Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fcell.2020.00790

https://doi.org/10.3389/fcell.2020.00790

The Construction of Bone Metastasis-Specific Prognostic Model and Co-expressed Network of Alternative Splicing in Breast Cancer

Cited by: 4
Author(s): Runzhi Huang, Jian Guo, Penghui Yan, Suna Zhai, Peng Hu, Xiaolong Zhu, Jiayao Zhang, Yannan Qiao, Yu Zhang, Hui Liu, Ling Huang, Jie Zhang, Daoke Yang, Zongqiang Huang
Published: about 4 years ago

Software Mentions 15

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: impute
impute: Imputation for microarray data
Papers that mentioned: 63
bioconductor: preprocessCore
A collection of pre-processing functions
Papers that mentioned: 146
cran: beeswarm
The Bee Swarm Plot, an Alternative to Stripchart
Papers that mentioned: 52
cran: forestplot
Advanced Forest Plot Using 'grid' Graphics
Papers that mentioned: 146
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
cran: survivalROC
Time-Dependent ROC Curve Estimation from Censored Survival Data
Papers that mentioned: 479
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: impute
Gene imputation tools for founder populations.
Papers that mentioned: 63
pypi: Pathway
Pathway is a data processing framework which takes care of streaming data updates for you.
Papers that mentioned: 827