Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cells10061292

https://doi.org/10.3390/cells10061292

Effect of Differences in the Microbiome of Cyp17a1-Deficient Mice on Atherosclerotic Background

Cited by: 1
Author(s): Axel Künstner, Rédouane Aherrahrou, Misa Hirose, Petra Bruse, Saleh M. Ibrahim, Hauke Busch, Jeanette Erdmann, Zouhair Aherrahrou
Published: over 3 years ago

Software Mentions 15

bioconductor: ALDEx2
Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account
Papers that mentioned: 136
bioconductor: ANCOMBC
Microbiome differential abudance and correlation analyses with bias correction
Papers that mentioned: 2
bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
bioconductor: KEGGREST
Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
Papers that mentioned: 75
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: dabestr
Data Analysis using Bootstrap-Coupled Estimation
Papers that mentioned: 16
cran: enrichR
Provides an R Interface to 'Enrichr'
Papers that mentioned: 60
cran: estimatr
Fast Estimators for Design-Based Inference
Papers that mentioned: 3
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: patchwork
The Composer of Plots
Papers that mentioned: 38
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: patchwork
Deployment/sysadmin operations, powered by Fabric
Papers that mentioned: 38