Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2021.678436

https://doi.org/10.3389/fgene.2021.678436

Cited by: 8
Author(s): Yudong Cao, Hecheng Zhu, Jun Tan, Yin Wu, Quanwei Zhou, Zhaoqi Xin, Zhaoping Wu, Zhipeng Jiang, Youwei Guo, Yirui Kuang, Can Li, Ming Zhao, Xingjun Jiang, Jian Peng, Chao Ren
Published: almost 3 years ago

Software Mentions 7

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: GSEABase

Gene set enrichment data structures and methods
Papers that mentioned: 79

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

cran: ggpubr

'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893