Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3389/fonc.2020.555632
https://doi.org/10.3389/fonc.2020.555632
Cited by: 8
Author(s): Liang Zhao, Jiayue Zhang, Zhiyuan Liu, Yu Wang, Shurui Xuan, Peng Zhao
Published: over 3 years ago
Software Mentions 16
bioconductor: CancerSubtypes
Cancer subtypes identification, validation and visualization based on multiple genomic data setsPapers that mentioned: 22
bioconductor: DeMixT
Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platformsPapers that mentioned: 5
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq dataPapers that mentioned: 893
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear ModelsPapers that mentioned: 1,607
cran: timeROC
Time-Dependent ROC Curve and AUC for Censored Survival DataPapers that mentioned: 254
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting SetsPapers that mentioned: 319
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.Papers that mentioned: 893