Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.26508/lsa.201800085

https://doi.org/10.26508/lsa.201800085

Transcriptional repression by FACT is linked to regulation of chromatin accessibility at the promoter of ES cells

Cited by: 29
Author(s): Constantine Mylonas, Peter Tessarz
Published: over 6 years ago

Software Mentions 7

bioconductor: ATACseqQC
ATAC-seq Quality Control
Papers that mentioned: 14
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: PePr
Peak-calling and Prioritization pipeline for replicated ChIP-Seq data
Papers that mentioned: 18