Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fcell.2020.596679

https://doi.org/10.3389/fcell.2020.596679

Cited by: 77
Author(s): Yang Liu, Xi Zhang, Junjun Zhang, Juan Tan, Jie Li, Zewen Song
Published: over 3 years ago

Software Mentions 16

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: maftools

Summarize, Analyze and Visualize MAF Files
Papers that mentioned: 288

cran: corrplot

Visualization of a Correlation Matrix
Papers that mentioned: 1,077

cran: corrr

Correlations in R
Papers that mentioned: 22

cran: cowplot

Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: ggplotify

Convert Plot to 'grob' or 'ggplot' Object
Papers that mentioned: 7

cran: glmnet

Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607

cran: gmodels

Various R Programming Tools for Model Fitting
Papers that mentioned: 85

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: plot3D

Plotting Multi-Dimensional Data
Papers that mentioned: 47

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

cran: timeROC

Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254

cran: VennDiagram

Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626

pypi: glmnet

Python wrapper for glmnet
Papers that mentioned: 1,607

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893