Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/microorganisms7090315

https://doi.org/10.3390/microorganisms7090315

Dual RNA-Seq Analysis of the Pine-Fusarium circinatum Interaction in Resistant (Pinus tecunumanii) and Susceptible (Pinus patula) Hosts

Cited by: 17
Author(s): Erik A. Visser, Jill L. Wegrzyn, Emma Theodora Steenkamp, Alexander Andrew Myburg, Sanushka Naidoo
Published: about 5 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
cran: Mercator
Clustering and Visualizing Distance Matrices
Papers that mentioned: 347
pypi: diamond
Smart data producer for graphite graphing package
Papers that mentioned: 68