Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3389/fonc.2019.00119
https://doi.org/10.3389/fonc.2019.00119
Leveraging Spatial Variation in Tumor Purity for Improved Somatic Variant Calling of Archival Tumor Only Samples
Cited by: 15
Author(s): Rebecca F. Halperin, Winnie S. Liang, Sidharth Kulkarni, Erica E. Tassone, Jonathan Adkins, Daniel Enríquez, Nhan L. Tran, Nicole C. Hank, James Newell, Chinnappa D. Kodira, Ronald L. Korn, Michael E. Berens, Kim S, Sara A. Byron
Published: over 5 years ago
Software Mentions 2
bioconductor: PureCN
Copy number calling and SNV classification using targeted short read sequencingPapers that mentioned: 11
pypi: SomVarIUS
A Python utility for calling somatic mutations from a BAM or SAM filePapers that mentioned: 6