Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.11376

https://doi.org/10.7717/peerj.11376

Cited by: 4
Author(s): Natasha Pavlovikj, João Carlos Gomes-Neto, Jitender S. Deogun, Andrew K. Benson
Published: almost 3 years ago

Software Mentions 12

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
cran: yaml
Methods to Convert R Data to YAML and Back
Papers that mentioned: 14
pypi: conda
OS-agnostic, system-level binary package manager.
Papers that mentioned: 92
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
pypi: parallel-fastq-dump
parallel fastq-dump wrapper
Papers that mentioned: 2
pypi: seaborn
Statistical data visualization
Papers that mentioned: 283
pypi: yaml
Papers that mentioned: 14