Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.60188

https://doi.org/10.7554/eLife.60188

Combined transient ablation and single-cell RNA-sequencing reveals the development of medullary thymic epithelial cells

Cited by: 42
Author(s): Kristen L. Wells, Corey N. Miller, Andreas R. Gschwind, Wei Wu, Jonah D Phipps, Mark S. Anderson, Lars M. Steinmetz
Published: almost 4 years ago

Software Mentions 9

bioconductor: DropletUtils

Utilities for Handling Single-Cell Droplet Data
Papers that mentioned: 14

bioconductor: scran

Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113

cran: fasta

Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: Seurat

Tools for Single Cell Genomics
Papers that mentioned: 1,512

pypi: fasta

The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848

pypi: package

package is a package to package your package
Papers that mentioned: 1,300

pypi: scvelo

RNA velocity generalized through dynamical modeling
Papers that mentioned: 9

pypi: velocyto

RNA velocity analysis for single cell RNA-seq data
Papers that mentioned: 25