Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2021.648229

https://doi.org/10.3389/fgene.2021.648229

A Benchmark of Genetic Variant Calling Pipelines Using Metagenomic Short-Read Sequencing

Cited by: 13
Author(s): Sergio Andreu‐Sánchez, Lianmin Chen, Daoming Wang, Hannah E. Augustijn, Alexandra Zhernakova, Jingyuan Fu
Published: over 3 years ago

Software Mentions 3

pypi: InSilicoSeq
a sequencing simulator
Papers that mentioned: 17
pypi: ncbi
Python wrapper for the NCBI C++ Toolkit
Papers that mentioned: 30
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071