Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers13010105

https://doi.org/10.3390/cancers13010105

Analysis of the TCGA Dataset Reveals that Subsites of Laryngeal Squamous Cell Carcinoma Are Molecularly Distinct

Cited by: 6
Author(s): Alana Sorgini, Hugh Andrew Jinwook Kim, Peter YF. Zeng, M.A.Q. Shaikh, Neil Mundi, Farhad Ghasemi, Eric Di Gravio, Halema Khan, Danielle MacNeil, Michael A. Khan, Adrian Mendez, John Yoo, Kevin Fung, Pencilla Lang, Joe S. Mymryk, John W. Barrett, Krupal Patel, Paul C. Boutros, Anthony C. Nichols
Published: almost 4 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: maftools
Summarize, Analyze and Visualize MAF Files
Papers that mentioned: 288
bioconductor: TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Papers that mentioned: 276