Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7150/thno.52717

https://doi.org/10.7150/thno.52717

m<sup>6</sup>A regulator-based methylation modification patterns characterized by distinct tumor microenvironment immune profiles in colon cancer

Cited by: 135
Author(s): Wei Chong, Liang Shang, Jin Liu, Zhen Fang, Fengying Du, Hao Wu, Liu Yang, Zhe Wang, Chen Yang, Shengtao Jia, Liming Chen, Leping Li, Hao Chen
Published: almost 4 years ago

Software Mentions 7

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: maftools
Summarize, Analyze and Visualize MAF Files
Papers that mentioned: 288
cran: caret
Classification and Regression Training
Papers that mentioned: 630
cran: timeROC
Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254
pypi: caret
A Python Interface to Asterisk
Papers that mentioned: 630
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893