Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2015.00104

https://doi.org/10.3389/fmicb.2015.00104

Cited by: 237
Author(s): Kristen M. DeAngelis, Grace Pold, Begüm D. Topçuoğlu, Linda T. A. van Diepen, Rebecca Varney, Jeffrey L. Blanchard, Jerry M. Melillo, Serita D. Frey
Published: over 9 years ago

Software Mentions 15

bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: BEST
Bayesian Estimation Supersedes the t-Test
Papers that mentioned: 382
cran: caret
Classification and Regression Training
Papers that mentioned: 630
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: indicspecies
Relationship Between Species and Groups of Sites
Papers that mentioned: 218
cran: pamr
Pam: Prediction Analysis for Microarrays
Papers that mentioned: 63
cran: pls
Partial Least Squares and Principal Component Regression
Papers that mentioned: 137
cran: reshape
Flexibly Reshape Data
Papers that mentioned: 123
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: caret
A Python Interface to Asterisk
Papers that mentioned: 630
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: pls
`pls` is a prettier and powerful `ls` for the pros.
Papers that mentioned: 137
pypi: reshape
The missing reshape for Python
Papers that mentioned: 123