Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms19061808

https://doi.org/10.3390/ijms19061808

Co-Expression Network Analysis of AMPK and Autophagy Gene Products during Adipocyte Differentiation

Cited by: 8
Author(s): Mahmoud Ahmed, Jin Seok Hwang, Trang Huyen Lai, Sahib Zada, Huynh Quoc Nguyen, Trang Min Pham, Miyong Yun, Deok Ryong Kim
Published: over 6 years ago

Software Mentions 7

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: GEOmetadb
A compilation of metadata from NCBI GEO
Papers that mentioned: 27
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: STRINGdb
STRINGdb - Protein-Protein Interaction Networks and Functional Enrichment Analysis
Papers that mentioned: 82
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555