10.15252/emmm.201404874

Non‐invasive prognostic protein biomarker signatures associated with colorectal cancer
Cited by: 42
Author(s): Silvia Šurinová, Lenka Radová, Meena Choi, Josef Srovnal, Hermann Brenner, Olga Vitek, Marián Hajdúch, Ruedi Aebersold
Software Mentions: 5
Published: almost 11 years ago

10.1371/journal.pone.0215050

Does social context impact metacognition? Evidence from stereotype threat in a visual search task
Cited by: 5
Author(s): Thibault Gajdos, Isabelle Régner, Pascal Huguet, Marine Hainguerlot, J.M. Vergnaud, Jérôme Sackur, Vincent de Gardelle
Software Mentions: 5
Published: over 7 years ago

10.3390/microorganisms9091803

Phytate and Microbial Suspension Amendments Increased Soybean Growth and Shifted Microbial Community Structure
Cited by: 5
Author(s): Boshir Ahmed, Jean-Baptiste Floc’h, Lahrach Zakaria, Mohamed Hijri
Software Mentions: 5
Published: almost 5 years ago

10.1371/journal.pone.0217134

Methodological management of end-of-life decision data in intensive care studies: A systematic review of 178 randomized control trials published in seven major journals
Cited by: 2
Author(s): Sébastien Kerever, Alice Jacquens, Violaine Smail‐Faugeron, Étienne Gayat, Matthieu Resche‐Rigon
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0069863

Dynamic Stability of Coral Reefs on the West Australian Coast
Cited by: 37
Author(s): Conrad W. Speed, Russell C. Babcock, Kevin P. Bancroft, L.E. Beckley, Lynda M. Bellchambers, Martial Depczynski, Stuart N. Field, Kim Friedman, James Gilmour, Jean‐Paul A. Hobbs, H. Kobryn, James A. Moore, Christopher D. Nutt, George Shedrawi, Damian P. Thomson, Shaun K. Wilson
Software Mentions: 5
Published: almost 13 years ago

10.1093/ptj/pzab112

Impact of Upper Extremity Impairment and Trunk Control on Self-Care Independence in Children With Upper Motor Neuron Lesions
Cited by: 3
Author(s): Jeffrey W. Keller, Annina Fahr, Jan Lieber, Julia Balzer, Hubertus J. A. van Hedel
Software Mentions: 5
Published: about 5 years ago

10.1186/s13071-017-2277-3

Evaluation of electric nets as means to sample mosquito vectors host-seeking on humans and primates
Cited by: 16
Author(s): Frances M. Hawkes, Benny Obrain Manin, Sui Han Ng, Stephen J. Torr, Chris Drakeley, Tock Hing Chua, Heather M. Ferguson
Software Mentions: 5
Published: almost 9 years ago

10.1093/beheco/araa145

Aerial attack strategies of hawks hunting bats, and the adaptive benefits of swarming
Cited by: 7
Author(s): Caroline H. Brighton, Lillias Zusi, Kathryn McGowan, Morgan Kinniry, Laura N. Kloepper, Graham K. Taylor
Software Mentions: 5
Published: over 5 years ago

10.1186/1741-7007-8-26

Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila
Cited by: 22
Author(s): Carlo G. Artieri, Rama S. Singh
Software Mentions: 5
Published: over 16 years ago

10.1186/s40168-021-01040-x

Joint contributions of the gut microbiota and host genetics to feed efficiency in chickens
Cited by: 49
Author(s): Chaoliang Wen, Wei Yan, Chunning Mai, Zhongyi Duan, Jiangxia Zheng, Chang Sun, Ning Yang
Software Mentions: 5
Published: about 5 years ago

10.3390/metabo11090626

Metabolic Reprogramming of Mammary Epithelial Cells during TGF-β-Induced Epithelial-to-Mesenchymal Transition
Cited by: 5
Author(s): Hua Wang, Sarantos Kostidis, Oleg A. Mayboroda, Martin Giera, Marten Hornsveld, Peter ten Dijke
Software Mentions: 5
Published: almost 5 years ago

10.3389/fgene.2019.00855

Variance-Preserving Estimation of Intensity Values Obtained From Omics Experiments
Cited by: 0
Author(s): Adele Ribeiro, Júlia Maria Pavan Soler, Roberto Hirata
Software Mentions: 5
Published: almost 7 years ago

10.1016/S2589-7500(21)00022-4

Performance of intensive care unit severity scoring systems across different ethnicities in the USA: a retrospective observational study
Cited by: 28
Author(s): Rik Sarkar, Christopher S. Martin, Heather Mattie, Judy Wawira Gichoya, David J. Stone, Leo Anthony Celi
Software Mentions: 5
Published: over 5 years ago

10.1128/mBio.01500-19

Dissecting the Gene Expression, Localization, Membrane Topology, and Function of the Plasmodium falciparum STEVOR Protein Family
Cited by: 38
Author(s): Jan Stephan Wichers, Jochen Scholz, Jan Strauss, Susanne Witt, Andrés Lill, Laura-Isabell Ehnold, Niklas Neupert, Benjamin Liffner, Renke Lühken, Michaela Petter, Stephan Lorenzen, Danny W. Wilson, Christian Löw, Catherine Lavazec, Iris Bruchhaus, Egbert Tannich, Tim‐Wolf Gilberger, Anna Bachmann
Software Mentions: 5
Published: almost 7 years ago

10.1186/s12935-019-0731-3

Potential new biomarkers for endometrial cancer
Cited by: 37
Author(s): Michelle H. Townsend, Zac E. Ence, Abigail M. Felsted, Alyssa Parker, Stephen R. Piccolo, Richard A. Robison, Kim L. O’Neill
Software Mentions: 5
Published: over 7 years ago

10.1186/s12859-017-1462-x

Comparative network stratification analysis for identifying functional interpretable network biomarkers
Cited by: 5
Author(s): Chuanchao Zhang, Juan Liu, Qianqian Shi, Tao Zeng, Luonan Chen
Software Mentions: 5
Published: over 9 years ago

10.1136/bmj.l440

Duration of antibiotic treatment for common infections in English primary care: cross sectional analysis and comparison with guidelines
Cited by: 73
Author(s): Koen B Pouwels, Susan Hopkins, Martin J. Llewelyn, A Sarah Walker, Cliodna McNulty, Julie V. Robotham
Software Mentions: 5
Published: over 7 years ago

10.1186/s12870-021-03151-x

Derived woodiness and annual habit evolved in African umbellifers as alternative solutions for coping with drought
Cited by: 2
Author(s): Kamil E. Frankiewicz, Łukasz Banasiak, Alexei A. Oskolski, A.R. Magee, Mohammad Alsarraf, Paulina Trzeciak, Krzysztof Spalik
Software Mentions: 5
Published: almost 5 years ago

10.3389/fpls.2020.575861

Effect of Inorganic N Top Dressing and Trichoderma harzianum Seed-Inoculation on Crop Yield and the Shaping of Root Microbial Communities of Wheat Plants Cultivated Under High Basal N Fertilization
Cited by: 29
Author(s): María Illescas, M. Belén Rubio, Víctor Hernández-Ruiz, María E. Morán-Diez, Ángel Emilio Martínez de Alba, Carlos Nicolás, Enrique Monte, Rosa Hermosa
Software Mentions: 5
Published: over 5 years ago

10.1111/jcmm.15851

Prognostic and predictive value of a mRNA signature in peripheral T‐cell lymphomas: A mRNA expression analysis
Cited by: 6
Author(s): Jiannan Tu, Zhixing Kuang, Xiaoxiao Xie, Shizhen Wu, Ting Wu, Shengchi Chen
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0041066

Transcriptional Response of Peripheral Blood Mononuclear Cells from Cattle Infected with Mycobacterium bovis
Cited by: 25
Author(s): Federico Carlos Blanco, Marcelo Soria, María Verónica Bianco, Fabiana Bigi
Software Mentions: 5
Published: almost 14 years ago

10.7717/peerj.7177

Population-, sex- and individual level divergence in life-history and activity patterns in an annual killifish
Cited by: 15
Author(s): Eli S.J. Thoré, Arnout Grégoir, Bart Adriaenssens, Charlotte Philippe, Robby Stoks, Luc Brendonck, Tom Pinceel
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0252036

Age-related changes in diffuse optical tomography sensitivity profiles in infancy
Cited by: 5
Author(s): Xiaoxue Fu, John E. Richards
Software Mentions: 5
Published: about 5 years ago

10.3390/jcm9041205

The Integration of qSOFA with Clinical Variables and Serum Biomarkers Improves the Prognostic Value of qSOFA Alone in Patients with Suspected or Confirmed Sepsis at ED Admission
Cited by: 14
Author(s): Filippo Mearelli, Giulia Barbati, Chiara Casarsa, Carlo Giansante, Andrea Breglia, Andrea Spica, Cristina Moras, Gaia Olivieri, Alessandro Agostino Occhipinti, Margherita De Nardo, Francesca Spagnol, Nicola Fiotti, Filippo Giorgio Di Girolamo, Maurizio Ruscio, Luigi Mario Castello, Efrem Colonetti, Rossella Marino, Claudio Ronco, Michela Zanetti, Enrico Lupia, María Lorenza Muiesan, Salvatore Di Somma, Gian Carlo Avanzi, Gianni Biolo
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pone.0189067

Task demands affect spatial reference frame weighting during tactile localization in sighted and congenitally blind adults
Cited by: 13
Author(s): Jonathan T. W. Schubert, Stephanie Badde, Brigitte Röder, Tobias Heed
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0102579

Genomic Models of Short-Term Exposure Accurately Predict Long-Term Chemical Carcinogenicity and Identify Putative Mechanisms of Action
Cited by: 60
Author(s): Daniel Gusenleitner, Scott S. Auerbach, Tisha Melia, Harold F. Gómez, David H. Sherr, Stefano Monti
Software Mentions: 5
Published: almost 12 years ago

10.1186/s12859-018-2115-4

Notos - a galaxy tool to analyze CpN observed expected ratios for inferring DNA methylation types
Cited by: 6
Author(s): Ingo Bulla, Benoît Aliaga, Virginia Lacal, Jan Bulla, Christoph Grunau, Cristian Chaparro
Software Mentions: 5
Published: over 8 years ago

10.1093/cercor/bhy276

Selective Role of the Putamen in Serial Reversal Learning in the Marmoset
Cited by: 18
Author(s): Stacey A. W. Jackson, Nicole K. Horst, Sebastian F.A. Axelsson, Naotaka Horiguchi, Gemma J Cockcroft, Trevor W. Robbins, Angela Roberts
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-017-07238-0

T2DiACoD: A Gene Atlas of Type 2 Diabetes Mellitus Associated Complex Disorders
Cited by: 32
Author(s): Jyoti Rani, Inna Mittal, Atreyi Pramanik, Namita Singh, Namita Dube, Smriti Sharma, Bhanwar Lal Puniya, Muthukurussi Varieth Raghunandanan, Ahmed Mobeen, Srinivasan Ramachandran
Software Mentions: 5
Published: almost 9 years ago

10.1016/j.gdata.2015.07.002

RNAome sequencing delineates the complete RNA landscape
Cited by: 1
Author(s): Kasper Derks, Joris Pothof
Software Mentions: 5
Published: almost 11 years ago

10.1371/journal.pone.0225805

Food from faeces: Evaluating the efficacy of scat DNA metabarcoding in dietary analyses
Cited by: 25
Author(s): David Thuo, Elise M. Furlan, Femke Broekhuis, Joseph Kamau, Kyle Macdonald, Dianne Gleeson
Software Mentions: 5
Published: over 6 years ago

10.1186/s12874-017-0383-8

A comparison of the conditional inference survival forest model to random survival forests based on a simulation study as well as on two applications with time-to-event data
Cited by: 50
Author(s): Justine B. Nasejje, Henry Mwambi, Keertan Dheda, Maia Lesosky
Software Mentions: 5
Published: almost 9 years ago

10.1371/journal.pone.0075578

Role of Alternative Polyadenylation during Adipogenic Differentiation: An In Silico Approach
Cited by: 7
Author(s): Lucía Spangenberg, Alejandro Correa, Bruno Dallagiovanna, Hugo Naya
Software Mentions: 5
Published: over 12 years ago

10.3389/fncom.2020.603765

WGEVIA: A Graph Level Embedding Method for Microcircuit Data
Cited by: 1
Author(s): Xiaomin Wu, Shuvra S. Bhattacharyya, Rong Chen
Software Mentions: 5
Published: over 5 years ago

10.1017/S0033291720000203

Experimentally induced and real-world anxiety have no demonstrable effect on goal-directed behaviour
Cited by: 12
Author(s): Claire M. Gillan, Matilde M. Vaghi, Frank H. Hezemans, Sophia van Ghesel Grothe, Jessica Dafflon, A.B. Brühl, George Savulich, Trevor W. Robbins
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0212108

Drug sensitivity prediction with high-dimensional mixture regression
Cited by: 17
Author(s): Qianyun Li, Runmin Shi, Faming Liang
Software Mentions: 5
Published: over 7 years ago

10.1016/j.ijpsycho.2018.12.001

Transcranial alternating current stimulation at 10 Hz modulates response bias in the Somatic Signal Detection Task
Cited by: 6
Author(s): Matt Craddock, Ekaterini Klepousniotou, Wael El‐Deredy, Ellen Poliakoff, David T. Lloyd
Software Mentions: 5
Published: over 7 years ago

10.1186/s12970-020-00374-5

Effects of Bang® Keto Coffee Energy Drink on Metabolism and Exercise Performance in Resistance-Trained Adults: A Randomized, Double-blind, Placebo-controlled, Crossover Study
Cited by: 4
Author(s): Patrick S. Harty, Matthew T. Stratton, Guillermo Escalante, Christian Rodriguez, Jacob R. Dellinger, Abegale D Williams, Sarah J. White, R. Scott Smith, Baylor A Johnson, Mark B. Sanders, Grant M. Tinsley
Software Mentions: 5
Published: over 6 years ago

10.7150/jca.42736

TOP2A Promotes Tumorigenesis of High-grade Serous Ovarian Cancer by Regulating the TGF-β/Smad Pathway
Cited by: 23
Author(s): Yan Gao, Hongyu Zhao, Meng Ren, Qi Chen, Jie Li, Zhefeng Li, Chenghong Yin, Wentao Yue
Software Mentions: 5
Published: over 6 years ago

10.1186/s13073-016-0315-y

The IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p
Cited by: 34
Author(s): Zsolt Czimmerer, Tamás Varga, Máté Kiss, Cesaré Ovando Vázquez, Quang Minh Doan‐Xuan, Dominik Rückerl, Sudhir Gopal Tattikota, Xin Yan, Zsuzsanna Nagy, Bence Dániel, Szilárd Póliska, Attila Horváth, Gergely Nagy, Éva Várallyay, Matthew N. Poy, Judith E. Allen, Zsolt Bacsó, Cei Abreu‐Goodger, László Nagy
Software Mentions: 5
Published: about 10 years ago

10.1186/gb-2007-8-9-r190

DetectiV: visualization, normalization and significance testing for pathogen-detection microarray data
Cited by: 29
Author(s): Michael Watson, Juliet Dukes, Abu-Bakr Abu-Median, Donald P. King, Paul Britton
Software Mentions: 5
Published: over 19 years ago

10.1371/journal.pone.0058572

Small Hydrophobic Protein of Human Metapneumovirus Does Not Affect Virus Replication and Host Gene Expression In Vitro
Cited by: 19
Author(s): Miranda de Graaf, Sander Herfst, Jamil Aarbiou, Peter C. Burgers, Fatiha Zaaraoui-Boutahar, M Bijl, Wilfred F. J. van IJcken, Eefje J. A. Schrauwen, Albert D. M. E. Osterhaus, Theo M. Luider, Bob J. Scholte, Ron A. M. Fouchier, Arno C. Andeweg
Software Mentions: 5
Published: over 13 years ago

10.1371/journal.pone.0070433

Genome-Wide Expression of Transcriptomes and Their Co-Expression Pattern in Subtropical Maize (Zea mays L.) under Waterlogging Stress
Cited by: 54
Author(s): Nepolean Thirunavukkarasu, Firoz Hossain, Sweta Mohan, Kaliyugam Shiriga, Swati Mittal, R.C. Sharma, Rita Singh, H. S. Gupta
Software Mentions: 5
Published: almost 13 years ago

10.1371/journal.pone.0203751

Seasonal association between ambient ozone and hospital admission for respiratory diseases in Hanoi, Vietnam
Cited by: 28
Author(s): Ly M. T. Luong, Dung Phung, Trần Ngọc Đăng, Peter D. Sly, Lidia Morawska, Phong K. Thai
Software Mentions: 5
Published: almost 8 years ago

10.3390/ijerph17249566

In the Subtropical Monsoon Climate High-Density City, What Features of the Neighborhood Environment Matter Most for Public Health?
Cited by: 5
Author(s): 偉俊 高, Ruoxiang Tu, Hao Li, Yongli Fang, Qingmin Que
Software Mentions: 5
Published: over 5 years ago

10.3390/ijms18081654

A Different Microbiome Gene Repertoire in the Airways of Cystic Fibrosis Patients with Severe Lung Disease
Cited by: 35
Author(s): Giovanni Bacci, Alessio Mengoni, Ersilia Fiscarelli, Nicola Segata, Giovanni Taccetti, Daniela Dolce, Patrizia Paganin, Patrizia Morelli, Vanessa Tuccio Guarna Assanti, A. De Alessandri, Vincenzina Lucidi, Annamaria Bevivino
Software Mentions: 5
Published: almost 9 years ago

10.3390/ijms20010059

We Are What We Eat: A Stoichiometric and Ecometabolomic Study of Caterpillars Feeding on Two Pine Subspecies of Pinus sylvestris
Cited by: 8
Author(s): Albert Rivas‐Ubach, Josep Peñuelas, José A. Hódar, Michal Oravec, Ljiljana Paša‐Tolić, Otmar Urban, Jordi Sardans
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0065267

Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
Cited by: 14
Author(s): Susan Richter, Shona Morrison, Timothy Connor, Jiechuang Su, Cristin G. Print, Ron S. Ronimus, Sean L. McGee, William R. Wilson
Software Mentions: 5
Published: about 13 years ago

10.1007/s10530-017-1610-2

Environmental and ecological factors influencing the spillover of the non-native kelp, Undaria pinnatifida, from marinas into natural rocky reef communities
Cited by: 20
Author(s): Graham Epstein, Dan A. Smale
Software Mentions: 5
Published: over 8 years ago

10.1186/s13071-020-04221-z

Measuring mosquito control: adult-mosquito catches vs egg-trap data as endpoints of a cluster-randomized controlled trial of mosquito-disseminated pyriproxyfen
Cited by: 9
Author(s): Klauss Kleydmann Sabino Garcia, Hanid S. Versiani, Taís O. Araújo, João Paulo Araújo da Conceição, Marcos Takashi Obara, Walter Massa Ramalho, Thaís Tâmara Castro Minuzzi-Souza, Gustavo D. Gomes, Elisa Neves Vianna, Renata Velôzo Timbó, Vinicios G. C. Barbosa, Maridalva S. P. Rezende, Luciana P. F. Martins, Glauco O. Macedo, Bruno Lopes Carvalho, Israel Martins Moreira, Lorrainy A. Bartasson, Nadjar Nitz, Sérgio Luíz Bessa Luz, Rodrigo Gurgel-Gonçalves, Fernando Abad‐Franch
Software Mentions: 5
Published: about 6 years ago

10.7717/peerj.6964

Coastal fish assemblages and predation pressure in northern-central Chilean <i>Lessonia trabeculata</i> kelp forests and barren grounds
Cited by: 10
Author(s): Nicolás Riquelme-Pérez, Catalina A. Musrri, Wolfgang Stotz, Osvaldo Cerda, Oscar Pino-Olivares, Martín Thiel
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0156594

Removing Batch Effects from Longitudinal Gene Expression - Quantile Normalization Plus ComBat as Best Approach for Microarray Transcriptome Data
Cited by: 94
Author(s): Christian Müller, Arne Schillert, Caroline Röthemeier, David‐Alexandre Trégouët, Carole Proust, Harald Binder, Norbert Pfeiffer, Manfred E. Beutel, Karl J. Lackner, Renate B. Schnabel, Laurence Tiret, Philipp S. Wild, Stefan Blankenberg, Tanja Zeller, Andreas Ziegler
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pntd.0008712

Vector competence and feeding-excretion behavior of Triatoma rubrovaria (Blanchard, 1843) (Hemiptera: Reduviidae) infected with Trypanosoma cruzi TcVI
Cited by: 10
Author(s): Thaiane Verly, Stephanie Costa, Nathanielly Rocha Casado de Lima, J Mallet, Francisco Odêncio, Mirian Cláudia de Souza Pereira, Carlos José de Carvalho Moreira, Constança Britto, Márcio G. Pavan
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pntd.0007141

Association of rodent-borne Leptospira spp. with urban environments in Malaysian Borneo
Cited by: 39
Author(s): Kim R. Blasdell, Sergé Morand, David Perera, Cadhla Firth
Software Mentions: 5
Published: over 7 years ago

10.1186/s12889-020-10131-7

The association between ambient temperature and mortality of the coronavirus disease 2019 (COVID-19) in Wuhan, China: a time-series analysis
Cited by: 25
Author(s): Gaopei Zhu, Yuhang Zhu, Zhongli Wang, Weijing Meng, Xiaoxuan Wang, Jianing Feng, Juan Li, Yufei Xiao, Fuyan Shi, Shuzhen Wang
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0245444

The relationship between social support, stressful events, and menopause symptoms
Cited by: 20
Author(s): Megan Arnot, Emily H Emmott, Ruth Mace
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0210795

Effects of moderate thermal anomalies on Acropora corals around Sesoko Island, Okinawa
Cited by: 13
Author(s): Tanya Singh, Mariko Iijima, Ko Yasumoto, Kazuhiko Sakai
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0208982

Cholinergic Receptor Nicotinic Alpha 5 (CHRNA5) RNAi is associated with cell cycle inhibition, apoptosis, DNA damage response and drug sensitivity in breast cancer
Cited by: 11
Author(s): Şahika Cıngır Köker, Ermira Jahja, Huma Shehwana, Ayşe Gökçe Keşküş, Özlen Konu
Software Mentions: 5
Published: over 7 years ago

10.1186/1471-2164-10-63

Comparative analysis of methods for gene transcription profiling data derived from different microarray technologies in rat and mouse models of diabetes
Cited by: 16
Author(s): Steven P. Wilder, Pamela J. Kaisaki, Karène Argoud, Anita Salhan, Jiannis Ragoussis, Marie-Thérèse Bihoreau, Dominique Guyader
Software Mentions: 5
Published: over 17 years ago

10.1371/journal.pone.0163773

No Compensatory Relationship between the Innate and Adaptive Immune System in Wild-Living European Badgers
Cited by: 8
Author(s): Simon Yung Wa Sin, Chris Newman, Hannah L. Dugdale, Christina D. Buesching, Maria‐Elena Mannarelli, Geetha Annavi, Terry Burke, David W. Macdonald
Software Mentions: 5
Published: almost 10 years ago

10.1038/s41598-020-71355-6

Combining genetic markers with stable isotopes in otoliths reveals complexity in the stock structure of Atlantic bluefin tuna (Thunnus thynnus)
Cited by: 16
Author(s): Deirdre Brophy, Naiara Rodríguez-Ezpeleta, Igaratza Fraile, Haritz Arrizabalaga
Software Mentions: 5
Published: almost 6 years ago

10.1186/s12864-016-2851-7

The application of transcriptomic data in the authentication of beef derived from contrasting production systems
Cited by: 6
Author(s): T. Sweeney, Alexandre Lejeune, A.P. Moloney, Frank J. Monahan, Paul M Gettigan, Gérard Downey, Stephen D. E. Park, M. F. Ryan
Software Mentions: 5
Published: almost 10 years ago

10.1371/journal.pone.0130738

What Determines Habitat Quality for a Declining Woodland Bird in a Fragmented Environment: The Grey-Crowned Babbler Pomatostomus temporalis in South-Eastern Australia?
Cited by: 9
Author(s): Kate P. Stevens, Greg J. Holland, Rohan H. Clarke, Raylene Cooke, Andrew F. Bennett
Software Mentions: 5
Published: about 11 years ago

10.1038/s41598-018-21401-1

Birds and beans: Comparing avian richness and endemism in arabica and robusta agroforests in India’s Western Ghats
Cited by: 9
Author(s): Charlotte H. Chang, Krithi K. Karanth, Paul Robbins
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0239485

Does behavioral thermal tolerance predict distribution pattern and habitat use in two sympatric Neotropical frogs?
Cited by: 9
Author(s): Juan C. Díaz‐Ricaurte, Filipe C. Serrano, Estefany Carolíne Guevara-Molina, Cybele de Oliveira Araújo, Marcio Roberto Martins
Software Mentions: 5
Published: almost 6 years ago

10.1186/1471-2164-15-132

Major aging-associated RNA expressions change at two distinct age-positions
Cited by: 17
Author(s): Marius Gheorghe, M.M.J. Snoeck, Michael Emmerich, Thomas Bäck, Jelle J. Goeman, Vered Raz
Software Mentions: 5
Published: over 12 years ago

10.1186/1471-2164-11-723

Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications
Cited by: 66
Author(s): José M. Otero, Wanwipa Vongsangnak, Mohammad Ali Asadollahi, Roberto Olivares-Hernandes, Jérôme Maury, Laurent Farinelli, Loïc Barlocher, Magne Østerås, Michel Schalk, Anthony Clark, Jens Nielsen
Software Mentions: 5
Published: over 15 years ago

10.1002/ece3.6553

Divergent estimates of herd‐wide caribou calf survival: Ecological factors and methodological biases
Cited by: 1
Author(s): E. Hance Ellington, Keith P. Lewis, Erin L. Koen, Eric Vander Wal
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0143122

Forecasting the Effects of Fertility Control on Overabundant Ungulates: White-Tailed Deer in the National Capital Region
Cited by: 24
Author(s): Ann Raiho, Mevin B. Hooten, Scott C. Bates, N. Thompson Hobbs
Software Mentions: 5
Published: over 10 years ago

10.1002/ece3.6806

Consequences of multiple imputation of missing standard deviations and sample sizes in meta‐analysis
Cited by: 21
Author(s): Stephan Kambach, Helge Bruelheide, Katharina Gerstner, Jessica Gurevitch, Michael Beckmann, Ralf Seppelt
Software Mentions: 5
Published: almost 6 years ago

10.1186/s12885-016-2178-4

Genetic and cellular studies highlight that A Disintegrin and Metalloproteinase 19 is a protective biomarker in human prostate cancer
Cited by: 13
Author(s): Gerard F. Hoyne, Caoline Rudnicka, Qing‐Xiang Amy Sang, Mark D. Roycik, Sarah Howarth, Peter J. Leedman, Markus P. Schlaich, Patrick A. Candy, Vance B. Matthews
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0188384

Introduced bullfrog facilitates pathogen invasion in the western United States
Cited by: 35
Author(s): Tiffany A. Yap, Michelle S. Koo, Richard F. Ambrose, Vance T. Vredenburg
Software Mentions: 5
Published: about 8 years ago

10.1038/s41598-020-60932-4

An empirical comparison of neural networks and machine learning algorithms for EEG gait decoding
Cited by: 44
Author(s): Sho Nakagome, Trieu Phat Luu, Yongtian He, Akshay Sujatha Ravindran, José L. Contreras-Vidal
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0142813

Spatial Scaling of Environmental Variables Improves Species-Habitat Models of Fishes in a Small, Sand-Bed Lowland River
Cited by: 20
Author(s): Johannes Radinger, Christian Wolter, Jochem Kail
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0195221

Delineation and mapping of coastal shark habitat within a shallow lagoonal estuary
Cited by: 10
Author(s): Charles W. Bangley, Lee M. Paramore, Simon Dedman, Roger A. Rulifson
Software Mentions: 5
Published: over 8 years ago

10.1098/rsos.200975

Maths attitudes, school affect and teacher characteristics as predictors of maths attainment trajectories in primary and secondary education
Cited by: 6
Author(s): Danielle Evans, Andy P. Field
Software Mentions: 5
Published: almost 6 years ago

10.3390/ijerph18168375

Comparison of Missing Data Infilling Mechanisms for Recovering a Real-World Single Station Streamflow Observation
Cited by: 8
Author(s): Thelma Dede Baddoo, Zhijia Li, Samuel Nii Odai, Kenneth Rodolphe Chabi Boni, Isaac Kwesi Nooni, Samuel A. Andam-Akorful
Software Mentions: 5
Published: almost 5 years ago

10.1093/gigascience/giy052

Optimized distributed systems achieve significant performance improvement on sorted merging of massive VCF files
Cited by: 3
Author(s): Xiaobo Sun, Jingjing Gao, Peng Jin, Celeste Eng, Esteban G. Burchard, Terri H. Beaty, Ingo Ruczinski, Rasika A. Mathias, Kathleen C. Barnes, Fusheng Wang, Zhaohui S. Qin
Software Mentions: 5
Published: about 8 years ago

10.1371/journal.pcbi.0030026

Functional Impact of Missense Variants in BRCA1 Predicted by Supervised Learning
Cited by: 56
Author(s): Rachel Karchin, Alvaro N.A. Monteiro, Sean V. Tavtigian, Marcelo A. Carvalho, Andrej S̆ali
Software Mentions: 5
Published: over 19 years ago

10.1093/bioinformatics/btx727

Modeling positional effects of regulatory sequences with spline transformations increases prediction accuracy of deep neural networks
Cited by: 31
Author(s): Žiga Avsec, Mohammadamin Barekatain, Jianghua Cheng
Software Mentions: 5
Published: over 8 years ago

10.1128/mSphere.00982-20

Decreased Ecological Resistance of the Gut Microbiota in Response to Clindamycin Challenge in Mice Colonized with the Fungus Candida albicans
Cited by: 2
Author(s): Laura Markey, Antonia Pugliese, Theresa Tian, Farrah Roy, Kyongbum Lee, Carol A. Kumamoto
Software Mentions: 5
Published: over 5 years ago

10.1186/s13104-016-2331-9

Differential correlation for sequencing data
Cited by: 18
Author(s): Charlotte Siska, Katerina Kechris
Software Mentions: 5
Published: over 9 years ago

10.7717/peerj.11531

The impact of PIT tags on the growth and survival of pythons is insignificant in randomised controlled trial
Cited by: 2
Author(s): Patrick L. Taggart, Stephen Morris, Charles Caraguel
Software Mentions: 5
Published: about 5 years ago

10.1186/s13071-021-04967-0

Effects of insemination and blood-feeding on locomotor activity of wild-derived females of the malaria mosquito Anopheles coluzzii
Cited by: 4
Author(s): Amadou S Traoré, Angélique Porciani, Nicolas Moiroux, Roch K. Dabiré, Frédéric Simard, Carlo Costantini, Karine Mouline
Software Mentions: 5
Published: almost 5 years ago

10.1016/j.agee.2018.10.008

Moth responses to sympathetic hedgerow management in temperate farmland
Cited by: 16
Author(s): Jérémy S.P. Froidevaux, Moth Broyles, Gareth Jones
Software Mentions: 5
Published: over 7 years ago

10.3389/fgene.2021.648898

A Novel Method to Identify the Differences Between Two Single Cell Groups at Single Gene, Gene Pair, and Gene Module Levels
Cited by: 1
Author(s): Lingyu Cui, Bo Wang, Caixia Ren, Ailan Wang, Hong An, Wei Liang
Software Mentions: 5
Published: over 5 years ago

10.1155/2020/3451610

A Pipeline to Call Multilevel Expression Changes between Cancer and Normal Tissues and Its Applications in Repurposing Drugs Effective for Gastric Cancer
Cited by: 3
Author(s): Wei Gao, Jun Yang, Changhua Zhuo, Sha Huang, Lin Jia, Guangfeng Wu, Min Zhou
Software Mentions: 5
Published: almost 6 years ago

10.1107/S0907444913022750

<i>Phaser.MRage</i>: automated molecular replacement
Cited by: 204
Author(s): G. Bunkóczi, Nathaniel Echols, Airlie J. McCoy, Robert D. Oeffner, Paul D. Adams, Randy J. Read
Software Mentions: 5
Published: over 12 years ago

10.1371/journal.pntd.0005701

The interplay of climate, intervention and imported cases as determinants of the 2014 dengue outbreak in Guangzhou
Cited by: 30
Author(s): Qu Cheng, Qinlong Jing, Robert C. Spear, John M. Marshall, Zhicong Yang, Peng Gong
Software Mentions: 5
Published: about 9 years ago

10.1107/S2059798318003455

Recent developments in<i>MrBUMP</i>: better search-model preparation, graphical interaction with search models, and solution improvement and assessment
Cited by: 34
Author(s): Ronan Keegan, Stuart McNicholas, Jens M. H. Thomas, Adam J Simpkin, Felix Šimkovic, Ville Uski, Charles Ballard, Martyn Winn, K.S. Wilson, Daniel J. Rigden
Software Mentions: 5
Published: over 8 years ago

10.1186/s12859-015-0475-6

Pheno2Geno - High-throughput generation of genetic markers and maps from molecular phenotypes for crosses between inbred strains
Cited by: 9
Author(s): Konrad Zych, Yang Li, Joeri K. van der Velde, Ronny V.L. Joosen, Wilco Ligterink, Ritsert C. Jansen, Danny Arends
Software Mentions: 5
Published: over 11 years ago

10.3390/insects11110811

Search for Alternative Control Strategies of Drosophila suzukii (Diptera: Drosophilidae): Laboratory Assays Using Volatile Natural Plant Compounds
Cited by: 7
Author(s): Astrid Eben, Frank Sporer, Heidrun Vogt, Bernhard Wetterauer, Michael Wink
Software Mentions: 5
Published: over 5 years ago

10.1186/s13148-021-01035-3

Epigenetic age acceleration is associated with cardiometabolic risk factors and clinical cardiovascular disease risk scores in African Americans
Cited by: 29
Author(s): Farah Ammous, Wei Zhao, Scott Ratliff, Thomas H. Mosley, Lawrence F. Bielak, Xiang Zhou, Patricia A. Peyser, Sharon L.R. Kardia, Jennifer A. Smith
Software Mentions: 5
Published: over 5 years ago

10.3390/cancers11121951

Novel and Rare Fusion Transcripts Involving Transcription Factors and Tumor Suppressor Genes in Acute Myeloid Leukemia
Cited by: 17
Author(s): Antonella Padella, Giorgia Simonetti, Giulia Paciello, George Giotopoulos, Carmen Baldazzi, Simona Righi, Martina Ghetti, Anna Stengel, Viviana Guadagnuolo, Rossella De Tommaso, Cristina Papayannidis, Valentina Robustelli, Eugenia Franchini, Andrea Ghelli Luserna di Rorà, Anna Ferrari, Maria Chiara Fontana, Samantha Bruno, Emanuela Ottaviani, Simona Soverini, Clelia Tiziana Storlazzi, Claudia Haferlach, Elena Sabattini, Nicoletta Testoni, Ilaria Iacobucci, Brian J.P. Huntly, Elisa Ficarra, Giovanni Martinelli
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0234985

Effect of TSH on Non-Alcoholic Fatty Liver Disease (NAFLD) independent of obesity in children of predominantly Hispanic/Latino ancestry by causal mediation analysis
Cited by: 4
Author(s): Presley Nichols, Yue Pan, Benjamin May, Martina Pavlicová, John C. Rausch, Ali Mencin, Vidhu Thaker
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pgen.1009121

A frog with three sex chromosomes that co-mingle together in nature: Xenopus tropicalis has a degenerate W and a Y that evolved from a Z chromosome
Cited by: 20
Author(s): Benjamin L. S. Furman, Caroline M S Cauret, Martin Knytl, Xuhong Song, Tharindu Premachandra, Caleb Ofori‐Boateng, Danielle C. Jordan, Marko E. Horb, Ben Evans
Software Mentions: 5
Published: over 5 years ago

10.3390/ijms22115858

Calreticulin Deficiency Disturbs Ribosome Biogenesis and Results in Retardation in Embryonic Kidney Development
Cited by: 4
Author(s): Nazli Serin, Gry H. Dihazi, Asima Tayyeb, Christof Lenz, Gerhard A. Müller, Michael Zeisberg, Hassan Dihazi
Software Mentions: 5
Published: about 5 years ago

10.3389/fpsyg.2019.02187

Visual Exploration of Dynamic or Static Joint Attention Bids in Children With Autism Syndrome Disorder
Cited by: 10
Author(s): Federica Cilia, Alexandre Aubry, Barbara Le Driant, Béatrice Bourdin, Luc Vandromme
Software Mentions: 5
Published: almost 7 years ago

10.3389/fphys.2021.585089

Characterization of Chicken Skin Yellowness and Exploration of Genes Involved in Skin Yellowness Deposition in Chicken
Cited by: 9
Author(s): Jingwen Wu, Zetong Lin, Chen Geng-Hua, Qianyi Luo, Qinghua Nie, Xiquan Zhang, Wen Luo
Software Mentions: 5
Published: over 5 years ago

10.1007/s00213-019-05218-y

Microbe and host interaction in gastrointestinal homeostasis
Cited by: 18
Author(s): Rachael Horne, James St. Pierre, Sufian Odeh, Michael G. Surette, Jane A. Foster
Software Mentions: 5
Published: over 7 years ago