Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2020.564301

https://doi.org/10.3389/fgene.2020.564301

Cited by: 10
Author(s): Lachlan G. Gray, James D. Mills, Ashton Curry‐Hyde, Sasha Devore, Daniel Friedman, Maria Thom, Catherine Scott, Roland D. Thijs, Eleonora Aronica, Orrin Devinsky, Michael Janitz
Published: over 3 years ago

Software Mentions 9

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'
Papers that mentioned: 164
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
cran: SetRank
Advanced Gene Set Enrichment Analysis
Papers that mentioned: 17
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: CIRCexplorer2
Circular RNA analysis toolkits
Papers that mentioned: 79
pypi: ggplot
ggplot for python
Papers that mentioned: 796