Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/jpm11080785

https://doi.org/10.3390/jpm11080785

Inference of an Integrative, Executable Network for Rheumatoid Arthritis Combining Data-Driven Machine Learning Approaches and a State-of-the-Art Mechanistic Disease Map

Cited by: 10
Author(s): Quentin Miagoux, Vidisha Singh, Dereck de Mézquita, Valérie Chaudru, Mohamed Elati, Élisabeth Petit-Teixeira, Anna Niarakis
Published: about 3 years ago

Software Mentions 5

bioconductor: CoRegNet
CoRegNet : reconstruction and integrated analysis of co-regulatory networks
Papers that mentioned: 8
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: SMBL
SnakeMake Bioinformatics Library.
Papers that mentioned: 20