Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fvets.2020.547181

https://doi.org/10.3389/fvets.2020.547181

Cited by: 9
Author(s): Catherine Turcotte, Alexandre Thibodeau, Sylvain Quessy, Edward Topp, Guy Beauchamp, Philippe Fravalo, Marie Archambault, Marie-Lou Gaucher
Published: over 3 years ago

Software Mentions 23

bioconductor: Maaslin2
"Multivariable Association Discovery in Population-scale Meta-omics Studies"
Papers that mentioned: 8
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: data.table
Extension of 'data.frame'
Papers that mentioned: 33
cran: devtools
Tools to Make Developing R Packages Easier
Papers that mentioned: 157
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
cran: phangorn
Phylogenetic Reconstruction and Analysis
Papers that mentioned: 192
cran: plotly
Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163
cran: reshape2
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
cran: scales
Scale Functions for Visualization
Papers that mentioned: 104
cran: stringr
Simple, Consistent Wrappers for Common String Operations
Papers that mentioned: 172
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: devtools
Python's missing debug print command, and more.
Papers that mentioned: 157
pypi: grid
Volumetric data module
Papers that mentioned: 137
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: plotly
An open-source, interactive data visualization library for Python
Papers that mentioned: 163
pypi: scales
Stats for Python processes
Papers that mentioned: 104