Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms21114045

https://doi.org/10.3390/ijms21114045

Gut–Brain Axis and Neurodegeneration: State-of-the-Art of Meta-Omics Sciences for Microbiota Characterization

Cited by: 43
Author(s): Bruno Tilocca, Luisa Pieroni, Alessio Soggiu, Domenico Britti, L. Bonizzi, Paola Roncada, Viviana Greco
Published: over 4 years ago

Software Mentions 3

cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
cran: IMP
Interactive Model Performance Evaluation
Papers that mentioned: 172
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306