Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.26508/lsa.202101113

https://doi.org/10.26508/lsa.202101113

Statistical guidelines for quality control of next-generation sequencing techniques

Cited by: 1
Author(s): Maximilian Sprang, Matteo Krüger, Miguel A. Andrade‐Navarro, Jean-Fred Fontaine
Published: about 3 years ago

Software Mentions 8

bioconductor: ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges
Papers that mentioned: 145
bioconductor: ChIPseeker
ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
Papers that mentioned: 161
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: graphviz
Simple Python interface for Graphviz
Papers that mentioned: 32
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431