Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/biom11030449

https://doi.org/10.3390/biom11030449

RNA-seq Characterization of Melanoma Phenotype Switch in 3D Collagen after p38 MAPK Inhibitor Treatment

Cited by: 1
Author(s): Vladimı́r Čermák, Aneta Škarková, Ladislav Merta, Veronika Kolomazníková, Veronika Palušová, Stjepan Uldrijan, Daniel Rösel, Jan Brábek
Published: over 3 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: NormqPCR
Functions for normalisation of RT-qPCR data
Papers that mentioned: 33
bioconductor: ReadqPCR
Read qPCR data
Papers that mentioned: 12
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759