186/s12936-021-03848-2

MALBoost: a web-based application for gene regulatory network analysis in Plasmodium falciparum
Cited by: 0
Author(s): Roelof van Wyk, Riëtte van Biljon, Lyn-Marié Birkholtz
Software Mentions: 4
Published: about 5 years ago

10.3390/life8040063

Impact of Rearing Conditions on the Ambrosia Beetle’s Microbiome
Cited by: 17
Author(s): Luis A. Ibarra-Juárez, Damaris Desgarennes, Mirna Vázquez-Rosas-Landa, Emanuel Villafán, Alexandro Alonso-Sánchez, Ofelia Ferrera-Rodríguez, Andrés Moya, Daniel Carrillo, Luisa F. Cruz, Gloria Carrión, Abel López-Buenfil, Clemente de Jesús García-Ávila, Enrique Ibarra-Laclette, Araceli Lamelas
Software Mentions: 4
Published: over 7 years ago

10.3390/ani10040676

Transport to the Slaughterhouse Affects the Salmonella Shedding and Modifies the Fecal Microbiota of Finishing Pigs
Cited by: 11
Author(s): Francesca Romana Massacci, Alessandra Morelli, Lucilla Cucco, Adrien Castinel, Roberta Ortenzi, Silvia Tofani, Giovanni Pezzotti, Jordi Estellé, Marta Paniccià, Chiara Francesca Magistrali
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0231238

Metabolic versatility of freshwater sedimentary archaea feeding on different organic carbon sources
Cited by: 5
Author(s): Sergi Compte-Port, Mireia Fillol, Frédéric Gich, Carles M. Borrego
Software Mentions: 4
Published: over 6 years ago

10.3390/life11050367

Activation of Blood Vessel Development in Endometrial Stromal Cells In Vitro Cocultured with Human Peri-Implantation Embryos Revealed by Single-Cell RNA-Seq
Cited by: 4
Author(s): Bo Lv, Xiaoyu Xu, Xunyi Zhang, Lingbin Qi, He We, Lu Wang, Xian Chen, Luying Peng, Jinfeng Xue, Yao Ji, Zhigang Xue
Software Mentions: 4
Published: over 5 years ago

10.3390/genes10090719

WGCNA Analysis of Salt-Responsive Core Transcriptome Identifies Novel Hub Genes in Rice
Cited by: 50
Author(s): Mei-Ling Zhu, Hongjun Xie, Xiangjin Wei, Komivi Dossa, Yaying Yu, Suozhen Hui, Guohua Tang, Xiaoshan Zeng, Ye Yu, Jianlong Wang
Software Mentions: 4
Published: almost 7 years ago

10.3390/life11060578

Comparative Analysis of Flavonoid Metabolites in Foxtail Millet (Setaria italica) with Different Eating Quality
Cited by: 8
Author(s): Yakun Zhang, Jianhua Gao, Qianru Qie, Yulu Yang, Siyu Hou, Xingchun Wang, Xukai Li, Yuanhuai Han
Software Mentions: 4
Published: about 5 years ago

10.1002/advs.201903366

Transferrin Receptor 1 Regulates Thermogenic Capacity and Cell Fate in Brown/Beige Adipocytes
Cited by: 33
Author(s): Jin Li, Xiaohan Pan, Guihua Pan, Zijun Song, Yao He, Susu Zhang, Xueru Ye, Yang Xiang, Enjun Xie, Xinhui Wang, Xudong Mai, Xing Yin, Biyao Tang, Xuan Shu, Pengyu Chen, Xiaoshuang Dai, Ye Tian, Liheng Yao, Mulan Han, Guohuan Xu, Huijie Zhang, Jia Sun, Hong Chen, Fudi Wang, Junxia Min, Liwei Xie
Software Mentions: 4
Published: about 6 years ago

10.18632/aging.102034

A large-scale CRISPR screen and identification of essential genes in cellular senescence bypass
Cited by: 5
Author(s): Xuehui Li, Lei Wei, Qiongye Dong, Liyang Liu, Michael Q. Zhang, Zhen Xie, Xiaowo Wang
Software Mentions: 4
Published: about 7 years ago

10.7717/peerj.7552

Oceanographic habitat and the coral microbiomes of urban-impacted reefs
Cited by: 4
Author(s): Stephanie M. Rosales, Christopher D. Sinigalliano, Maribeth L. Gidley, Paul R. Jones, Lewis J. Gramer
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41416-019-0468-8

Risk of cardiovascular events in men treated for prostate cancer compared with prostate cancer-free men
Cited by: 8
Author(s): Ida Rask Moustsen-Helms, Signe Benzon Larsen, Anne Katrine Duun‐Henriksen, Anne Tjønneland, Susanne K. Kjær, Klaus Brasso, Christoffer Johansen, Susanne Oksbjerg Dalton
Software Mentions: 4
Published: about 7 years ago

10.1084/jem.20200137

PDGFA-associated protein 1 protects mature B lymphocytes from stress-induced cell death and promotes antibody gene diversification
Cited by: 6
Author(s): Verónica Delgado-Benito, Maria Berruezo-Llacuna, Robert Altwasser, Wiebke Winkler, Devakumar Sundaravinayagam, Sandhya Balasubramanian, Marieta Caganova, Robin Graf, Ali Rahjouei, Marie-Thérèse Henke, Madlen Driesner, Lisa Keller, Alessandro Prigione, Martin Janz, Altuna Akalin, Michela Di Virgilio
Software Mentions: 4
Published: about 6 years ago

10.3390/cancers13081979

Risk of Pharmacological or Hospital Treatment for Depression in Patients with Colorectal Cancer–Associations with Pre-Cancer Lifestyle, Comorbidity and Clinical Factors
Cited by: 2
Author(s): Trille Kristina Kjær, Ida Rask Moustsen-Helms, Vanna Albieri, Signe Benzon Larsen, Thea Helene Degett, Anne Tjønneland, Christoffer Johansen, Susanne K. Kjær, Ismail Gögenür, Susanne Oksbjerg Dalton
Software Mentions: 4
Published: over 5 years ago

10.1111/acer.14259

Chronic Voluntary Ethanol Drinking in Cynomolgus Macaques Elicits Gene Expression Changes in Prefrontal Cortical Area 46
Cited by: 4
Author(s): Nicole A.R. Walter, Christina Zheng, Robert P. Searles, Shannon K. McWeeney, Kathleen A. Grant, Robert Hitzemann
Software Mentions: 4
Published: over 6 years ago

10.1186/s13195-020-00598-2

Characterization of the chromatin accessibility in an Alzheimer’s disease (AD) mouse model
Cited by: 24
Author(s): Yaqi Wang, Xiaomin Zhang, Shan Qiao, Yuli Hou, Jing Liu, Yu Sun, Peichang Wang
Software Mentions: 4
Published: over 6 years ago

10.1186/s13046-021-02092-5

Activin-A impedes the establishment of CD4+ T cell exhaustion and enhances anti-tumor immunity in the lung
Cited by: 5
Author(s): Ioannis Morianos, Aikaterini Tsitsopoulou, Konstantinos Potaris, Dimitrios Valakos, Ourania Fari, Giannis Vatsellas, Clementine Bostantzoglou, Andreas Photiades, Mina Gaga, Georgina Xanthou, Maria Semitekolou
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12935-020-01525-z

MiR-1231 decrease the risk of cancer-related mortality in patients combined with non-small cell lung cancer and diabetes mellitus
Cited by: 3
Author(s): Jing Li, Jialiang Xu, Zhijun Cao, Shouzuo Du, Luyu Zhang
Software Mentions: 4
Published: almost 6 years ago

10.1016/j.ajhg.2016.05.030

BCL11A Haploinsufficiency Causes an Intellectual Disability Syndrome and Dysregulates Transcription
Cited by: 116
Author(s): Cristina Dias, Sara Busquets Estruch, Sarah A. Graham, Jeremy F. McRae, Stephen J. Sawiak, Jane A. Hurst, Shelagh Joss, Susan Holder, Jenny Morton, Claire Turner, Julien Thévenon, Kelly Mellul, Gabriela Sánchez-Andrade, Ximena Ibarra-Soria, Pelagia Derizioti, Rui F. Santos, Song-Choon Lee, Laurence Faivre, Tjitske Kleefstra, Pentao Liu, Mathew E. Hurles, Simon E. Fisher, Darren W. Logan
Software Mentions: 4
Published: almost 10 years ago

10.1186/s13040-018-0171-y

Connecting genetics and gene expression data for target prioritisation and drug repositioning
Cited by: 20
Author(s): Enrico Ferrero, Pankaj Agarwal
Software Mentions: 4
Published: about 8 years ago

10.3390/ani9121063

Effect of Supplementing Hydrolysable Tannins to a Grower–Finisher Diet Containing Divergent PUFA Levels on Growth Performance, Boar Taint Levels in Back Fat and Intestinal Microbiota of Entire Males
Cited by: 24
Author(s): M. Tretola, Federica Maghin, Paolo Silacci, S. Ampuero, Giuseppe Bee
Software Mentions: 4
Published: over 6 years ago

10.3390/ani11061762

The Equine Faecal Microbiota of Healthy Horses and Ponies in The Netherlands: Impact of Host and Environmental Factors
Cited by: 17
Author(s): M. J. P. Theelen, Roosmarijn E C Luiken, Jaap A. Wagenaar, Marianne Sloet van Oldruitenborgh-Oosterbaan, John W. A. Rossen, Aldert Zomer
Software Mentions: 4
Published: about 5 years ago

10.1186/s12859-021-04180-x

Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets
Cited by: 15
Author(s): Teresita M. Porter, Mehrdad Hajibabaei
Software Mentions: 4
Published: about 5 years ago

10.3389/fncel.2019.00370

Interplay of LIS1 and MeCP2: Interactions and Implications With the Neurodevelopmental Disorders Lissencephaly and Rett Syndrome
Cited by: 10
Author(s): Liraz Keidar, Gabi Gerlitz, Aditya Kshirsagar, Michael Tsoory, Tsviya Olender, Xing Wang, Ying Yang, Yu‐Sheng Chen, Yun‐Gui Yang, Irina Voineagu, Orly Reiner
Software Mentions: 4
Published: almost 7 years ago

10.1186/1471-2105-15-91

Differential meta-analysis of RNA-seq data from multiple studies
Cited by: 88
Author(s): Andrea Rau, Guillemette Marot, Florence Jaffrézic
Software Mentions: 4
Published: over 12 years ago

10.1186/s12859-018-2489-3

A new sequence logo plot to highlight enrichment and depletion
Cited by: 43
Author(s): Kushal Kumar Dey, Dongyue Xie, Matthew Stephens
Software Mentions: 4
Published: over 7 years ago

10.1128/AEM.02470-17

Influence of Pig Farming on the Human Nasal Microbiota: Key Role of Airborne Microbial Communities
Cited by: 59
Author(s): Julia G. Kraemer, Alban Ramette, Suzanne Aebi, Anne Oppliger, Markus Hilty
Software Mentions: 4
Published: over 8 years ago

10.1093/aobpla/plv111

Climate change reduces nectar secretion in two common Mediterranean plants
Cited by: 45
Author(s): Krista Takkis, Thomas Tscheulin, Panagiotis Tsalkatis, Theodora Petanidou
Software Mentions: 4
Published: over 11 years ago

10.1186/s12920-016-0192-7

Integrative regression network for genomic association study
Cited by: 9
Author(s): Reddy Rani Vangimalla, Hyun-Hwan Jeong, Kyung-Ah Sohn
Software Mentions: 4
Published: almost 10 years ago

10.3390/ijerph15102144

Neighborhood Violence Impacts Disease Control and Surveillance: Case Study of Cali, Colombia from 2014 to 2016
Cited by: 6
Author(s): Amy R. Krystosik, Andrew Curtis, A. Desirée LaBeaud, Diana Dávalos, Robinson Pacheco, Paola Buritica, Álvaro Álvarez, Madhav P. Bhatta, Jorge Humberto Rojas Palacios, Mark A. James
Software Mentions: 4
Published: almost 8 years ago

10.1098/rsif.2019.0080

Improved forecasts of influenza-associated hospitalization rates with Google Search Trends
Cited by: 14
Author(s): Sasikiran Kandula, Sen Pei, Jeffrey Shaman
Software Mentions: 4
Published: about 7 years ago

10.1186/s12864-016-3130-3

Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)
Cited by: 15
Author(s): Gladys K. Andino, Michael Gribskov, Denis L. Anderson, Jay D. Evans, Greg J. Hunt
Software Mentions: 4
Published: over 9 years ago

10.1186/s12859-021-04235-z

Putative markers for the detection of early-stage bladder cancer selected by urine metabolomics
Cited by: 11
Author(s): Jia You Lin, Bao Rong Juo, Yu Hsuan Yeh, Shu Hsuan Fu, Yi Ting Chen, Chien Lun Chen, Kun Wu
Software Mentions: 4
Published: about 5 years ago

10.1007/s10654-020-00712-6

Sedentary behaviour in relation to ovarian cancer risk: a systematic review and meta-analysis
Cited by: 13
Author(s): Veronika S. Biller, Michael F. Leitzmann, Anja M. Sedlmeier, Felix Berger, O. Ortmann, Carmen Jochem
Software Mentions: 4
Published: over 5 years ago

10.1186/s12920-018-0378-2

Identification of differential gene expression profile from peripheral blood cells of military pilots with hypertension by RNA sequencing analysis
Cited by: 10
Author(s): Xiaohu Zhao, Shaohua Yang, Yi-Shang Yan, Xin Zhang, Lin Zhang, Bo Jiao, Shuai Jiang, Zhi‐Bin Yu
Software Mentions: 4
Published: about 8 years ago

10.1186/s12864-020-06899-y

The wheat pathogen Zymoseptoria tritici senses and responds to different wavelengths of light
Cited by: 7
Author(s): Cassandra B. McCorison, Stephen B. Goodwin
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12864-016-2801-4

RNA-Seq analysis of Gtf2ird1 knockout epidermal tissue provides potential insights into molecular mechanisms underpinning Williams-Beuren syndrome
Cited by: 8
Author(s): Susan M. Corley, Cesar P Canales, Paulina Carmona-Mora, Veronica Mendoza-Reinosa, Annemiek Beverdam, Edna C. Hardeman, Marc R. Wilkins, Steve Palmer
Software Mentions: 4
Published: about 10 years ago

10.3389/fonc.2021.683282

Development of Nomograms for Predicting Lymph Node Metastasis and Distant Metastasis in Newly Diagnosed T1-2 Non-Small Cell Lung Cancer: A Population-Based Analysis
Cited by: 7
Author(s): Yihong Qi, Shuangshuang Wu, Linghui Tao, Yunfu Shi, Wenjuan Yang, Lina Zhou, Bo Zhang, Jing Li
Software Mentions: 4
Published: almost 5 years ago

10.3390/nu10050558

Assessment of Lactose-Free Diet on the Phalangeal Bone Mineral Status in Italian Adolescents Affected by Adult-Type Hypolactasia
Cited by: 10
Author(s): Alessandro Baldan, Sylvie Tagliati, D Saccomandi, Andrea Brusaferro, Laura Busoli, Andrea Scala, Cristina Malaventura, Giuseppe Maggiore, Caterina Borgna‐Pignatti
Software Mentions: 4
Published: about 8 years ago

10.1186/s12893-020-01033-x

Prognostic factors in patients who underwent surgery for common peroneal nerve injury: a nest case–control study
Cited by: 2
Author(s): Zhenhui Liu, Maimaiaili Yushan, Yanshi Liu, Aihemaitijiang Yusufu
Software Mentions: 4
Published: over 5 years ago

10.1097/MD.0000000000021087

Moxibustion for the side effects of surgical therapy and chemotherapy in patients with gastric cancer
Cited by: 5
Author(s): Shuqing Liu, Jianrong Chen, Yanping Wang, Xu Zhou, Weifeng Zhu
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0252533

Large scale meta-analysis of preclinical toxicity data for target characterisation and hypotheses generation
Cited by: 2
Author(s): Jordi Muñoz‐Muriedas
Software Mentions: 4
Published: about 5 years ago

10.3390/cells10051163

Anthracyclins Increase PUFAs: Potential Implications in ER Stress and Cell Death
Cited by: 9
Author(s): David Balgoma, Fredrik Kullenberg, Carlemi Calitz, Maria Kopsida, Femke Heindryckx, Hans Lennernäs, Mikael Hedeland
Software Mentions: 4
Published: about 5 years ago

10.5116/ijme.5740.4262

Psychometric characterization of the Obstetric Communication Assessment Tool for medical education: a pilot study
Cited by: 2
Author(s): Aldeboran N. Rodriguez, Peter DeWitt, Jennifer Fisher, Kirsten J. Broadfoot, K. Joseph Hurt
Software Mentions: 4
Published: about 10 years ago

10.3389/fonc.2021.736573

Development and Validation of a Clinical Prognostic Nomogram for Esophageal Adenocarcinoma Patients
Cited by: 11
Author(s): Chengchen Shao, Yue Yu, Qi-fan Li, Xiaolong Liu, Haiyan Song, Yi Shen, Jun Yi
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12864-019-6018-1

Transcriptome profile of Corynebacterium pseudotuberculosis in response to iron limitation
Cited by: 19
Author(s): Izabela Coimbra Ibraim, Mariana Teixeira Dornelles Parise, Doglas Parise, Michelle Zibetti Tadra Sfeir, Thiago Luiz de Paula Castro, Alice R. Wattam, Preetam Ghosh, Debmalya Barh, Emannuel Maltempi Souza, Aristóteles Goés-Neto, Anne Cybelle Pinto Gomide, Vasco Azevedo
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12864-019-6147-6

The role of nitric oxide during embryonic wound healing
Cited by: 16
Author(s): Pavel Abaffy, Silvie Tománková, Ravindra Naraine, Mikael Kubista, Radek Šindelka
Software Mentions: 4
Published: over 6 years ago

10.1186/s12864-020-06871-w

Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria
Cited by: 29
Author(s): Alice Feurtey, Cécile Lorrain, Daniel Croll, Christoph Eschenbrenner, Michael Freitag, Michael Habig, Janine Haueisen, Mareike Möller, Klaas Schotanus, Eva H. Stukenbrock
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-021-86720-2

Climate change and anthropogenic food manipulation interact in shifting the distribution of a large herbivore at its altitudinal range limit
Cited by: 8
Author(s): Julius G. Bright Ross, Wibke Peters, Federico Ossi, P. R. Moorcroft, E. Cordano, E. Eccel, Filippo Bianchini, Maurizio Ramanzin, Francesca Cagnacci
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-018-37813-y

Both anti-inflammatory and antiviral properties of novel drug candidate ABX464 are mediated by modulation of RNA splicing
Cited by: 41
Author(s): Audrey Vautrin, Laurent Manchon, Aude Garcel, Noëlie Campos, Laure Lapasset, Abdelhamid Mahdi Laaref, Roman Bruno, Marie Gislard, Emeric Dubois, Didier Scherrer, J Hartmut Ehrlich, Jamal Tazi
Software Mentions: 4
Published: over 7 years ago

10.1016/j.watres.2019.06.075

Spatial ecology of a wastewater network defines the antibiotic resistance genes in downstream receiving waters
Cited by: 93
Author(s): Marcos Quintela-Baluja, Mohamed Abouelnaga, Jesús L. Romalde, Jian‐Qiang Su, Yongjie Yu, Mariano Gomez-Lopez, Barth F. Smets, Yong‐Guan Zhu, David W. Graham
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12864-017-4362-6

Comparative ribosome profiling uncovers a dominant role for translational control in Toxoplasma gondii
Cited by: 20
Author(s): Musa A. Hassan, Juan J. Vasquez, Guo-Liang Chew, Markus Meissner, T. Nicolai Siegel
Software Mentions: 4
Published: over 8 years ago

10.1186/s41065-019-0100-1

A co-expression network for differentially expressed genes in bladder cancer and a risk score model for predicting survival
Cited by: 16
Author(s): Zihao Chen, Guojun Liu, Aslam Hossain, И. Г. Данилова, Mikhail A. Bolkov, Guoqing Liu, Irina A. Tuzankina, Wanlong Tan
Software Mentions: 4
Published: about 7 years ago

10.1098/rstb.2019.0815

The role of human and mosquito behaviour in the efficacy of a house-based intervention
Cited by: 7
Author(s): Antoine M. G. Barreaux, Welbeck A. Oumbouke, N'Guessan Brou, Innocent Z. Tia, Ludovic P. Ahoua Alou, Dimi Théodore Doudou, Alphonsine A. Koffi, Raphaël N’Guessan, Eleanore D. Sternberg, Matthew B. Thomas
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-018-31168-0

Marchantia liverworts as a proxy to plants’ basal microbiomes
Cited by: 41
Author(s): Luis David Alcaraz, Mariana Peimbert, Hugo R. Barajas, Ana Elena Dorantes-Acosta, John L. Bowman, Mario Arteaga-Vázquez
Software Mentions: 4
Published: almost 8 years ago

10.1172/jci.insight.145029

Nrf2 overexpression rescues the RPE in mouse models of retinitis pigmentosa
Cited by: 30
Author(s): David M. Wu, Xuke Ji, Maryna V. Ivanchenko, M. S. Chung, Mary E. Piper, Parimal Rana, Sean K. Wang, Y. Y. Xue, Emma R. West, Sophia R. Zhao, Hongbin Xu, Marcelo Cicconet, Wenjun Xiong, Constance L. Cepko
Software Mentions: 4
Published: over 5 years ago

10.1186/s12864-020-06909-z

Integrating RNA-Seq with GWAS reveals novel insights into the molecular mechanism underpinning ketosis in cattle
Cited by: 23
Author(s): Ze Yan, Hanyu Huang, Ellen Freebern, D. R. dos Santos, Dongmei Dai, Jingfang Si, Chengbin Ma, Jie Cao, Gang Guo, George E. Liu, Li Ma, Lingzhao Fang, Yi Zhang
Software Mentions: 4
Published: about 6 years ago

10.1186/s12864-019-5444-4

The plastid and mitochondrial genomes of Eucalyptus grandis
Cited by: 31
Author(s): Desré Pinard, Alexander Andrew Myburg, Eshchar Mizrachi
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-018-27476-0

Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis)
Cited by: 20
Author(s): Erin D. Scully, Scott M. Geib, Charles J. Mason, John E. Carlson, Ming Tien, Han Yi Chen, Chung‐Jui Tsai, Chung‐Jui Tsai, Kelli Hoover
Software Mentions: 4
Published: about 8 years ago

10.1186/s12866-021-02159-5

Azithromycin and the microbiota of cystic fibrosis sputum
Cited by: 10
Author(s): Nicole Acosta, Christina S. Thornton, Michael G. Surette, Ranjani Somayaji, Laura Rossi, Harvey Rabin, Michael D. Parkins
Software Mentions: 4
Published: over 5 years ago

10.1111/jcmm.16553

Construction of a SUMOylation regulator‐based prognostic model in low‐grade glioma
Cited by: 3
Author(s): Xiaozhi Li, Yutong Meng
Software Mentions: 4
Published: about 5 years ago

10.1186/s12870-014-0276-5

Populus tremula (European aspen) shows no evidence of sexual dimorphism
Cited by: 46
Author(s): Kathryn M. Robinson, Nicolas Delhomme, Niklas Mähler, Bastian Schiffthaler, Jenny Önskog, Benedicte Riber Albrectsen, Pär K. Ingvarsson, Torgeir R. Hvidsten, Stefan Jansson, Nathaniel R. Street
Software Mentions: 4
Published: almost 12 years ago

10.3389/fninf.2017.00010

Automatic and Precise Localization and Cortical Labeling of Subdural and Depth Intracranial Electrodes
Cited by: 29
Author(s): Chaoyi Qin, Zheng Tan, Yali Pan, Yanyan Li, Lin Wang, Liqiang Ren, Wenjing Zhou, Liang Wang
Software Mentions: 4
Published: over 9 years ago

10.3389/fpsyt.2021.682495

Common Data Elements, Scalable Data Management Infrastructure, and Analytics Workflows for Large-Scale Neuroimaging Studies
Cited by: 4
Author(s): Rayus Kuplicki, James Touthang, Obada Al Zoubi, Ahmad Mayeli, Masaya Misaki, NeuroMAP-Investigators, Robin L. Aupperle, T. Kent Teague, Brett A. McKinney, Martin P. Paulus, Jerzy Bodurka
Software Mentions: 4
Published: about 5 years ago

10.1186/s12864-020-6687-9

Stable intronic sequence RNAs (sisRNAs) are selected regions in introns with distinct properties
Cited by: 2
Author(s): Jing Jin, Ximiao He, Elena M. Silva
Software Mentions: 4
Published: over 6 years ago

10.1186/s12870-019-2202-3

Root system traits impact early fire blight susceptibility in apple (Malus × domestica)
Cited by: 11
Author(s): Jugpreet Singh, Jack Fabrizio, Elsa Desnoues, Julliany Pereira Silva, Wolfgang Busch, Awais Khan
Software Mentions: 4
Published: over 6 years ago

10.1016/j.ahj.2016.10.020

Inadequacy of existing clinical prediction models for predicting mortality after transcatheter aortic valve implantation
Cited by: 41
Author(s): Glen P. Martin, Matthew Sperrin, Peter Ludman, Mark de Belder, Chris P Gale, William D. Toff, Neil Moat, Uday Trivedi, Iain Buchan, Mamas A. Mamas
Software Mentions: 4
Published: over 9 years ago

10.18632/oncotarget.11038

Role of the immune system in the peritoneal tumor spread of high grade serous ovarian cancer
Cited by: 33
Author(s): Katharina Auer, Anna Bachmayr-Heyda, Nyamdelger Sukhbaatar, Stefanie Aust, Klaus G. Schmetterer, Samuel M. Meier, Christopher Gerner, Christoph Grimm, Reinhard Horvat, Dietmar Pils
Software Mentions: 4
Published: almost 10 years ago

10.1186/s12864-019-5570-z

Transcriptomic analysis reveals novel downstream regulatory motifs and highly transcribed virulence factor genes of Entamoeba histolytica
Cited by: 18
Author(s): Sarah Naiyer, Devinder Kaur, Jamaluddin Ahamad, Sanjai Singh, Yatendra Pratap Singh, Vivek Thakur, Alok Bhattacharya, Sudha Bhattacharya
Software Mentions: 4
Published: over 7 years ago

10.1186/1471-2164-8-265

Inference of transcriptional regulation using gene expression data from the bovine and human genomes
Cited by: 8
Author(s): Amonida Zadissa, John C. McEwan, Chris M. Brown
Software Mentions: 4
Published: almost 19 years ago

10.1186/s12864-021-07679-y

Global investigation of estrogen-responsive genes regulating lipid metabolism in the liver of laying hens
Cited by: 14
Author(s): Jingyao Ren, Weihua Tian, Keren Jiang, Zhang Wang, Dandan Wang, Zhuanjian Li, Fengbin Yan, Yanbin Wang, Yadong Tian, Kepeng Ou, Hongjun Wang, Xiangtao Kang, Hong Li, Xiaojun Liu
Software Mentions: 4
Published: about 5 years ago

10.7150/jca.41983

Predictive value of hypoxia, metabolism and immune factors for prognosis in hepatocellular carcinoma: a retrospective analysis and multicenter validation study
Cited by: 4
Author(s): Peng Lin, Dong‐Yue Wen, Gang Chen, Yi‐Wu Dang, Yun He, Hong Yang
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pgen.1007978

Fast and flexible linear mixed models for genome-wide genetics
Cited by: 46
Author(s): Daniel E. Runcie, Lorin Crawford
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.ppat.1006391

Microbiota-induced peritrophic matrix regulates midgut homeostasis and prevents systemic infection of malaria vector mosquitoes
Cited by: 114
Author(s): Faye H. Rodgers, Mathilde Gendrin, Claudia A. S. Wyer, George K. Christophides
Software Mentions: 4
Published: about 9 years ago

10.1186/1471-2105-13-317

A Monte Carlo-based framework enhances the discovery and interpretation of regulatory sequence motifs
Cited by: 18
Author(s): Phillip Seitzer, Elizabeth G. Wilbanks, David Larsen, Marc T. Facciotti
Software Mentions: 4
Published: over 13 years ago

10.1186/s12859-019-3243-1

M3S: a comprehensive model selection for multi-modal single-cell RNA sequencing data
Cited by: 8
Author(s): Yu Zhang, Chunli Wan, Pengcheng Wang, Wennan Chang, Yan Huo, Jian Chen, Qin Ma, Sha Cao, Chi Zhang
Software Mentions: 4
Published: over 6 years ago

10.1186/s12879-021-06324-z

Estimating regional prevalence of chronic hepatitis C with a capture-recapture analysis
Cited by: 0
Author(s): Patricia A. M. Kracht, Joop E. Arends, Andy I. M. Hoepelman, Mirjam Kretzschmar
Software Mentions: 4
Published: about 5 years ago