Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmolb.2021.711733

https://doi.org/10.3389/fmolb.2021.711733

Isoform Age - Splice Isoform Profiling Using Long-Read Technologies

Cited by: 25
Author(s): Ricardo De Paoli-Iseppi, Josie Gleeson, Michael B. Clark
Published: over 3 years ago

Software Mentions 2

bioconductor: FLAMES
FLAMES: Full Length Analysis of Mutations and Splicing in long read RNA-seq data
Papers that mentioned: 2
pypi: NanoCount
NanoCount estimates transcripts abundance from Oxford Nanopore *direct-RNA sequencing* datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads
Papers that mentioned: 2