Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cells9122566

https://doi.org/10.3390/cells9122566

Comparative Transcriptomics Analyses in Livers of Mice, Humans, and Humanized Mice Define Human-Specific Gene Networks

Cited by: 13
Author(s): Cuiping Jiang, Ping Li, Xiangbo Ruan, Yonghe Ma, Kenji Kawai, Hiroshi Suemizu, Haiming Cao
Published: almost 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
cran: MEGENA
Multiscale Clustering of Geometrical Network
Papers that mentioned: 23
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893