Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/genes12071044

https://doi.org/10.3390/genes12071044

CircIMPACT: An R Package to Explore Circular RNA Impact on Gene Expression and Pathways

Cited by: 3
Author(s): Alessia Buratin, Enrico Gaffo, Anna Dal Molin, Stefania Bortoluzzi
Published: over 3 years ago

Software Mentions 15

bioconductor: ComplexHeatmap

Make Complex Heatmaps
Papers that mentioned: 565

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: SummarizedExperiment

SummarizedExperiment container
Papers that mentioned: 52

cran: caret

Classification and Regression Training
Papers that mentioned: 630

cran: circlize

Circular Visualization
Papers that mentioned: 260

cran: data.table

Extension of 'data.frame'
Papers that mentioned: 33

cran: dplyr

A Grammar of Data Manipulation
Papers that mentioned: 1,213

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: kableExtra

Construct Complex Table with 'kable' and Pipe Syntax
Papers that mentioned: 21

cran: knitr

A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157

cran: magrittr

A Forward-Pipe Operator for R
Papers that mentioned: 107

cran: rmarkdown

Dynamic Documents for R
Papers that mentioned: 38

cran: Rtsne

T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255

cran: sparkline

'jQuery' Sparkline 'htmlwidget'
Papers that mentioned: 1

pypi: caret

A Python Interface to Asterisk
Papers that mentioned: 630