Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/microorganisms8040485

https://doi.org/10.3390/microorganisms8040485

Cited by: 33
Author(s): Carmela Nardelli, Ilaria Granata, Valeria D’Argenio, Salvatore Tramontano, Debora Compare, Mario Rosario Guarracino, Gerardo Nardone, Vincenzo Pilone, Lucia Sacchetti
Published: about 4 years ago

Software Mentions 8

bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: caTools
Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc
Papers that mentioned: 52
cran: FSA
Simple Fisheries Stock Assessment Methods
Papers that mentioned: 225
cran: phangorn
Phylogenetic Reconstruction and Analysis
Papers that mentioned: 192
pypi: FSA
Finite State Automaton library
Papers that mentioned: 225
pypi: package
package is a package to package your package
Papers that mentioned: 1,300