Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fonc.2021.672928

https://doi.org/10.3389/fonc.2021.672928

Cited by: 13
Author(s): Xiangming Cai, Feng Yuan, Junhao Zhu, Jin Yang, Chao Tang, Zixiang Cong, Chiyuan Ma
Published: about 3 years ago

Software Mentions 11

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
cran: corrgram
Plot a Correlogram
Papers that mentioned: 56
cran: ggfortify
Data Visualization Tools for Statistical Analysis Results
Papers that mentioned: 132
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
cran: timeROC
Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254
pypi: ggplot
ggplot for python
Papers that mentioned: 796
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893