Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms22052244

https://doi.org/10.3390/ijms22052244

The Distribution of Several Genomic Virulence Determinants Does Not Corroborate the Established Serotyping Classification of Bacillus thuringiensis

Cited by: 4
Author(s): Anton E. Shikov, Yury V. Malovichko, Arseniy Lobov, Maria Belousova, Anton A. Nizhnikov, Kirill S. Antonets
Published: over 3 years ago

Software Mentions 16

bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: ggfortify
Data Visualization Tools for Statistical Analysis Results
Papers that mentioned: 132
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: minimap
Create Tile Grid Maps
Papers that mentioned: 47
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: ete3
A Python Environment for (phylogenetic) Tree Exploration
Papers that mentioned: 28
pypi: mash
Python lib for converting dict to objects recursive
Papers that mentioned: 28
pypi: minimap
"Generate minimaps of your code"
Papers that mentioned: 47
pypi: package
package is a package to package your package
Papers that mentioned: 1,300
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105