Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fimmu.2021.602539

https://doi.org/10.3389/fimmu.2021.602539

Cited by: 60
Author(s): Alexander Stewart, Joseph C.F. Ng, Gillian A. Wallis, Vasiliki Tsioligka, Franca Fraternali, Deborah K. Dunn‐Walters
Published: about 3 years ago

Software Mentions 10

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: EnhancedVolcano
Publication-ready volcano plots with enhanced colouring and labeling
Papers that mentioned: 123
bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: rgl
3D Visualization Using OpenGL
Papers that mentioned: 156
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: visNetwork
Network Visualization using 'vis.js' Library
Papers that mentioned: 49
pypi: ACTIONet
ACTIONet single-cell analysis framework
Papers that mentioned: 2
pypi: umap-learn
Uniform Manifold Approximation and Projection
Papers that mentioned: 13