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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s12915-020-00874-5

https://doi.org/10.1186/s12915-020-00874-5

Automated identification of the mouse brain’s spatial compartments from in situ sequencing data

Cited by: 16
Author(s): Gabriele Partel, Markus M. Hilscher, Milli Giorgia, Leslie Solorzano, Anna H. Klemm, Mats Nilsson, Carolina Wählby
Published: almost 5 years ago

Software Mentions 4

cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
pypi: CellProfiler
An open-source application for biological image analysis
Papers that mentioned: 1,504
Very Likely Science (100)
pypi: SpatialDE
Spatial and Temporal DE test
Papers that mentioned: 14
Very Likely Science (100)
pypi: TissUUmaps
TissUUmaps is a lightweight viewer that uses basic web tools to visualize gene expression data or any kind of point data on top of whole slide images.
Papers that mentioned: 2
Very Likely Science (90)