Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fcvm.2018.00167

https://doi.org/10.3389/fcvm.2018.00167

Single Cell Gene Expression to Understand the Dynamic Architecture of the Heart

Cited by: 15
Author(s): Andrea Massaia, Patrícia Chaves, Sara Samari, Ricardo J. Miragaia, Kerstin B. Meyer, Sarah A. Teichmann, Michela Noseda
Published: almost 6 years ago

Software Mentions 8

bioconductor: Oscope
Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq
Papers that mentioned: 11
bioconductor: RUVSeq
Remove Unwanted Variation from RNA-Seq Data
Papers that mentioned: 91
bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in R
Papers that mentioned: 79
bioconductor: TSCAN
Tools for Single-Cell Analysis
Papers that mentioned: 49
cran: LEAP
Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering
Papers that mentioned: 135
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: cyclone
Non-blocking web server for Python. Tornado API as a Twisted protocol.
Papers that mentioned: 3
pypi: SpatialDE
Spatial and Temporal DE test
Papers that mentioned: 14