Papers: 10.3389/fimmu.2017.00445

https://doi.org/10.3389/fimmu.2017.00445

Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations

Cited by: 15
Author(s): Michael T. Zimmermann, Richard B. Kennedy, Diane E. Grill, Ann L. Oberg, Krista M. Goergen, Inna G. Ovsyannikova, Iana H. Haralambieva, Gregory A. Poland
Published: over 9 years ago

Software Mentions 16

bioconductor: ImmuneSpaceR
A Thin Wrapper around the ImmuneSpace Data and Tools Portal
Papers that mentioned: 1
Very Likely Science (100)
cran: Epi
Statistical Analysis in Epidemiology
Papers that mentioned: 805
Very Likely Science (85)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
Very Likely Science (100)
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
Very Likely Science (100)
cran: rgl
3D Visualization Using OpenGL
Papers that mentioned: 156
Very Likely Science (100)
cran: rpart
Recursive Partitioning and Regression Trees
Papers that mentioned: 431
Very Likely Science (100)
cran: SuperLearner
Super Learner Prediction
Papers that mentioned: 56
Very Likely Science (100)
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
Very Likely Science (85)
pypi: custom
Custom self carry
Papers that mentioned: 1,363
Very Likely Science (65)
pypi: geoquery
Papers that mentioned: 3
Very Likely Science (65)
pypi: geosearch
GeoSearch searchs and extracts country and city mentions from text
Papers that mentioned: 3
Very Likely Science (85)
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
Very Likely Science (100)
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
Very Likely Science (65)
pypi: language
Basic tools for working with natural language text data
Papers that mentioned: 427
Very Likely Science (65)
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017
Very Likely Science (90)