Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2019.00144

https://doi.org/10.3389/fmicb.2019.00144

Cited by: 70
Author(s): Laura M. Carroll, Manjarí Mukherjee, David Nicholas, Lisa A. Mingle, Nellie B. Dumas, Jocelyn A. Cole, Jasna Kovač
Published: over 5 years ago

Software Mentions 12

bioconductor: ggtree

an R package for visualization of tree and annotation data
Papers that mentioned: 474

cran: ape

Analyses of Phylogenetics and Evolution
Papers that mentioned: 918

cran: docopt

Command-Line Interface Specification Language
Papers that mentioned: 5

cran: ips

Interfaces to Phylogenetic Software in R
Papers that mentioned: 10

cran: phylobase

Base Package for Phylogenetic Structures and Comparative Data
Papers that mentioned: 29

cran: phytools

Phylogenetic Tools for Comparative Biology (and Other Things)
Papers that mentioned: 586

cran: stringr

Simple, Consistent Wrappers for Common String Operations
Papers that mentioned: 172

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: ape

A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918

pypi: docopt

Pythonic argument parser, that will make you smile
Papers that mentioned: 5

pypi: ips

UNKNOWN
Papers that mentioned: 10

pypi: phytools

Useful tools for physicists.
Papers that mentioned: 586